Gene Details:
- Gene ID: Jr06_20160
- Suggest Gene Name: DICER-LIKE 4
- Description: putative flowering gene
- Species: Juglans regia
- Source: Putative flowering gene from PlantCFG
Protein Features:
Functional Descriptions:
- Encodes an RNase III-like enzyme that catalyzes processing of trans-acting small interfering RNA precursors in a distinct small RNA biogenesis pathway. The protein is also involved in the production of 21-nt primary siRNAs from both inverted-repeat constructs and endogenous sequences, as well as the RDR6-dependent 21-nt secondary siRNAs involved in long-range cell-to-cell signaling. It binds DRB4, a ds-RNA binding protein.
Homologous
- Arabidopsis thaliana — AT5G20320
Sequences:
CDS Sequence
- >Jr06_20160
ATGCCAGACGGCGAAGTGTCCGGCGGAGCCGATCATCTTATGGCCGTTGCTACGACTTTTTGCGCTACCACCACCTCGCCGCCCGTGGAACGGTCTTTGGGTGTTTCTGGTGTTTATGAAGATGGACAGGAACCACGTTCAAGTGCTCAAGGGACTGGAAAAGACCCCAGAAAGATCGCGAGAAAGTACCAGTTGGAGCTATGCAAGAAAGCTTTGGAGGAGAACATAATTGTTTATTTGGGGACAGGTTGTGGGAAGACCCACATTGCCGTGCTGCTTATATACGAACTTGGTCACTTAATAAGGAATCCCCAGAAGAATGTATGTATTTTTCTCGCTCCAACAGTGGCTCTGGTTCAGCAGCAAGCCAGGGTCATAGAAGACTCTATTGATTTCAAGGTCGGGATCTATGGTGGGAGCTCTAAGCATTTGAAAAGCCATGAAGACTGGAAAAAAGAGATTGAACAGTATGAGATTCTTGTTATGACGCCTCAAATACTTCTGCGTAACTTATACCACTGCTTTATCAGGATGGAGTTAATTGCACTCCTGATATTTGACGAGTGTCATCATGCTCAAATCAAAACAAACCATCCTTATGCAAAAATCATGAAACTCTTCTACAAAACCAATGTTGGAAAAAATCCCCGTATTTTTGGCATGACTGCATCTCCAGTTGTGGGAAAAGGTGCTTCCGATCAAGCAAATTTACCAAAAAGCATCAATAGCCTTGAAAACTTACTCAATGCAAAGGTTTACTCCGTTGAAGATAAGGGAGAATTGGATAATTTTGTAGCGTCTCCTATAGTTAGAGTATATTATTATGGTTCCGTTACAAATGAGGGATCCAGCTCCCATTTGACATACTGTAGTAAACTTGAGGAGATGAAACGTCAGTGCATAACAACACTTAGTATGAAGATAAATGATCATCAAAAGCTACGGAAATCGAAGAAGCTACTAACAAGAATGCAGGATAAGATGTTATTCTGTTTGGAAAACCTTGGCCTTTGGGGAGCATTACAAGCTAGCCGTATTCTTTTGACTGGTGATCACTCTGAGCGGAATGAATTAATAGAGGTGGAAGGAAATTTCAGTGATGATTCTGCATGCGATAGATATCTAGCTCATGCTGCTGAAGTCTTTGCTTCTGAATGTATGAAAGATGGTGCTTCATCTGATCTGTCACGTGTAGAGGTCTTAAAGGAGCCATATTTTTCAAGAAAGCTTTTACGCCTTATTGGAATTCTTTCATCCTTCAGGTTACAACCAAATATGAAGTGTATAATATTCGTAAATAGGATTGTAACTGCGAGATCCTTGTCGTGCATGCTACAGAAGCTTAAGTTTCTAGCTTTTTGGAAGTGTGATTATCTTGTTGGAGTCCACTCTAAAATAAAAAGTATGTCGCGGAAGACCATGAACAATATTCTTGATAGATTCCGATCTGGAGAGTTAAATCTTTTGGTTGCGACTAAAGTTGGTGAAGAAGGGCTGGATATTCAGACATGCTGCCTTGTGATTCGGTTTGATCTTCCAGAAACTGTTTCTAGCTTCATACAATCGAGAGGTCGTGCACGGATGCCTCAGTCTGAATATGCCTTTTTGGTGAACAGTGGCAACCAGAAAGAGCTAGATTTGATAGAAAATTTTCAAAAAGATGAAGATCGAATGAACATGGAAATTGCTCATCGAACATCAAATGAAACTTTTTTGGGTTCTGAAGAAAGAATTTATAAAGTCGATTCATCTGGTGCTTCTATCAGCTCTGGATATAGCATCTCATTACTCTACCAGTATTGTGCAAAACTACCACATGATGAGTATTTTAACCCCAACCCGGAGTTCTTTTATTTTGATGACTTGGGGGGTACTGTCTGCCATATCAATTTACCTTCCAATGCTCCAATAAACCAAATAGTTGGTACACCACAATCTTCATTGGAAGCTGCTAAACAAGATGCTTGTCTGAAAGCAATTGAAAGTTTGCATAAAATGGGTGCCTTGAATGACTATCTCTTGCCTGGGGTAGATGATGCATATATAGATGAAGTGGGGTTGGATTCTTCTAACTCAGATAGCTGTGCAGATGAGAGTTCACGACAAGAACTCCATGAGATGCTTGTGCCTGCTGCCCTAAAGGGACCGTGGACTAATTCGGAAAATCCCGTCCGTCTTAGTTCTTACTATATAGAATTTTGTCCTGATCCCAAGGATAGGATCTATAAAAAGTTTGGTTTATTTGTCAAAGCACCTCTCCCACTAGAGGCTGAGAGAATGGAACTTGATCTTCATCTGGCTCGTGGTAGATCTGTGATGACAAAGTTGGTTCCATCTGGAGTTGCAGAATTCAATCAAATTGAGATTACGTTAGCCAAGAATTTTCAAGAAATGTATCTCAAGGTCATCCTTGACAGATCAGAATTTATTCCTGAACCTGTTTCGGTGGGAAAGAATGATATTTTTATGTCAAGTTCCTTAACCTTCTACCTGTTGCTTCCTGTAATTTTGCATGATAATGAGAGCAAGATTGCTGTAGATTGGAAAATTATTCGTAGATGTTTATCGTCCCCAGTTTTCCGGACTCCAGAAGATGCCATGGTCGAAAAATATCCTTTGGGTGTTTATCTGCAACTTGCCAATGGTTGCAGAAGTAGAAGTGATGTTGAGAATAGTCTAGTGTATGCCCCATACAAAAATGAGTTTTACTTTATTACTAACATCATTCATGGAATGAATGGATACAGCCCTTGTAAGGACTCAGAAACTTCAAGCTACGCAGAGCGCTTATATGAGAAGTTTGGGATTGAGCTTGAGTACCCTGAACAACCTTTTCTGAATGCGAAACCACTTTTTTGCTTGCGTAACTTGCTCTGCAACCGAAAGCCAGAGGATTCAGAATCGCATGAACTGGAGGAATACTTCATTGATTTGCCTCCTGAGCTATGTCAGTTGAAGATCATAGGCTTTTCAAAAGATATCGGGAGTTCAATATCTTTGTTACCATCAATCATGCATCGACTGGAAAACTTGCTTGTGGCCATTGAACTGAAGCAAACCTTTTCTTCTGCATTCCCAGAAGGAGCTGAAGTTACATGCCATCGACTTCTAGAAGCAATCACCACTGAGAAGTGCCAGGAGCGCTTTTCCCTCGAAAGACTTGAAATACTTGGTGATGCTTTTCTCAAATTTGCTGTTGGACGGCACCTTTTTATTTTGCATGGTACTCTTGATGAAGGAGAACTTACAAGGAAACGTTCTCATGCTGTGAACAATTCCAATTTGTACAAGCTAGCCACTAGGAGCAAGTTACAGGTCTACATCCGTGATTATTCGTTGGATCCCTGCCAATTCTTTGCTCTGGGCCGCCCTTGCCCAATAATCTGCAACAAGGAGACAGAAGCAGCTGTTCATTTCCAGCATTCAAGTGGTCTAGCAGATCATGCAAGTTCCAGTCCAACTAGATGCTGTAGAGGTCACCACTGGCTTCATAAGAAAACAATCGCTGATGTGGTTGAAGCTCTTGTTGGAGCGTTCATAGTTGATAGTGGCTTCAGAGCTGCAATTGCATTTCTTCGATGGATTGGAATACAGGTAGATTTTGAAGCCTCACAAGTTTCTAAGGCCTGCATAGCAAGCACTAGCTACATCCCGCTTGCTACTTCTTTGGACATTCCTTCCCTTGAAAATTTGTTAGGGTATCAGTTTCTCCATAGAGGTCTGCTTATACAGGCATTTGTACATCCTTCGCACAACAAAAATGGAGGAGGCTGCTATCAGAGATTGGAGTTTCTTGGAGATGCTGTCTTGGATTACTTAATTACATCATATCTTTATTCAGCTTATCCAAAATTGAATCCTGGTCAATTGACAGATTTGAGATCTGTGTTGGTGAATAATGAGGCATTTGCCAATCTTGCGGTAGAACGATCCTTCCACAAATTTCTTATATGTGATTCCAGTAGCCTTACTGAGGCAATTGAGATGTATGTGGATGCTGTTAAAATGCAAGCGCCTGAAGGGAGTCTTCTTGAGGGGCCAAAATGTCCGAAGGCTTTGGGTGACTTGGTAGAGTCTTCTCTAGGTGCCATTCTTCTTGATTCAGGGTTTAATCTGAGGCTTATGTGGAAGATAATGCTTTCCTTTTTGGATCCAATCATGAGGTTCTCCAGTTTGCAGATTAGTCCTTTCAGGGAACTGCAAGAACTTTGCCAATCTTATAATTGGGATCTGCAGTTGTTAACATCAGAGAAGGGTGGAATGTCTCTGGTTGAAGCACAAGTGAATGGAAAAGATGTTTGTGCAACTGCCTCTGCAACATACCGAAACAAGAAAGATGCTACTAGGATCGCTTCGCGAAAAATATCCACAATTTTGAAGGCTCAAGGCTACATACCGAAGTCAAAAACTTTGGAGGAAGTTTTGAATTCAAGCTGCAAGATGGAAGCCAGACTGATTGGATATGATGAAACACCTATAGATGTAAATACCCCTGATGCAATTGGATTTGAGAAGTTGACGGTACAACAGCCTTTTGACAGAGATTTTGAGCCAAAAATTCTAGCCCTCACTAAAGTATCCGATAGTAATCCCCCATGCGTAACACCTGTTGTTAGACACCCACCTGGCACCATAAGTGGGCAGGCTTGCAGGACAGCTGAAAATCCAAGCTGTGATCCTGACCTACAGCCCACAGGTGGGTCAAACAAAGCAACGGCAAGATCACGATTGTATGAAGTCTGTGCTGCTAACTGTTGGAAAGCCCCTCTATTTGAATGTTGCAGAGAGGAAGGACCAAGCCACTTAAAGTTATTCACTTTCAAGGTGATTGTGGAAGTAGAAGCCCCAGATGTTATTTTGGAGTGCTTGGGAACACCGCAGTCGAAAAAGAAAGATGCAGCAGAGCATGCAGCAGAAGGAGCCCTTTGGTACTTAAAGCACCAAGGGTTGTTTCTTGAGAGCGACTGA
