Information report for Jr06_03670
Gene Details
|
|
Functional Annotation
- a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A, the other two members of the SWI3 family. Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Referred to as CHB3 in Zhou et al (2003).
Homologous
- Arabidopsis thaliana — AT1G21700
Gene Resources
- Pfam: PF00249 PF04433 PF16495
- UniProt: A0A2I4FY38
- RefSeq: XP_018836553.1
- AlphaFoldDB: A0A2I4FY38
- KEGG: jre:109003052
- InterPro: IPR000433 , IPR001005 , IPR007526 , IPR009057 , IPR017884 , IPR032451 , IPR036388
- PANTHER: PTHR12802 , PTHR12802:SF61
- SUPFAM: SSF46689 , SSF57850
- PROSITE: PS50090 , PS50135 , PS50934 , PS51293
- Gene3D: 1.10.10.10 , 1.10.10.60
- OrthoDB: A0A2I4FY38
- CDD: cd00167
- STRING: 51240.A0A2I4FY38
Sequences
CDS Sequence
- >Jr06_03670
ATGGACGAAGACGACGACGAGGATGACCCTCCTCCACCCGCCCACCACGACGACGACCTCGACCCCCAGGATGAGGCCGAAGACCCCCAATCCGGTGCCGCTGTTCCTCCTCCCCACGAGAGTGAGGTCCTCAAAGACGGTGGGGTCCGCGTCTGCGGTTTCCCTCCCGTCGTCAAGCACGCCGTGAACCGGCCCCACTCCTCCGTGCTGGCCATCGTGGCCTCCGAGCGGGCCAATCAGAGCGGAGAGAACGGAAAGGGCCAGCAGCAGCTCCAGACTCCGCTGCCCGTCTTGGAAAATGTCTCCTATGGACAGCTCCAGGCACTGTCCGCTGTCCCCGCGGATTCCCCGGTGTTCGATCAGGACCGGACGGACGGTGCTGGTTCGGCCTATGTGATCACGCCTCCGCAGATCATGGAAGGGCGTGGTGTTGTCAAGCGGTTTGGGCCTAGGGTTCATGTGGTTCCAATGCATTCAGATTGGTTTTCACCAGCTACAGTGCATCGGCTGGAAAGGCAAGTGGTGCCACATTTTTTCTCTGGGAAATCTCCGGACCATACGCCAGAGAAATACATGGAATGTAGGAATTACGTTGTTGCCAAATACATGGAGAATCCGGAGAAGAGGATTGTAGTCTCTGATTGCCAAGGGTTGGTAGTTGGCATTGATAATGAAGATTTGACTCGAATTGTTCGGTTTCTTGATCACTGGGGAATTATCAATTACTGTGCGGAGTCACCAAGTCGTGAGCCTTGTAGTGGTGGTTTCTACTTGAGGGAGGATTCAAATGGTGATATCCATGTGCCATCAGCTGCTCTAAAGTCTATTGATAGTTTAATCAAATTTGACAGGCCCAAATGTCGGCTTAAAGCGGCTGATGTTTATTTGTCATTGTCATCTCACAATGCTGATGCCTCTGATTTGGACAACAGAATCCGAGAGCATCTGTCTGAAAATCACTGCAATCATTGTTCTCGGTCTCTTACCACTGTGTACTATCAATCACAGAAGGAGATTGATACACAACTATGCTCTGATTGCTTTCAAGAGGGGAGGTTTGTTACTGGACATTCCAGCATAGACTTTATAAGGGTGGATTCAACAAATGATTATGCTGACCCAGATGGGGAAAGCTGGACCGATCAGGAAACCTTACTTCTACTTGAGGCGATGGAGATCTACAACGAGAATTGGAATGAAATTGCTGAACATGTTGGTACCAAATCAAAAGCACAATGCATTCTTCACTTTCTCCGTCTACCAATGGAGAATGGCCTACTGGAAAATATTGAAGTTCCCAGCATGTCATCCAACTCATTAAATGGAGATGATCATGGAAGATCCCATTCAAATTATAATGGGGATTCAGCAGGATCCTGTCATCAAGATACTGACTCTGAAAGCAGACTTCCTTTTGCAAATTCTGGGAATCCAGTTATGGCCCTGGTTGCCTTTTTGGCCTCTGCTGTTGGACCAAGAGTTGCTGCTGCATGTGCCCATGCATCCTTGGCTGCATTGTCCGAGGACGATGGCTTATCTGTTTCTGGAAGAATTTCACCGGTGGAAGGAACTGGACATGGTAATAGGATGAATTCTGAGAGTACACATAGCAGAGAAGGTGGTCGTCTTGGAGAAACTGCAAATTCATTCCAGCACAAAGACGAGAACTCAGGAGTACATGGTTCAAGGAATCATAATGAGGGGCAGGTTCCATTATCTTCAGAGAAAGTTAAAGTTGCTGCAAAAGCTGGCCTTGCTGCTGCAGCAACTAAAGCAAAACTTTTTGCAGATCATGAAGAAAGGGAAATTCAGAGGCTATCTGCGAATATTATTAACCATCAGTTGAAAAGATTAGAGCTGAAGCTGAAGCAATTTGCTGAAGTGGAAACATTTTTGATGAAAGAATGTGAACAAGCGGAGAGGACAAGACAGAGATATGCTGCTGAGCGGAATCGCATGATATCAACTCGATTTGGACCTGCTGGCATTGTGTCAACCAGTTTACCTGGTCCGTCTATGGTGAACAATAACACCAACAATAGGCAACAAATAATGTCAGCTTCACCTTCACAGCCGAGCATTCCAGGATATGGCAACAACCAACCAGTCCATCCCCACATGCCATTTATGCCACGTCAGCAAATGTTTGGGATGGGGCCAAGGCTGCCCATAGCAGCAATACAGCAGCCCTCGTCTACCTCAAATTTCAGTGGCTCTGGGAATGCACAGCCTACTCTCAATCATCCAATGCTACGACCAGTATCTGGTACTAACTCTGGTTTGGGTTGA
Protein Sequence
- >Jr06_03670
MDEDDDEDDPPPPAHHDDDLDPQDEAEDPQSGAAVPPPHESEVLKDGGVRVCGFPPVVKHAVNRPHSSVLAIVASERANQSGENGKGQQQLQTPLPVLENVSYGQLQALSAVPADSPVFDQDRTDGAGSAYVITPPQIMEGRGVVKRFGPRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKSPDHTPEKYMECRNYVVAKYMENPEKRIVVSDCQGLVVGIDNEDLTRIVRFLDHWGIINYCAESPSREPCSGGFYLREDSNGDIHVPSAALKSIDSLIKFDRPKCRLKAADVYLSLSSHNADASDLDNRIREHLSENHCNHCSRSLTTVYYQSQKEIDTQLCSDCFQEGRFVTGHSSIDFIRVDSTNDYADPDGESWTDQETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPMENGLLENIEVPSMSSNSLNGDDHGRSHSNYNGDSAGSCHQDTDSESRLPFANSGNPVMALVAFLASAVGPRVAAACAHASLAALSEDDGLSVSGRISPVEGTGHGNRMNSESTHSREGGRLGETANSFQHKDENSGVHGSRNHNEGQVPLSSEKVKVAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFAEVETFLMKECEQAERTRQRYAAERNRMISTRFGPAGIVSTSLPGPSMVNNNTNNRQQIMSASPSQPSIPGYGNNQPVHPHMPFMPRQQMFGMGPRLPIAAIQQPSSTSNFSGSGNAQPTLNHPMLRPVSGTNSGLG