Information report for Kaladp0072s0008.v1.1
Gene Details
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Functional Annotation
- Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs.
Homologous
- Arabidopsis thaliana — AT1G01040
Gene Resources
- Pfam: PF00271 PF02170 PF04851 PF00636
- UniProt: A0A7N0UKV6
- OMA: HPRTHAF
- InterPro: IPR001650 , IPR003100 , IPR005034 , IPR011545 , IPR014001 , IPR027417 , IPR038248 , IPR051363
- PANTHER: PTHR14074 , PTHR14074:SF16
- SUPFAM: SSF52540
- PROSITE: PS50821 , PS51192 , PS51194 , PS51327
- Gene3D: 2.170.260.10 , 3.30.160.380 , 3.40.50.300
- CDD: cd18034 , cd18802
Sequences
CDS Sequence
- >Kaladp0072s0008.v1.1
ATGGATACAGACGGTGAGACTAGGGTTTCCGTTGGACCTGGATCCCCTGCTCCTCACACAACCACTCCTTCTTACTGGCTCGATGCCTTCGATGACATTGCTACCCATCTTATGGATTTTGGGACTCTTCACACACTCCCTGCTTCTCCCCATTCCATTCACTCTTCCCAAGCTGCTGTCCACCCCGACATGATTCAACTTGTTTTTGACGGGCCAGTTGACACTTCACAGTCTGCAATCACCAATGAATGGATGCCCAAGGATCCTACTTCCAGAGCCACTCTGACCCCTCACACATATAGAGAAAACAGACAGGACATCCTCCAACATCAGGACAAAGTGGTCGTTCATTCCTCCAAAATCAACCGCTCTCGCCCAAGGCAAGACTTTGAGACAAAGCACGAATTGGAAGAGACCAGGCCTAAGAAGCCCCACCTCAGTGACTGCAATACTGCTAGGAATTCCTCAAGAAGGGATCATTGCCAGCCAACTGTCAGGGACAAATTATTTAATAGAAACTGGCAGCGAGATTGTCGGGATGAAGCTGCTAAAAGGGACTGGCGCCACTGTAGTGATTATAATCATCTTAGTAAGAGAAGGGAGCACCAGAATGGTGGCAGGAGAGACTTGAGAGAAAGGGATTTCAGAGACGCTAGGGGTTATTGGGAAAGGGATAGGTCTGGATCTAATGAGCTAGTTTTTCGCCAGGGCCCTTGGAAACCTGATTTCGTCAAAGAGAGTAAGCTGTTACAGGTTAACGCCTTTAGGTCCAACGGTGAGCTGGAGAAGAAACTGGAGATGCCAAAGCAGAAATTCCCAGAGGAGAAAGCCCGCCAATATCAATTAGATGTCCTTGAGCAGGCTAGAAACAAAAATACGATTGCATTTCTGGAGACAGGGGCGGGGAAGACACTCATAGCTGTCCTTCTTATTAAAAGTATCAATGATGAAATGAAAAGGCTTGATAAAAAGATGCTAGCTGTATTTTTAGTACCCAAAGTACCCCTCGTTTACCAGCAAGCAGAGGTTATACGGCTACAGACAGGCTTCCAGGTGGGACATTACTGTGGGGAAATGGGCCAAGACTTTTGGGATGCAAGAAGATGGCACCGTGAATTTGAAACTAAGCAGGTCCTTGTTATGACGGCTCAGATCCTTTTAAACATCCTCCGGCACAGTATAATTAAAATGGAAGCAATTAGTCTTCTTATTTTAGATGAGTGTCATCATGCTGTGAAGAAACATCCATATTCGTTGGTCATGTCCGAATTCTATCATACAACCCCAAAAGAAAAGAGACCATCTGTATTTGGCATGACAGCATCTCCAGTTAATTTGAAGGGTGTATCAAGTCAAGTTGATTGCGCAATAAAAATCCGCAATCTTGAAAGTAAGCTTGATTCTGTTGTATGTACTATTAAAGATCGTAAGGAGCTAGAGAAACATGTTCCAATGCCTTCAGAAGTTGTGGTGGAGTATGACAAAGCGGCAACCTTGTGGTCATTACAAGAACAAATAAAACAAATGGAACTGGATGTAGAACAAGCAGCTAAAGCAAGCTTGAGGAAAAGTAAATGGCAGTTTATGGGAGCTAGAGATGCTGGGGCAAAGGAAAAGATGCGTCAAGTTTATGGTGTATCTGAAAGAACGGAGAGCGATGGTGCTGCTAATCTGATTCAAAAACTGAGGGCGATTAATTACTCTCTTGATGAACTTGGTCAGTGGTGCGCTTACAAGGTTGCACAATCATTTCTGGTAGCTCTACAAAACGACGAGAGAGCTCATTATCAGTCAGATGTTCAATTTCAGGAGTCTTACCTTAGCAAAGTTGTCACTCTTTTGCAATGCCAATTATCAGAGGGAGCTGCTTCTGATACAGATACAAATGGGGGCTTGTCTGTGTCTGTTGCTCACAATGAGAATATTGAGGAAATGGAGGAGGGAGAACTTCCCAACAGTCATGTTGTTTCTGGTGGAGAGCATGTGGATGTCATTATTGGAGCTGCGGTGGCTGATGGAAAAGTGACACCCAAAGTACAGTCACTGATTAAAATTCTTCTTAAGTATGAGCATACTGAAGACTTCAGTGCAATTATATTTGTTGAGCGAGTTGTGGCTGCATTAGTTCTTCCAAAGGTTTTTGCTGAGCTTCCTTCTCTGAGTTTTGTTAAATGTGCTAGCTTGATTGGACACAATAACAGTCATGAGATGCGAACAAGCCAGATGCAAGATACAATCACCAGATTTCGAGATGGACGAGTCACGTTGCTAGTAGCTACTAGCGTGGCTGAAGAGGGACTTGATATACGACAATGCAATGTCGTCATTCGATTCGACCTCGCAAAAACTGTTCTGGCCTACATTCAGTCTAGAGGTCGAGCCAGAAAACCTGGGTCTGATTATATCTTAATGTCTGAAAGGGGAAACTTATCACATGCAGCATTTTTGAAAAATGCTAGAAATAGTGAGGAAACTTTGAGAAGAGAAGCAGTTGAACGAACAGACCTCAGTTGTGTTAAAGATGTATCAAAGTTGGTATTGATGGATAACATACCAGGTATAGCATACCAGGTTGAGTCGACTGGCGCTGTTGTAACATTGAATTCTGCTGTTGGGCTTGTTCACTTATACTGCTCTCAGTTACCAAGTGATAGGTATTCCATTCTTCGCCCGGAATTCATAATAGAAAAGCATGACAAACCTGGAGGGGTTTTGGAGTATGCCTGTAGACTTCAACTCCCATGCAATGCACCATTTGAAAAACTTGAGGGCCCTGTGTGCAGTTCACCGCGCCTTGCACAACAGGCTGTATGTGTTGCTGCCTGCAAGAAGCTTCATGAGATGGGTGCATTTACTGATATGCTCCTACCAGACAAGGGGAGCAAGCAGGAAGGAAACACAGACCAGAGTGATGATGGAGATCCTCTCCCCGGTACTGCTAGACATCGAGAGTTCTATCCTGAGGGTGTAGCCAATATTCTGCAGGGTGATTGGATTTTATCTGGTAAAGAAAGTTGTATACACTCGAAGTCAGTTCATGTTTATATGTACGCTGTTCAGTCAGAGAACATTGGTTCATCAAATGATGCGTTCGTAACTCATGTTTCGGAGTTTGCAATATTGTTCGGCCAAGAACTGGATGCAGAGGTGTTATCGACATCGATGGATCTCTTTGTCGCTCGAACCATGAAAACTAAGGCATTTCTCGTCTTTCAGGGCCTGATAGACATAACTGAAAGTCAGTTGGCATCCCTTAAGAACTTTCATGTAAGACTTATGAGTATTGTATTGGATGTGGATGTTGAACCTTCAACTACTCCATGGGATCCAGCCAAGGCATATCTGTTTGTCCCTGTGGTTTGCGATAAAAAGTCTGATCCTAGGAAGCATATTAATTGGATGCTAGTGGAAGATATTGTGAGCTCAGATTCTTGGAATAATCCCCTTCAGAGGGCAAGGCCTGATGTTTTCCTTGGCACGAGTGAACGGACACTAGGTGGTGATCGTAGGGAGTATGGGTTTGGAAAATTGCGACATGGTATGGCCTTTGGACAGAAGCCTCATCCTACATATGGAATCAAGGGAGCGGTGGCAAAATTTGACGTTGTGAAAGCTTACGGATTGCTGCCGAGTCAGGCATCTGTGGAAGTGTCGCAAGTACCAGTTAGATCTAGGGATTCATTGATGACTGCTTATGGCTGCATCAGCGACAAAGATCTGATTGGGAGAATTGTTACAGCTGCTCATTCAGGGAAACGGTTTTATGTGGATTCTATATGCTATGACATGAGTGCGGAGTCTTCATTCCCAAGGAAGGAAGGATATCTTGGTCCTGTAGAGTACAGTTCATATGCTGAGTATTACAGGCAAAAGACAAGGTAG
Protein Sequence
- >Kaladp0072s0008.v1.1
MDTDGETRVSVGPGSPAPHTTTPSYWLDAFDDIATHLMDFGTLHTLPASPHSIHSSQAAVHPDMIQLVFDGPVDTSQSAITNEWMPKDPTSRATLTPHTYRENRQDILQHQDKVVVHSSKINRSRPRQDFETKHELEETRPKKPHLSDCNTARNSSRRDHCQPTVRDKLFNRNWQRDCRDEAAKRDWRHCSDYNHLSKRREHQNGGRRDLRERDFRDARGYWERDRSGSNELVFRQGPWKPDFVKESKLLQVNAFRSNGELEKKLEMPKQKFPEEKARQYQLDVLEQARNKNTIAFLETGAGKTLIAVLLIKSINDEMKRLDKKMLAVFLVPKVPLVYQQAEVIRLQTGFQVGHYCGEMGQDFWDARRWHREFETKQVLVMTAQILLNILRHSIIKMEAISLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKGVSSQVDCAIKIRNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAATLWSLQEQIKQMELDVEQAAKASLRKSKWQFMGARDAGAKEKMRQVYGVSERTESDGAANLIQKLRAINYSLDELGQWCAYKVAQSFLVALQNDERAHYQSDVQFQESYLSKVVTLLQCQLSEGAASDTDTNGGLSVSVAHNENIEEMEEGELPNSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYEHTEDFSAIIFVERVVAALVLPKVFAELPSLSFVKCASLIGHNNSHEMRTSQMQDTITRFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMSERGNLSHAAFLKNARNSEETLRREAVERTDLSCVKDVSKLVLMDNIPGIAYQVESTGAVVTLNSAVGLVHLYCSQLPSDRYSILRPEFIIEKHDKPGGVLEYACRLQLPCNAPFEKLEGPVCSSPRLAQQAVCVAACKKLHEMGAFTDMLLPDKGSKQEGNTDQSDDGDPLPGTARHREFYPEGVANILQGDWILSGKESCIHSKSVHVYMYAVQSENIGSSNDAFVTHVSEFAILFGQELDAEVLSTSMDLFVARTMKTKAFLVFQGLIDITESQLASLKNFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPVVCDKKSDPRKHINWMLVEDIVSSDSWNNPLQRARPDVFLGTSERTLGGDRREYGFGKLRHGMAFGQKPHPTYGIKGAVAKFDVVKAYGLLPSQASVEVSQVPVRSRDSLMTAYGCISDKDLIGRIVTAAHSGKRFYVDSICYDMSAESSFPRKEGYLGPVEYSSYAEYYRQKTR