Protein Sequence
- >Jr06_20160
MPDGEVSGGADHLMAVATTFCATTTSPPVERSLGVSGVYEDGQEPRSSAQGTGKDPRKIARKYQLELCKKALEENIIVYLGTGCGKTHIAVLLIYELGHLIRNPQKNVCIFLAPTVALVQQQARVIEDSIDFKVGIYGGSSKHLKSHEDWKKEIEQYEILVMTPQILLRNLYHCFIRMELIALLIFDECHHAQIKTNHPYAKIMKLFYKTNVGKNPRIFGMTASPVVGKGASDQANLPKSINSLENLLNAKVYSVEDKGELDNFVASPIVRVYYYGSVTNEGSSSHLTYCSKLEEMKRQCITTLSMKINDHQKLRKSKKLLTRMQDKMLFCLENLGLWGALQASRILLTGDHSERNELIEVEGNFSDDSACDRYLAHAAEVFASECMKDGASSDLSRVEVLKEPYFSRKLLRLIGILSSFRLQPNMKCIIFVNRIVTARSLSCMLQKLKFLAFWKCDYLVGVHSKIKSMSRKTMNNILDRFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVNSGNQKELDLIENFQKDEDRMNMEIAHRTSNETFLGSEERIYKVDSSGASISSGYSISLLYQYCAKLPHDEYFNPNPEFFYFDDLGGTVCHINLPSNAPINQIVGTPQSSLEAAKQDACLKAIESLHKMGALNDYLLPGVDDAYIDEVGLDSSNSDSCADESSRQELHEMLVPAALKGPWTNSENPVRLSSYYIEFCPDPKDRIYKKFGLFVKAPLPLEAERMELDLHLARGRSVMTKLVPSGVAEFNQIEITLAKNFQEMYLKVILDRSEFIPEPVSVGKNDIFMSSSLTFYLLLPVILHDNESKIAVDWKIIRRCLSSPVFRTPEDAMVEKYPLGVYLQLANGCRSRSDVENSLVYAPYKNEFYFITNIIHGMNGYSPCKDSETSSYAERLYEKFGIELEYPEQPFLNAKPLFCLRNLLCNRKPEDSESHELEEYFIDLPPELCQLKIIGFSKDIGSSISLLPSIMHRLENLLVAIELKQTFSSAFPEGAEVTCHRLLEAITTEKCQERFSLERLEILGDAFLKFAVGRHLFILHGTLDEGELTRKRSHAVNNSNLYKLATRSKLQVYIRDYSLDPCQFFALGRPCPIICNKETEAAVHFQHSSGLADHASSSPTRCCRGHHWLHKKTIADVVEALVGAFIVDSGFRAAIAFLRWIGIQVDFEASQVSKACIASTSYIPLATSLDIPSLENLLGYQFLHRGLLIQAFVHPSHNKNGGGCYQRLEFLGDAVLDYLITSYLYSAYPKLNPGQLTDLRSVLVNNEAFANLAVERSFHKFLICDSSSLTEAIEMYVDAVKMQAPEGSLLEGPKCPKALGDLVESSLGAILLDSGFNLRLMWKIMLSFLDPIMRFSSLQISPFRELQELCQSYNWDLQLLTSEKGGMSLVEAQVNGKDVCATASATYRNKKDATRIASRKISTILKAQGYIPKSKTLEEVLNSSCKMEARLIGYDETPIDVNTPDAIGFEKLTVQQPFDRDFEPKILALTKVSDSNPPCVTPVVRHPPGTISGQACRTAENPSCDPDLQPTGGSNKATARSRLYEVCAANCWKAPLFECCREEGPSHLKLFTFKVIVEVEAPDVILECLGTPQSKKKDAAEHAAEGALWYLKHQGLFLESD