Information report for Jr04_18550
Gene Details
|
|
Functional Annotation
- Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family. Functions as a positive regulator of DNA homologous recombination (HR). In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type. Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration. INO80 was also shown to regulate a subset of the Arabidopsis transcriptome.
Homologous
- Arabidopsis thaliana — AT3G57300
Gene Resources
- Pfam: PF13892 PF00271 PF00176
- UniProt: A0A833XX68
- EMBL: LIHL02000004
- InterPro: IPR000330 , IPR001650 , IPR014001 , IPR020838 , IPR027417 , IPR038718 , IPR049730 , IPR050520
- PANTHER: PTHR45685 , PTHR45685:SF2
- SUPFAM: SSF52540
- PROSITE: PS51192 , PS51194 , PS51413
- Gene3D: 3.40.50.10810 , 3.40.50.300
- CDD: cd18793
- STRING: 51240.A0A2I4DP02
Sequences
CDS Sequence
- >Jr04_18550
ATGGACCACAGGAGGCAATCCAGGGACTCTCTCTCGTACTCCAATCTCTTCAATCTTGAGTCCTTGACGAACTTTCAACTTCCACAAGAAGATGATGATTTTGATTATTATGGGAATAGTAGTCAGGATGAGAGCAGAGGTAGCCAAGGTGGAACGATTATGAAACGCGGAAATGGGACTTTGCGTGAAAGGGAGCAGGGTTTGTTAAAGAAAAGGAAGCATTTGGAAAATAGTGAAGACGAGGACAATGACAGTTATTACGGGACAAAAATTACAGAGGATAGGTATCGATCAATGCTCGGAGAACATATTCAAAAGTACAAGAGAAGGTTGAAGGATTCTTCAGCAAGTCCAGCACCAACCAGGGTGGGAACCCCGGTTCCAAGGAGTAATCTGGGTTTAAAAACTAGGAAACTGGAGAATGAGCAGCGAGGGGTATTCAATGAAGTGGAAACCATGTCGGACTGGCTCAATGATATTAATCGTCAAAAACAAGTGAACAATCGTGAACCAAATTTCGCACCACTCAGTGGCACCGAAAGAACAACATATGAACCGGCCTTTTTAGACATTGGGGATGGTATCACCTATAAGATTCCACCAACTTATGATAAGTCAGCACCATCTCTGAACTTGCCAAGCTTCTCAGATATCCAGGTGGATGAGTTTTACTTAAAGGGTACATTGGACTTGGGGTCCTTAGCTGCAATGATGGCCAATAATAAAAGGCTTGGGCCTAGTAACCGGGTGGGAATGGGGGAGCTGCAGCCCCAGTACGAATCACTTCACGCAAGATTGAAGGCTCTGTCAGCTTCTAAATCATCCCAGAAGTTCAGTCTCAAAGTGACTGATATCGGGTTACATTCCTCCATCCCAGAGGGGGCAGCTGGAAACATAAAGCGATCCATTTTGTCTGAGGGTGGTGTTTTGCAGGTTTACTACGTGAAGGTTTTGGAGAAAGGAGACACATATGAGATAATTGAACGGTCTCTACCTAAGAAGCCAAAGGTAAAGAAAGGTCCCTCTGTGATTGAGGAGGAAGAAAAGGAGAAGATTGGAAAAGTTTGGGTAAGCATTGTAAGAAGAGACATGCCAAAGCATCATAGGATTTTTTCAGCTTTTCACCGAAAGCGACTAATTGATGCCAAGAGGTTCTCGGAAAACTGTCAAAGAGAGGTGAAAATGAAGGTGAGTAGATCACTTAAATTGATGAGAGGTGCTGCAATTCGCACAAGGAAATTAGCTAGAGATATGCTGCTGTATTGGAAGCGAGTAGATAAAGAGATGGCAGAAGTTAGGAAAAGAGAGGAGAGAGAAGCTGCTGAAGCTTTGAGGCGTGAGCAGGAGCTTCGAGAAGCAAAAAGACAACAGCAAAGGCTCAATTTTCTTATACAGCAAACTGAACTTTACAGTCATTTTATGCAAAATAAGTCAAATTCACAGCCCTCTGAAGCTTTGCCTTTGGGTGATGAAACACTAAATGACCAAGAAGTGCTTCCGAGCACTTCGGATGCTGAGCCTGATGAGGAGGAAGAAGATCCTGAGGAGGTTGAGTTGAAGAAGGAGGCTTTGAGAGCTGCTCAAGATGCAGTTTCGAAGCAGAAAAAGTTAACAAGTGCATTCGATAGTGAATGTTTGATGCTGCGACATGCTGCTGAATCTGAGGCCCATCCACCTGAGGTCACAGGAGCTAGTAACATAGATCTACATAACCCTTCCACCATGCCTGTAACATCAACAGTTCAGACACCCCGGATGTTTAAAGGCTTCCTTAAAGAATATCAGCTAAAAGGTCTTCAGTGGCTGGTTAATTGTTACGAGCAGGGTTTAAATGGCATACTTGCTGATGAGATGGGACTTGGAAAGACCATTCAGGCCATGGCATTTTTGGGTCATTTGGCTGAGGAGAAAAATATATGGGGGCCTTTTTTGGTTGTTGCACCTGCTTCTGTCTTGAACAACTGGAATGACGAGGTTAATCGTTTCTGCCCTGACTTGAAAACTCTTCCCTATTGGGGTGGACTTCAAGATCGAACCATACTTAGGAAAAAAATCAAACCCAAGGATCTGTACCGCAGGGAAGCTGGATTTCACATTCTCATCACCAGCTACCAGCTTCTAGTGTCTGATGAGAAGTACTTTCGGCGTGTGAAATGGCAATACATGGTGTTAGATGAAGCCCAGGCAATCAAAAGTTCTAACAGTATAAGATGGAAGACACTGCTCAGTTTCAATTGTCGGAACCGCTTGCTGCTGACAGGTACTCCTATCCAGAACAATATGGCAGAGTTGTGGGCCCTTTTACATTTCATTATGCCAACCTTATTTGACAGTCATGAGCAATTCAATGAGTGGTTTTCAAAAGGAATCGAGAGTCATGCTGAGCATGGGGGTACTTTAAATGAGCACCAACTTAACAGATTGCATTCGATTCTAAAGCCATTTATGCTACGACGAGTTAAAACAGATGTGGTTTCTGAGCTGACCAGTAAAACTGAGGTTACAGTGCATTGCAAGTTGAGTTCTCGACAGCAAGCTTTTTATCAGGCTATTAAGAACAAGATATCTCTTGCTGAGTTGTTTGACAGCAATCGTGGGCATCTTAATGAGAAGAAAATTCTCAATCTAATGAATATTGTTATTCAGCTGAGAAAGGTGTGTAATCATCCAGAGTTGTTCGAGAGGAATGAGGGAAGCACATACCTCCACTTTGGGGAGATCCCAAATTCTCTTCTGCCCCCTCCCTTTGGGGAGTTGGAGGACATACATTATGCAGGAAGTCACAATCCTATAACCTATAGGATACCGAAACTCATTCATCAAGAAATTGCCCGTAGTTCTGAAACTCTTTGCTTGGCAGTTGGGCAGGGTGTCTTCAGAGAATACTATCAGAAACACTTTAATATGGTCTCCCCACAAAATGTTTATCGATCTATATTCCTGCAGGAGGATAATTCAAATGGATTATCTGTTAGAAGTGGAACTTTTGGTTTTACCCGTTTGATGGATCTGTCTCCATCAGAAGCCACATTTCTAACTAGTGGTTCTTTTATGGAGAAACTTTTGTTTTCTGTGATGAGATGGGACCGACAATTCCTGGATGGGATCATAGATTCACTCATGGAAGCTATGGATGATGACCCTGAATGTTACCTCGAGAGGGGGAAAGTTAGAGCTGTGACACGGATGTTACTGCTGCCATCTAGATCTGAGACTAACTTACTCCGAAGTAAATATGCAACAGGTCCTGGAGATGCTCCATTCGAGGCTTTAGTTATCCCTCATCAGGATAGGTTTCTATCTAATAGTAGGCTTCTTCACTCAGCATACACATTTATTCCACGAATTAGAGCTCCTCTGATTGGTGCCCACTGCTCAGATAGAAACTTTGCTTACAAAATGACTGAAGAACTACATGATCCCTGGTTAAAAAGATTGTTTACTGGGTTTGCACGGACATCTGAATTCAATGGACCCAGAAAGCCAGATCATCCTTCTCATCATTTAATTCAAGAGATTGATTCCAAATTACCAGTTTCACAACCTGCTCTTCAGCTGACATACAAGATTTTTGGGTCTTCTCCACCAGTACGAAGCTTTGACCCAGCAAAGTTGCTCACTGACTCTGGGAAGCTTCAAACACTTGATATACTATTGAAACGTCTGCGGGCAGAAAATCACCGAGTTCTCTTGTTTGCCCAAATGACGAAGATGCTGAATATTCTTGAGGACTATATGAACTATAGGAAATATAGATATCTTAGACTCGATGGATCCTCAACTATAACCGATCGGCGAGATATGGTCAGAGACTTCCAGCATCGAAGTGATATTTTTGTGTTCTTGTTGAGTACAAGAGCTGGTGGACTTGGCATTAACTTGACAGCTGCTGACACTGTCATATTTTATGAAAGTGATTGGAATCCAACTTTGGATTTGCAAGCAATGGATAGAGCTCACCGGTTGGGACAGACAAAAGATGTTACTGTCTACCGACTTATTTGTAAAGAGACAGTTGAAGAGAAGATTCTTCAAAGAGCAAGTCAGAAAAATACTGTGCAGCAGCTTGTTATGATGGGTGGTCATGTTCAGGGTGATCTTTTGGCTCCTGAGGATGTTGTATCACTACTTCTGGATGATGCCCAGTTGGAGCAAAAACTGAGAGAAATTCCAGTGCAGGTTAAGGATAGGCAAAAGAAAAAACATTCGGCAAAAGGTATACGGGTAGATGCAGAAGGTGATGCATCATTGGAAGATCTAACAAACGCTGGACCTCAGGATACAGGACATGAGCCCTCTCCTGATCCTGAGAGAGCAAAATCTAGTAACAAAAAGAGAAAGGCTGCTTCGGACAAACAAGCTCCGACAAAGCAAAGGAATCCTCAAAAGTCAAATTCGCCAATGGACTACGAGTTGGATGATTCCCTTCAAACTCCTGATCTGCAAGCACAGAGGCCGAAGAGGTCAAAGAGGCCAACAAAGAGCGTAAATGAAAATCTTGAACCGGCATTTACCGGTGCCCTGATGACCGTAGCAGGGCAGACCCATATTCCATCAGTGAGTGAGTGA
Protein Sequence
- >Jr04_18550
MDHRRQSRDSLSYSNLFNLESLTNFQLPQEDDDFDYYGNSSQDESRGSQGGTIMKRGNGTLREREQGLLKKRKHLENSEDEDNDSYYGTKITEDRYRSMLGEHIQKYKRRLKDSSASPAPTRVGTPVPRSNLGLKTRKLENEQRGVFNEVETMSDWLNDINRQKQVNNREPNFAPLSGTERTTYEPAFLDIGDGITYKIPPTYDKSAPSLNLPSFSDIQVDEFYLKGTLDLGSLAAMMANNKRLGPSNRVGMGELQPQYESLHARLKALSASKSSQKFSLKVTDIGLHSSIPEGAAGNIKRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKPKVKKGPSVIEEEEKEKIGKVWVSIVRRDMPKHHRIFSAFHRKRLIDAKRFSENCQREVKMKVSRSLKLMRGAAIRTRKLARDMLLYWKRVDKEMAEVRKREEREAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKSNSQPSEALPLGDETLNDQEVLPSTSDAEPDEEEEDPEEVELKKEALRAAQDAVSKQKKLTSAFDSECLMLRHAAESEAHPPEVTGASNIDLHNPSTMPVTSTVQTPRMFKGFLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLGHLAEEKNIWGPFLVVAPASVLNNWNDEVNRFCPDLKTLPYWGGLQDRTILRKKIKPKDLYRREAGFHILITSYQLLVSDEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHSILKPFMLRRVKTDVVSELTSKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGSTYLHFGEIPNSLLPPPFGELEDIHYAGSHNPITYRIPKLIHQEIARSSETLCLAVGQGVFREYYQKHFNMVSPQNVYRSIFLQEDNSNGLSVRSGTFGFTRLMDLSPSEATFLTSGSFMEKLLFSVMRWDRQFLDGIIDSLMEAMDDDPECYLERGKVRAVTRMLLLPSRSETNLLRSKYATGPGDAPFEALVIPHQDRFLSNSRLLHSAYTFIPRIRAPLIGAHCSDRNFAYKMTEELHDPWLKRLFTGFARTSEFNGPRKPDHPSHHLIQEIDSKLPVSQPALQLTYKIFGSSPPVRSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTITDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMMGGHVQGDLLAPEDVVSLLLDDAQLEQKLREIPVQVKDRQKKKHSAKGIRVDAEGDASLEDLTNAGPQDTGHEPSPDPERAKSSNKKRKAASDKQAPTKQRNPQKSNSPMDYELDDSLQTPDLQAQRPKRSKRPTKSVNENLEPAFTGALMTVAGQTHIPSVSE