Gene Details:
- Gene ID: Jr04_17220
- Suggest Gene Name: VERNALIZATION INDEPENDENCE 5
- Description: putative flowering gene
- Species: Juglans regia
- Source: Putative flowering gene from PlantCFG
Protein Features:
- Pfam: PF03126
Functional Descriptions:
- Encodes a yeast Paf1C subunit homolog required for the expression of the MADS box gene FLC and other members of the FLC/MAF MADS-box gene family.
Homologous
- Arabidopsis thaliana — AT1G61040
Sequences:
CDS Sequence
- >Jr04_17220
ATGGCAGACCTAGAGAATTTGCTCCTGGAGGCTGCAGGAAGAACCAGTTCAGCTGGCAGAAACCGGAATTCACGTCCACCATCTAGAAGGCGGCGTGAAGGCTCATATTCTGATGGTGGAAGTGATTATAGGGATGATGACTCTGACGATGATCGTGGTTATGCTAGCAGAAAGCCCTCTGGATCTCAAGTTCCTTTGAAGAAGAGGTTAGACCCTACTGAAAGAGATGATGATCTGGGCAGCCAGGAAGAAGGCGATGATGGTGGGCTTTCTGACCGTGAGGGTGACAGCAGTGATGAATCTGATGTTGGTGATGATCTTTATAAGAATGAAGATGACAGACGAAAGCTTGCACAGATGACTGAACTTGAAAGGGAGATGATCTTGTCAGATAGAGCTTCTAAGAAAATCGATAAAAATTTACGGGAGAAAATAAGATCAAAGCGGGAGAGTGGAAAAACCACCCAATCTAGAAAAGAGACTCCACCACTTCCATCATCTCGTATGCGCTTGTCAGCGAGATCTGCTGACAGATCAGCTGCCAAAGATGATGCATTGAATGAATTGCGAGCAAAACGGTTGAAGCAGCAGGACCCAGAAGCTCACCGTAAATTGAGAGATGCAACGAGAGGAAGTTCAGGGGGTCGAACTTTCTCACCAAAGAGAAAAGCCTTCACTAGAACAAGTCTGAGCAGCTCTAGTCAGAGTGAGAGTGAAAGTAGGTCTCACAGTGAAGATGAAGGGTCAACAGGAGATGGTGCCATGGTTGACAGTGATGAGGAGAGAGGCATGCTGGGATCTGACGTGCCTTCTTTTGATGATATAAAGGAAATTACCATTCGAAGGTCTAAACTTGCTAAATGGTTTATGGAGCCATTCTTTGAGGAGCTGATTGTGGGTTGCTTTGTGAGGGTTGGAATTGGGAGGTCAAAGTCTGGGCCTATATACAGGCTCTGCATGGTCCGGAATGTCGATGCCACAGAACCTGACCGGCAGTACAAACTAGAAAATAAAACCACATATAAGTATCTAAATGTTGTTTGGGGCAATGAAAGCTCTGCGGCCAGGTGGCAGATGGCTATGGTTTCAGACTCCACGCCACAGGAGGAGGAGTATAAACAGTGGATTAGGGAGGTAGAACGAAGTGGTGGCCGGTTGCCAAGTAAACAGGACGTGTTGGAAAAGAAGGAGGCCATTAAAAAGACCAACACATATGTTTACTCTGCAGCCACTGTGAAGCAGATGTTACAAGAGAAAAAATCTGCTTCATCAAGACCATTAAACATTGCAGCCGAGAAGGACCGGCTGAGGAGGGAGTTGGAAATTGCACAAAGCAAGCACGATGAGGCAGAGGTGGAGAGGATCAAGACAAGACTGCAGCAATTAGAGGCATCCAGGCGAACACATGAGAAAGATTCCAAGGCTGTTAGACTAGCTGAGATGAACAGAAAGAACAGGGTTGAGAATTTCAAGAATGCTTCCGGACTGAAACCTGTAAACACGGGTTTGAAAGCAGGGGAGGCTGGTTATGATCCCTTTTCAAGGAGATGGACTAGGTCAAGGAATTACTATGTTTCAAAGCCCGGTGGAGCAGCAGCTGCAGTGGCAAATGTTGATGTTAATGGTGCATCTACGAATGCAAACAGTAATGGGGTAGGAGAAAAGGTAACCACAGAAGCTGGAATGGCAGCTACAGCTGCTGCCTTGGAAGCTGCAGAGTATGCGGGGAAGTTGGTTGATACCCTTGCTCCCGTGGATCAAGGGACCGTGTCAAATGTGTTGCATAATTTCGAGCTACCAATTTCATTGGCTGCTCTTCAGAGGTTTGGTGGGCCTCTGGGAGCTCAGGCTGGATTCATGGCAAGGAAACAAAGGGTAGAAGCCACGGTTGGATGTAAAGTCCCAGAGAATGATGGAGGGAGGCATGCACTGACCCTGACAGTTAGTGACTATAAGAGAAGAAGAGGCCTTCTCGAATAA
Protein Sequence
- >Jr04_17220
MADLENLLLEAAGRTSSAGRNRNSRPPSRRRREGSYSDGGSDYRDDDSDDDRGYASRKPSGSQVPLKKRLDPTERDDDLGSQEEGDDGGLSDREGDSSDESDVGDDLYKNEDDRRKLAQMTELEREMILSDRASKKIDKNLREKIRSKRESGKTTQSRKETPPLPSSRMRLSARSADRSAAKDDALNELRAKRLKQQDPEAHRKLRDATRGSSGGRTFSPKRKAFTRTSLSSSSQSESESRSHSEDEGSTGDGAMVDSDEERGMLGSDVPSFDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKSGPIYRLCMVRNVDATEPDRQYKLENKTTYKYLNVVWGNESSAARWQMAMVSDSTPQEEEYKQWIREVERSGGRLPSKQDVLEKKEAIKKTNTYVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRRELEIAQSKHDEAEVERIKTRLQQLEASRRTHEKDSKAVRLAEMNRKNRVENFKNASGLKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKPGGAAAAVANVDVNGASTNANSNGVGEKVTTEAGMAATAAALEAAEYAGKLVDTLAPVDQGTVSNVLHNFELPISLAALQRFGGPLGAQAGFMARKQRVEATVGCKVPENDGGRHALTLTVSDYKRRRGLLE