Information report for Jr06_11970
Gene Details
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Functional Annotation
- Encodes a 237-kDA protein with similarity to vertebrate Tpr, a long coiled-coil proteins of nuclear pore inner basket filaments. It is localized to the inner surface of the nuclear envelope and is a component of the nuclear pore-associated steps of sumoylation and mRNA export in plants. Mutations affect flowering time regulation and other developmental processes. Probably acts in the same pathway as ESD4 in affecting flowering time, vegetative and inflorescence development.
Homologous
- Arabidopsis thaliana — AT1G79280
Gene Resources
- Pfam: PF07926
- UniProt: A0A833XMS5
- EMBL: LIHL02000006
- InterPro: IPR012929
- PANTHER: PTHR18898 , PTHR18898:SF2
Sequences
CDS Sequence
- >Jr06_11970
ATGCCTCTCTTCCTCTCGGAGGAAGAGTTCTCGCGCTGCGCGAACGACGCTTTTGCGGTGGCGGAGAAGGCCGACGCGTTCATCAGCCAGCTGTATAAGGAGCTCGAGACCGTGAGGGCTCAGGCTGATGCCTCCGCCATCACCGCCGAGCAGACCTGCTCGCTCCTCGAGCAGAAGTACCTCTCCCTCTCCGCCGAATTCTCGAAGCTCGAGTCGGACAACGCACAGCTTCACTCCTCCCTCGATCATCACCTCTCCGACCTGGCCCAAGTCCAGGCCCAAAAGCATCAACTTCATTTGCAATCTATTGGCAAGGATGGCGAGATAGAGAGATTGACAACGGAGGTGTCAGAGTTGCATAAGTCGAAAAGGCAGCTGATAGAGTTGGTGGAGCAGAAGGATTTGGAGATAAGCGAGAAGAATGCCACGTTTAAGAGCTATCTTGATAAGATTGTCAACTTATCCGACACTGCCGCGCAAAGGGAGTCCCGTGTGAGTGAAATTGAGGCTGAGTTGTCGCGTGCTCAGGCTACATGTTCTCGTCTTTCACAGGAGAAAGAACTTATTGAGAGGCATAATGTCTGGCTGAATGATGAGTTGACTGACAAAGTTGATAATCTCACTGAGCAACGTAGAAAATATAATGATCTTGAGGCTGATATGTCCGCTAAGCTTGCAGATATCGAGAGGCAATCCAATGACTGCTCTAGTTCATTACAATGGAACAAGGAAAGAGTGAGGGAGCTAGAAACAAAACTAACATCGTTGCAAGAGGAACTGTGTTCATCTAAACTTACTGCTGCTGCCAATGAAGACCGATTATCTGCTGAACTCTCAACAGTAAATAAGCTTGTTGAACTATATAAAGAAAGTTCTGAGGAATGGTCCAAGAAGGCGGGAGAGCTTGAGGGTGTCATTAAAGCTCTAGAGGTGAATTGCTCTGCCAATCAGACACATTTGAGTCAAGTTGAAAATGATTACAAAGACAGACTTGAAAAGGAAGTATCTGCAAGATGCCAATTTGAAAAGGAGGCTGCAGATCTGAAAGCAAAGCTTGAAAAATGTGAAGCTGAGATTGAGAATAGTAGAAAATCAAATGAACTAAATCTTCTTCCACTCAGCAATTTCAGTACTGAAATATTGATGAATTCTTTCGAAACAAATGATGTGGTTGAGGATGCTCACATGATTGTCCCCAAGATTCCAGCAGGTGTTTCCGGAACAGCCTTGGCAGCTTCACTCCTGCGTGATGGTTGGAGTCTGGCTAAAATGTATTCACAATATCAAGAGGCTGTTGATGCCCTAAGACATGAGCAGTTGGGAAGGAAGCAGTCTGAGGCCATTTTGCAACGGGTCTTATATGAATTAGAGGAGAAAGCTGAAGTCATTTTGGACGAAAGAGCGGAACATGAGAGACTCGCAGAGGCATACTCTGTGATCGACCAAAAAATGCAGAACTTGCTTTCTGAACAGGCTAGCTTGGAGAAAACCATCCAGGAATTAAAGGCTGAATTGAGGAGACATGAACGTGACTATGTTCTTGCTCAAAAAGAGATAGTTGACCTTCAGAAGCAGGTGACAGTTCTCCTTAAGGAATGCCGAGATATTCAACTTCGTTGTGGATCTTTTGGGCTTGATGGTCTTGATGATGGTACTATTGTTGTTGCGACAAATGCAGAATCTGATACTGAAAAATTGACCTTTAAGGACATAAATGGATTGGTGGAGCAGAATGTCCAACTCAGGAGCCTTGTGCGCAGTCTTTCTGATAAGGTTGAAAGTAGAGAGATGGAGTTCAAGGAAAAGTTTGAAATGGAGCTCAAAAGGCATACTGATGAATTTGCCTCCAGAGTAGCTGCTGTGTTACAAAGAGCTGAGGAGCAAGGGCGCATGATTGAATCTCTTCATGCCTCTGTTACAATGTACAAAAGGTTATATGAAGAGGAACATATACATCAATCATCTCTGCCCCATTCTGCTGAAGCTGCTCCAGATGGTGGGAGGACTAATCTGAAGCTTCTCCTTGAAAGATCCCAGGAAGCTTCTAAGAAGGCCCAGGAGCAGGCTGGGGAGCGAGTGAGATGTCTTGAAGACGAGCTGGTGAAGTCTCGGAGCGAGATTATATCATTGCGAACAGAGCGTGACAAGTTGGCTCTGGAAGCAAATTTTGCTAGAGACAGACTTGATAGCTTTATGAAGGAATATGACCGTCAGAGAATTGAAACCAATGGCATTTTAGCTAGAAATGTGGAGTTTTCACAATTAATAATTGACTACCAACGAAAGCTGCGCGAAAGTTCTGAATCTCTGCATGTTGCTGAGGATCTTTCTCGGAAGCTGACTATGGAGGTATCTGTTCTAAAGAATGAAAAGGAAATGTTAGTTAGTGCTGAGAAGAGAGCTTGCAATGAAGTTCGTAGTTTGTCAGAGAGGGTCTATCGTCTACAGGCTAGTTTGGACACCATTCAGAGTGCTGAGGAAGTTCGTGAGGAGGCAAGAGCTACTGAGAGGAGAAAACAAGAGGAGCATATAAAGCAAGTTGAGAGGGAATGGGCGGAGGCTAAGAAAGAGGTGCAACAAGAGCGGGACAGTGTTCGGAACCTCACGTTAGACCGTGAGCAGACTATAAAAAATGCAATGAGACAAGTTGAAGAAATGGGAAAAGAGTTGGCTCATGCTTTGCGAGCTGTTGCAGCTGCTGAATCCAGAGCCGCGGTAGCTGAGGTGAAATTGTCTGATCTAGAGAGAAAAAACAAATCTGCAGATGCTAAGGATGTTGACATAGGTGGTGGAGGTGAACCTTCGTCTCTGTCAAGCATTGGGATTATTGCTGAACTACACATGGCGAAGGAAGAGATTGAAAAATTGAAAGTGGAAGCACAGGCTAACAAGGATCACATGCAACAGTTTAAGAGCATTGCACAGGTGAATGAAGATGCATTAAAACAGATGGAATGTGCCCATGACACCTTCAAGATTGAGGCAGACAAACTGAAGAAATCACTAGAAGCTGAAGTTCTTTCCCTTAGAGAGAAGATTTCTGAACTTGAATATGAATCTAGTTTGAAGTCGGAAGAAGTGGCTTCTGCAACTGCGGGGAAAGAGGAGACCCTTGCTTCTGCTTTAGCAGAAATCACAAATCTAAAAGAACAATCGTCAGTAAAAACTTCCCAAATTTTAGCAATGGAAGTTCAGATAACTGCATTGAAAGAAGACTTGGAGAAGGAGCATCAGCGATGGCGTGCCACTCAGGCCAATTATGAAAGACAGGTCATCCTTCAGTCAGAGACTATTCAGGAGTTGACAAAAACATCAAAAACCTTGGCTTCTCTCCAAGAGGAAGCTTCTGAATTGCGTAAATCGGCAGATGCACACAAAAGTGAAAATAAGGAATTGAAATCTAAGTGGGAAGTAGAGAAGACAATTCTTGAGGAATCAAAGAGTGAAGCTGAGAAGAAGTACAATGAAATCAATGAGCAGAACAAAATACTGCACAGTCGACTTGAGGCTTTGCACATTCAGTTGGCTGAGAAGGATCGTTCTTCTGTCGGAGTTTCTTCTGGAACTGCCACCACTAATACCCTTGGAGATGCTGGTTTACAGAATGTTATTAATTATCTCCGACGCTCGAAAGAGATTGCAGAAACAGAGATTTCTTTGTTAAAACAGGAAAAACTACGACTGCAATCACAACTTGAGAGTGCTCTCAAGGCAGCAGAGACTGCCCAAGCATCACTGCAAGCAGAGCGTGCAAATTCAAGAGTAGTGTTGTTCACTGAGGAAGAAATCAAATCTTTACAACTGCAGGTTAGAGAAATGAACTTACTTCGGGAAAGCAACATGCAACTCAGAGAAGAGAACAAGCACAATTTTGAGGAATGCCAGAAACTTCGTGAAGTTGTTCAAATGGGTAGGGCCAAGACAGAGAATATAGAGTCCCTACTTAGGGAGCGAGAAATTGAGGTGGAAGCTTGTAAGAAAGAAATTGAGATGCACAAGCTTGAGAAAGATAATCTGGAAAAGAGGGTCTCTGAGTTACTTGTAAGGTGTAAAAATATAGATGTAGAAGATTATGATCGAATGAAGAATGACGTTCAACTCATGCAGGAGAAACTGAAAGATAAGGATGCTCAGATGGAAGAGATGAGAAACATTCTTTGTGAAAGGGAGGATACAATATCAAAATTGGAGAAAGATCTTTCAAAATGCAAATTGGAACTGAGTGAAAAGGAGAAGAGGATAAATGTAATTTTGCAAGTTGAGGCTAGTTCAAAGCTAGATGTAGAGAAGCAAAGGAAGATGTTGATTCAGTTGAAGAGGCGATCTGATACTCTGTCAAAGGAAAAGGAGGAACTGAGCAAAGAGAATCAAACTCTTTCTAAGCAGTTGGAGGAGCTTAAACAAGGGAAAAGGTCAATTGGTGATACTGCTGGTGAACAGGCCATGGAGGAGAAAGATACCAAGATACAGACACTTGAGAAACATTTGGAGAGGCAGAGAGAGGAGTTGAGAAAGGAGAAGGAAAGGCGTCTGAAGAATGAGAAGGCAATAAGGGATTCTTATAATAACATTGAGCAGGATAAAACAAAGTTCGTAAATGAACTTGAGATGCATAAGCAGGCACTGAAGCAGCTTTCAGATGAACTACAAAAGCTTAAGCATGCGAAAGACAATTTGCCCCAGGGTACGTCAGTAGTTCAAATTCTTTCTGGCACTGTTCTGGATGATCTAGGCGCAGCCTATGTGTTGGCCGTTGAAAATTTCGAAAAGGCAGCACATATAGTTTTCGGTGAACATGGAGCTCGTGGTGTTCCCATGGACACCTCTTCAGTTGCAGACACTTCATTGACGGCTGCTACAGGTCCGATAGTTTCTGTTCAAGCCCCAAGTCTTGTGCTCCCAGTGGGACCTGCAACAAGTGGCTTGCCTGCTAAAGCAACTGAAGAAAGTGTGAAGAGACTAACTTTGCCCAAAACCAATGTTGAGACTCGAAAAATGGGGAGGAGGTTAGTCCGACCTCGTATTGTAAAACCTGAAGAGCCACAGGGTGATGTGGAGATGTCAGAGGTGGAAGGAGCTATCAATGCTGGCAAACGTGCACCTTCTAGTAGTGACACGGAAACTCAGGGAAATCCAACTTTATCAACGCAACCATTGGCCCACAAACGTATGGCATCTTCCTCCACTTCCGAGTTGCATGAGGAGACAGTAATCCAAGGAGACACCAGCTCTGATGTGCCAGTACCTGCACTGAAGAAGTTGAAAGGTTCAGAACGGGCACAAGAGAGTGATGAAGGTCAATTTGCTGCTCCTGTGGAAGGTCTTGGAACTTTACTGGCCACTGAAGAACCATTTGAGGCTGGTGAATTGCCACAAGGTTCAAATGAGGAAGCAATGGATGCTGAGAAGGAAGAGGTTGAGACTACTGGAGAGATAGCAGAGGTGGCTAAAGAACAACAATTAGAAAGTATGAGGCCATGTGAATTGCAGAGTGACAAGAACAGTGTTCTAGATGAGAATGTGGATAGACAGGGTGGATTAGAGATGGTGTCTGATGACGGGCCGAAGGATCAAGCTGAGCCAGATTACCAGCAGTCAGTTATGGAATCTGGAAGTGAGAGAGAAGAGGGAGAGCTCTTGCCTGATTTTACAGACCCTGAGGTTGGTGATATTTCCAACATAATGGAGAGCCCAGAAATAGGGGAAGGTCAACCTGAGCATGTTGCAACCCCCGTGGCTTCACCAGCTAGGGCTGATGATGAAACTCTAGTTGCTGCAGCAGTCGAGGTTGGTGAGATAAATTCTCCCGAGGCTTTAAATGATGTTTTCCTAGAAGGTGATGTTGCTGAAGAGACTGCTGAGGGTTCTGATAAGTCAAATGATGGAAAGGACCAAATTGTGGTGGAGACTGATCAGGTCACTGAAGCTCTCTACGTTCCAGTCGAGAGTACTTCAGCAAGTGTGGGTACAGAAATCGATATCTCAAAACAAGGTAGTCCCCTCTCAAAACAAGTTGGTTCAATCGAGAGTACTTCAGCAAGTGCTGCTGCAGAAGTTGATATCTCGAAACAAGTTGATATCTCAAAACAGGGTAGTCCTGTCTCTAAACAAGGCAGCAGTTCAACTGTCACCACGGAAGTGGAAGTGGTAAGACAGGTGTCACCTGCAGGTAATACTTCAACTACAATAAATCTTTCAGAGCGAGCTAGGCAGAATGCTGCGAAAAGATTAGGTGTGGTTTCTTCTCCAGTGGTTAGAGGCCGCGGAAGAGCTGTACAACGTGCTCGAGGTGCACGTGGTGTACGTGGCGGACGCGTTGGACGTGGACAATCATCTGGCGAACAAGGTTAA
Protein Sequence
- >Jr06_11970
