Information report for LOC_Os04g32960
Gene Details
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Functional Annotation
- RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.
Homologous
- Hordeum vulgare: HORVU4Hr1G005100
- Setaria viridis: SEVIR_7G056100v2, SEVIR_7G090900v2
Gene Resources
- Pfam: PF00565 PF00567
- UniProt: A3ATH5
- EMBL: AL606610
- KEGG: osa:9269825
- OMA: AGMFYVQ
- InterPro: IPR002999 , IPR016071 , IPR016685 , IPR035437
- PANTHER: PTHR12302 , PTHR12302:SF10
- SUPFAM: SSF50199 , SSF63748
- PROSITE: PS50304 , PS50830
- Gene3D: 2.30.30.140 , 2.40.50.90
- OrthoDB: A3ATH5
- SMR: A3ATH5
Sequences
CDS Sequence
- >LOC_Os04g32960
ATGGTGACCGGTGGCGCCGTGCCGGCGGCGGCGCCGGTGTGGAAGGGGAAAGTGAAGTCCGTCCCGTCGGGAGATACGGTGGTGATCATGGACACATCCAAGGCGGAGGAGGTCATCCCGCCGCCGGAGATGTCCGTCACGCTGTCGTGCATCATCGCGCCCAACCTGGCTCGACGCGGTGGGATGGACGAGCCTTTCGCATGGGAGAGCAGGGAGTACCTGAGGAGGCTCCTCATCGGACAAGACGTCAGGTTTCGAGTAGAATACACTGCTTCTCCCTCGGGCCGCAAATTCGGCATGGTCTTCTTTGCTGAGAAGAATGTCGCTTGCATGGTAGTAGCTGCAGGTCTTGCTAAGGTGAAAGAGCAAGGGCAGAAGGGAGAAATAAGCCCGTATGTTGCTGAGTTGCTAAGGCTGGAGACGATTGCCAGGGACCAAGGCTTAGGCCGTTGGAGCAAGCTTCCTGGCGCTCTTGAGTCGTCAATAAGAGATCTGCCACCATCGACAATTGGAGATGGCAGATCTTTCGATGCCAAGGGTTTCGTTGCTGAAAACAAAGGGAAGAGCTTGGAAGCCATTGTAGAGCATGTTCGCGATGGAAGTACTATTCGTGTGCACTTGATTCCCAGTTTCCTTTATGTCCAAGTTTACGTTGCTGGCGTCCAGGCCCCATCCATGGGAAGACGAGCAACTCCTCCCCCAAATGCTCAAGCTGGAGTTGGCAATGGCGCAGCAAATGGAGAAGCTTCCACTACTCCAGCACCAATGGCAGCAGCACAGAAACTATTGGCATCAGCTGACATTTATTCTGAAGTCCCACCAGACAGGTTTGGACAAGAAGCTAAGCACTTCACCGAGACACGGGTGCTTAACAGAGAAGTGCGGATTGTGATGGAGGGTACAGACAATTTCAACAACATATTTGGTTCAGTTTATTATTCTGATGGGGATGTTGTAAAGGACTTGGCACTTGATCTGGTTCAAAATGGACTCGCAAAGTATGTTGAATGGAGTGCAAATGTGCTTGATCCTCAACTTAAGACAAAGTTGAGGAATGCTGATCTTCAGGTTAAGAAGGAACAGTTAAGAATCTGGACTGGATTTAAGCCCCCGGTGACAAACACAAAGCCAATTCACAACCAAAAGTTCACAGGAAAAGTGATAGAGGTTGTGAACGGGTACTGCCTAGTCATCGCTGATGACGCTGAACCTTATGGCAGTCCTTCAGCAGAACGCCGAGTTAATCTTTCAAGCATCAGACCCCCCAAGTTTGAAAAGCCTTCAGAGGAGAACAAATCCTCTGAACAATTTGCTCGCACAGCAAAGGAATTCCTGCGCACAAGACTGATTGGAAAACAAGTCAACGTCTCAATGGAGTACTCGAGGAGGATCAACATTGCAGACGGACAGATTGCTGGCCCGAGAACTAACTCGACTGAAACCAGAGTTTTGGAGTACGGGTCGGTGTTCCTTCCCAGCTCATCGCATGCTGATGGAGAAACCGCTACTAGTAGCTCGGACAGCAGCAATAATCAGCTCGGGATCAACGTTGCGGCGCTGCTGGTCTCGCGCGGATTAGCCGACATCACCAGGCACCGTGACTACGAGGACAGGTCGCATCACTACGATGCTCTCATAGCTGCCCATGCGCGAGCTGAGAAGACGAAGAAAGGCTACCACTCCAAGAAGGAGTGCCCTCCTATTCATATGACAGATTTGACGAGGGTACCCAAAAAGGCGAAGGAATTCCTTCACCTGTTGCAACGCAGCAGGAGGCATTCCGCAATTGTTGAGTACGTTTTCAGCGGCCATCGTTTCAAAGTGACGATCCCTAAAGAGACTTGCACCATTGCATTCGCGCTTTCTGGTGTTCGGTGCCCCGGTAGAGATGAGCCCTACTCTGATGAGGCCATCACAATGATGAGGAGAAGGATATTACAACGGAATGTCGAGATTGAGATCAACACAGTTGATAGAACTGGAACATTCTTAGGTTCCTTATGGGAATCTAATATCAATGTGGCTTCGGTTCTTTTGGAGGCTGGTCTTGCTAAGATCAGCTCATTTGCAGTGGATAAGATGCCAGATGCTCAGGTTCTCTTAAAGACTGAAAAAATTGCAAAGCAAAAGAAATTGAAGGTATGGGAGAACTACGAGGAAGTTGAAGTTTCCAACGTCTCTCTTTATGATAATAAAGAGACTCTAAAGGTTATTGTCACTGAAGTGCTAGGTGCTGGAATGTTTTATGTCCAAGCACTTGCTGATGAACATGTGGAGTTCGTACGTCATCAGCTTGCTTCTTTAGACATTAAGGATGATCCAGCTGAAGCTTTAGAAGTGAAAGAGCTGGAAACTTCAAAAGAGGTTGCTACTTTGACAAAAGATTTACCTGAAACTTTGGATGCCGAAGACCCATCTTCTGATGTGGCTAAGGATGAATCAGTAACTTCTAAGGATATAGACCCATTACCAGATGATTCAAACACAGCTCCATTTACTCCTATGAAGGGAGAAATGGTGCTTGCATTGTTCCGCTGCGACAATTCATGGAACAGAGCCATGATTATAGGTGAGTGTCAGGGAGTTGAAGGACCTGAGTTTGAAGTATTTTACATTGACTATGGAAACCAAGAACTTGTTCCTCACAGTTGCCTGAGACCTATCAATCTATCCATTTCCTCTATTCCTCCCCTTGCAAAGCTGTGCAGCCTTGCCTTTGTGAAGGTGCCCAGTCTAAATGACTATCTTGGGCAAGAGGCAGCTATGTATCTGAACAGTATCTTGCTTGACAATGGGAGAGAATTTGAGGCTATTGTCGAAGAGCGAGATGCTGCTTCGGGAGGGAAATTGCAGGGTCAGGGAACCGGAGAAATCCTCGGCGTGACTCTACTCGATAGTGAGACCGACAATAGCATCAATGCTGAGATGCTAGAGAGAGGGTATGGTCAACTTGAGAGGAGGAGATGGGACTCGAGGGAGAGGAGGGCAGCCATCAAGAAGCTTGAGGAATTCCAGGAGGTAGCAAGGAAGGAGCAGCTAGGCGTCTGGTGCCCAAAGAATGCAAGGAAGCAGGGCATGGATGAAAACGAGTACCCTGTCCTGGCCAGAGCACCACCTCCCCCAAAGAAGGGATATGACCTGATCAAGTTCATTGCGTCCCGGTCCGAC
Protein Sequence
- >LOC_Os04g32960
MVTGGAVPAAAPVWKGKVKSVPSGDTVVIMDTSKAEEVIPPPEMSVTLSCIIAPNLARRGGMDEPFAWESREYLRRLLIGQDVRFRVEYTASPSGRKFGMVFFAEKNVACMVVAAGLAKVKEQGQKGEISPYVAELLRLETIARDQGLGRWSKLPGALESSIRDLPPSTIGDGRSFDAKGFVAENKGKSLEAIVEHVRDGSTIRVHLIPSFLYVQVYVAGVQAPSMGRRATPPPNAQAGVGNGAANGEASTTPAPMAAAQKLLASADIYSEVPPDRFGQEAKHFTETRVLNREVRIVMEGTDNFNNIFGSVYYSDGDVVKDLALDLVQNGLAKYVEWSANVLDPQLKTKLRNADLQVKKEQLRIWTGFKPPVTNTKPIHNQKFTGKVIEVVNGYCLVIADDAEPYGSPSAERRVNLSSIRPPKFEKPSEENKSSEQFARTAKEFLRTRLIGKQVNVSMEYSRRINIADGQIAGPRTNSTETRVLEYGSVFLPSSSHADGETATSSSDSSNNQLGINVAALLVSRGLADITRHRDYEDRSHHYDALIAAHARAEKTKKGYHSKKECPPIHMTDLTRVPKKAKEFLHLLQRSRRHSAIVEYVFSGHRFKVTIPKETCTIAFALSGVRCPGRDEPYSDEAITMMRRRILQRNVEIEINTVDRTGTFLGSLWESNINVASVLLEAGLAKISSFAVDKMPDAQVLLKTEKIAKQKKLKVWENYEEVEVSNVSLYDNKETLKVIVTEVLGAGMFYVQALADEHVEFVRHQLASLDIKDDPAEALEVKELETSKEVATLTKDLPETLDAEDPSSDVAKDESVTSKDIDPLPDDSNTAPFTPMKGEMVLALFRCDNSWNRAMIIGECQGVEGPEFEVFYIDYGNQELVPHSCLRPINLSISSIPPLAKLCSLAFVKVPSLNDYLGQEAAMYLNSILLDNGREFEAIVEERDAASGGKLQGQGTGEILGVTLLDSETDNSINAEMLERGYGQLERRRWDSRERRAAIKKLEEFQEVARKEQLGVWCPKNARKQGMDENEYPVLARAPPPPKKGYDLIKFIASRSD