MPLFLSEEEFSRCANDAFAVAEKADAFISQLYKELETVRAQADASAITAEQTCSLLEQKYLSLSAEFSKLESDNAQLHSSLDHHLSDLAQVQAQKHQLHLQSIGKDGEIERLTTEVSELHKSKRQLIELVEQKDLEISEKNATFKSYLDKIVNLSDTAAQRESRVSEIEAELSRAQATCSRLSQEKELIERHNVWLNDELTDKVDNLTEQRRKYNDLEADMSAKLADIERQSNDCSSSLQWNKERVRELETKLTSLQEELCSSKLTAAANEDRLSAELSTVNKLVELYKESSEEWSKKAGELEGVIKALEVNCSANQTHLSQVENDYKDRLEKEVSARCQFEKEAADLKAKLEKCEAEIENSRKSNELNLLPLSNFSTEILMNSFETNDVVEDAHMIVPKIPAGVSGTALAASLLRDGWSLAKMYSQYQEAVDALRHEQLGRKQSEAILQRVLYELEEKAEVILDERAEHERLAEAYSVIDQKMQNLLSEQASLEKTIQELKAELRRHERDYVLAQKEIVDLQKQVTVLLKECRDIQLRCGSFGLDGLDDGTIVVATNAESDTEKLTFKDINGLVEQNVQLRSLVRSLSDKVESREMEFKEKFEMELKRHTDEFASRVAAVLQRAEEQGRMIESLHASVTMYKRLYEEEHIHQSSLPHSAEAAPDGGRTNLKLLLERSQEASKKAQEQAGERVRCLEDELVKSRSEIISLRTERDKLALEANFARDRLDSFMKEYDRQRIETNGILARNVEFSQLIIDYQRKLRESSESLHVAEDLSRKLTMEVSVLKNEKEMLVSAEKRACNEVRSLSERVYRLQASLDTIQSAEEVREEARATERRKQEEHIKQVEREWAEAKKEVQQERDSVRNLTLDREQTIKNAMRQVEEMGKELAHALRAVAAAESRAAVAEVKLSDLERKNKSADAKDVDIGGGGEPSSLSSIGIIAELHMAKEEIEKLKVEAQANKDHMQQFKSIAQVNEDALKQMECAHDTFKIEADKLKKSLEAEVLSLREKISELEYESSLKSEEVASATAGKEETLASALAEITNLKEQSSVKTSQILAMEVQITALKEDLEKEHQRWRATQANYERQVILQSETIQELTKTSKTLASLQEEASELRKSADAHKSENKELKSKWEVEKTILEESKSEAEKKYNEINEQNKILHSRLEALHIQLAEKDRSSVGVSSGTATTNTLGDAGLQNVINYLRRSKEIAETEISLLKQEKLRLQSQLESALKAAETAQASLQAERANSRVVLFTEEEIKSLQLQVREMNLLRESNMQLREENKHNFEECQKLREVVQMGRAKTENIESLLREREIEVEACKKEIEMHKLEKDNLEKRVSELLVRCKNIDVEDYDRMKNDVQLMQEKLKDKDAQMEEMRNILCEREDTISKLEKDLSKCKLELSEKEKRINVILQVEASSKLDVEKQRKMLIQLKRRSDTLSKEKEELSKENQTLSKQLEELKQGKRSIGDTAGEQAMEEKDTKIQTLEKHLERQREELRKEKERRLKNEKAIRDSYNNIEQDKTKFVNELEMHKQALKQLSDELQKLKHAKDNLPQGTSVVQILSGTVLDDLGAAYVLAVENFEKAAHIVFGEHGARGVPMDTSSVADTSLTAATGPIVSVQAPSLVLPVGPATSGLPAKATEESVKRLTLPKTNVETRKMGRRLVRPRIVKPEEPQGDVEMSEVEGAINAGKRAPSSSDTETQGNPTLSTQPLAHKRMASSSTSELHEETVIQGDTSSDVPVPALKKLKGSERAQESDEGQFAAPVEGLGTLLATEEPFEAGELPQGSNEEAMDAEKEEVETTGEIAEVAKEQQLESMRPCELQSDKNSVLDENVDRQGGLEMVSDDGPKDQAEPDYQQSVMESGSEREEGELLPDFTDPEVGDISNIMESPEIGEGQPEHVATPVASPARADDETLVAAAVEVGEINSPEALNDVFLEGDVAEETAEGSDKSNDGKDQIVVETDQVTEALYVPVESTSASVGTEIDISKQGSPLSKQVGSIESTSASAAAEVDISKQVDISKQGSPVSKQGSSSTVTTEVEVVRQVSPAGNTSTTINLSERARQNAAKRLGVVSSPVVRGRGRAVQRARGARGVRGGRVGRGQSSGEQG