Information report for itb11g23510
Gene Details
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Functional Annotation
- Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs.
Homologous
- Actinidia chinensis: CEY00_Acc15976
- Capsicum annuum: T459_25176
- Citrullus lanatus: Cla97C05G079940
- Glycine max: Glyma.19G261200, Glyma.03G262100
- Gossypium hirsutum: Gohir.D07G138400, Gohir.A07G133700
- Juglans regia: Jr07_10040
- Manihot esculenta: MANES_05G015200
- Nicotiana attenuata: A4A49_02244
- Populus trichocarpa: POPTR_002G181400v3
- Prunus persica: PRUPE_2G200900
- Sesamum indicum: SIN_1002242
- Solanum lycopersicum: Solyc10g005130.3
- Solanum tuberosum: PGSC0003DMG400011259
- Vitis vinifera: VIT_15s0048g02380
Sequences
CDS Sequence
- >itb11g23510
ATGGATGGTGAGGCTAGGGTTTCAGTTAATGCCGCTGATGATTTGAAGCCCTCCTACTGGATTGATGCTTGCGAGGACATTCCTTGCGATGATTTTCTCCACGAATATGTCAATTGTGATTCACATGCCACTGCCACTTTGGCCTCCCAAACCTCCAATCATGAGGAGCCTGATCCTTGTTTTTTTGGTGAGATTGATCATATTCTTGAAAACATCAAGAATGGAAGTAGTGGTGATCCTCCATCCACACCCTGCAACGTCAATGGACATGAAAATCATGCCTCCTCACCTGTGACATCCGAAACTTCCTGTGCTTTCAAGGATCCCAAGTTTAATCATCGTAATGGACACCTGCATATGAATAACAACGTCAAGCCGAGTGAAAGTGGTTTTGGGAGGGCGTGGCCTGAATGTAAAGGAAATGGATACTCCCAGCTTAGTGACAAAGGGAGATATGGAAAAAGGGCGCTTCTCAGTGAGAGCATGAATGAGAGAAGAAACCCTGACAAACCTCTAGGGAGGAAGAGACTTCGTGAGTTTAGTGATATTGATAGGCGAGATAGGGATCAAATTAAGAGAAGAGAACACCAAGGTTTTTTCAAGAGGGAGAGAGATTGGAATGAAGGGAGAGGTTATTGGGAGAGGGACAAAGAGAGGAATGAGATGGTTTTCCGAACAGGTTTATGGGAAGCTGATCGGAACCGAGAAGGGAAGCTCCCCTCCGGGAAAAGCCTTGAATGGAATGGAGGGGTGGAGATAAAACCCGAAAAACCAAAGGAACAACCCCCTGAAGAGCAGGCCCGCCAATACCAATTGGATGTTCTTGAACAGGCAAAGCAGAAAAATACTATTGCTTTTCTTGAAACAGGGGCGGGGAAAACACTCATAGCAATCCTTCTTATAAGAAGTCTTTACACTGATTTGCAAAAACAGAACAAGAAGATACTGGCTGTATTTTTGGTTCCTAAAGTTCCACTGGTTTACCAGCAAGCAGAAGTCATTCGGGAGCGAACTGGCTATCAAGTAGGGCATTACTGTGGTGAAATGGGCCAAGATTTCTGGGATGCACGCCGGTGGCAACGCGAGTTTGAGACCAAACAGGTTTTAGTAATGACAGCTCAAATTTTGTTGAACATCTTGAGGCATAGTATAATAAAAATGGAGTCTATCAATCTCCTTATCCTGGATGAATGCCATCATGCTGTAAAGAAGCATCCATACTCTTTAGTGATGTCTGAGTTCTACCACACAGCTCCAAAGGGCAAAAGACCATCAGTTTTTGGAATGACTGCTTCTCCTGTTAACTTAAAGGGTGTTTCCAGCCAAGTGGATTGTGCAATTAAGATTCGTAATCTGGAGAGTAAACTGGATTCTGTTGTTTGCACTGTAAAAGACCGCAAGGAACTGGAGAAACATGTGCCAATGCCATCTGAAATAGTAGTGGAGTATGATAAAGCTGCTACTTTATGGTCTCTTCACGAACAAATTAAACGAATGGAAGTGGAAGTTGAATTAGCTGCCCAATCAAGTTCAAGAAGAAGTAAATGGCAGTTTATGGGAGCTCGAGATGCTGGAGTTAAGGAAGAGTTGCGCCAGGTCTATGGTGTTTCTGAAAGAACTGAAAGTGATGGGGCTGCTAATTTAATTCAAAAGTTGAGGGCTATAAATTATGCACTTGGTGAACTAGGGCAATGGTGTGCCTTTAAGGTTGCCCATTCTTTTCTAACAGCTTTACAAAGTGATGAGAGACCAAATTATCAGCTTGATGTCAAGTTTCAAGAATCCTATCTCAGTAAAGTTGTCTCTCTTTTGCAATGCAAGCTGACTGAGGGAGCTGTTGCAGAAAGTAATGCTAGAGTTGTGGACATGGATATTTGTAAGACTCTAGACAGTAACATGCCTGATGAGATAGAGGAGGGAGAGCTTCTCGATAGTTATGTTGTATCTGGTGGAGAGCATGTTGATGTGATAATTGGAGCTGCTGTTGCCGATGGAAAAGTTACACCAAAGGTTCAATCATTAATAAAAGTTCTTCTGAACTATCAGCACACAGAGGATTTTCGTGCTATTATATTTGTTGAACGTGTTGTTGCTGCTTTGGTTCTACCTAAGGTATTTGCAGAGCTGCCTTCACTAAGTTTTGTGAAGTCAGCAAGCTTGATTGGCCACAATAATAGCCAAGAAATGCGGACTTGCCAAATGCAAGAAACAATTGCCAAATTCCGTGATGGTCGAGTTAACTTGTTAGTTGCTACTAGTGTTGCTGAGGAAGGTCTTGATATACGGCAATGTAATGTTGTCATCCGCTTTGATCTTGCGAAAACTGTTCTGGCTTACATTCAGTCTAGGGGCCGTGCTAGAAAGCCAGGGTCTGATTACATTTTGATGGTCGAAAGAGGAAATTTGTCACATGAAACCTTCCTAAGGAATGCTAGAAACAGTGAAGAGACATTGCGGAAGGAAGCCATTGAAAGAACTGACATTAGCCATCTCAAAGGTGCCTCCAATTTAGTTTCCACAGAGGCGTTGCCTGGTACAGTTTATCAGGTGGAATCCACTGGTGCTGTAGTGAGCTTAAATTCTGCTGTTGGACTTATCCACTTCTACTGCTCCCAGTTACCCACTGATAGGTATTCAATACTTCGTCCTGAGTTTATAATGGAGCGCCATGAGAAGCCAGGAGGTCCTTCTGAATATTCATGTAGGCTTCAACTTCCCTGCAATGCACCATTCGATAGACTTGAGGGCCCTGTATGCAGCTCAATGCATCTTGCACAACAGGCGGTTTGTTTGGATGCTTGCAAGAAGCTCCATGAGATGGGAGCATTTACTGATATGCTCTTGCCAGATAAGGGAAGTGGCACAGAATCTGAAAAGGTTGAGGAAAATGATGAAGGTGATCCCCTTCCTGGAACTGCTAGGCATAGGGAGTTTTATCCTGAAGGTGTAGCTGACATTCTCCAGGGTGAGTGGATTTTGTCGGGGAAGGATGATTGTGACAGCTCAAAATTCTTCCATCTGTATATGTATGCTGTAAAATGTGAAAATGTTGGTTCCTCAAAAGATCCATTCTTAACTCAGGCGTCAGAGTTTGCTGTGCTGTTTGGCAATGAGCTGGATGCAGAGGTATTATCGATGTCTATGGATTTATTTATTGCTCGTACTGTGATAACAAAGGCATCTCTTGTCTTCCAAGGACCAGTGGAGATTACAGAGACTCAGTTGGCATCCCTTAAGAGCTTTCATGTGAGACTGATGAGCATTGTATTGGATGTTGATGTTGAGCCATCTACCACACCATGGGACACTGCGAAGGCATATTTATTTGTTCCCATTGCTGGTGGTAAATCTGGAGATCCTGTAAAAGGTATTGATTGGGATCTTGTTGAAAAAATAACTAGAACAGATGCATGGAACAATCCACTTCAGAGAGCTCGACCTGATGTTTTTCTTGGTACTAATGAACGAGCACTTGGTGGAGATAGAAGGGAATATGGGTTTGGAAAGTTGCGCCATGGTTTGGCTTTTGGATTAAAGTCCCATCCTACATATGGCATTAGAGGAGCTGTAGCACAATTTGATGTGGTGAAAGCATCTGGTTTAGTTCCTAGCAGGCTAACCATTAAAATGTGTGATACTGTGAAATCAAGCAACAGCAAGCTAGTTATGTTTGATTGTTGTTCAAGGGCAGAAGAGCTAATTGGAAGAATCGTCACTGCAGCTCACTCTGGGAAAAGATTTTATGTTGACTCTGTTCGCTATGAGATGACTGCAGAGAGCTCATTTCCAAGGAAAGAAGGGTATCTGGGTCCTCTGGAGTACAGTACTTATGCAGATTACTATAAGCTAAAATATGGAGTTGACTTGTTGTATAGACAACAACCTCTACTAAGATGCCGTGGTGTTTCATATTGCAAGAACCTTCTTTCCCCTCGATTTGAACATTCAGAAGGTGAATCTGAGGAGATTATTGACAAAACATATTATGTTTTTCTCCCTCCTGAGCTCTGTTTTGTGCATCCACTTCCTGGATCCCTGGTTCGTGGTGCTCAGAGATTGCCCTCTATAATGAGGAGAGTTGAAAGCATGCTACTTGCTGTGCAGCTTAAGGATATCATAAGCTACCCTGTCCCTGCTTCAAAGATCTTGGAAGCTTTGACAGCTGCTTCTTGCCAAGAGACATTCTGTTATGAAAGAGCAGAGCTTCTTGGAGATGCTTATTTAAAGTGGGTTGTTAGTCGATTCCTTTTTCTCAAGTATCCCCAAAAACATGAAGGTCAACTTACCAGAATGCGGCAGCAAATGGTCAGTAATATGGTGCTATATCAGTATGCCTTGAACAAAGGACTTCAGTCATACATTCAAGCAGATCGGTTCTCTCCATCAAGATGGGCTGCCCCTGGTGTTCCACCTGTGTTTGATGAGGATACATATGAAGGAGAATCATCCTTATTTGATCAAGAAATACTTAATGCAACTAGAGCAGAAACATACCATGATGTTGATGGATATGGAGATGAGGAAACAGAAGATGGTGAGCTTGAGAATGATTCAAGTTCATATCGTGTTCTCTCTAGTAAGACACTGGCTGATGTTGTGGAAGCACTTATTGGTGTGTATTATGTTGAAGGTGGAAAGCATTCAGCAAACCACTTCATGAAATGGATTGGGATTCAGATTGATTTTAATTCTAACGATATTAACAACAAAATTTGCCCAAGTAACATTCCTGAGAATATACTAAGGAGTGTTGACTTTGAGGCACTAGAATGTGCTTTGAACATTAAGTTCAATGATAAAGGTCTACTGGTTGAAGCAATTACTCATGCTTCACGTCCATCTTCCGGAGTGCCTTGTTACCAACGACTGGAGTTTGTAGGTGATGCAGTATTGGACCATCTTATTACTAGGTACTTGTTCTTCACATACACAGATTTGCCACCGGGACGTTTGACTGACCTGCGAGCTGCTGCTGTGAATAATGAAAACTTTGCACGTGTTGCTGTTAAACATAGCCTTCACGTACACCTTCGTCATGGATCTAGTGCTCTTGAAAAGCAGATTCGCGATTTTGTTTTTGAAGTGCAAAATGAACTGTCAAAGCCAGAATTCAACTCTTTTGGATTAGGGGATTGCAAAGCTCCCAAGGTTCTTGGTGACATTGTTGAATCAATTGCAGGGGCTGTTTTTCTTGATAGTGGCTGTGACACAGCAGCTGTGTGGAGGGTGTTTCAACCCTTATTGGATCCAATGGTTACTCCAGAAACACTTCCAATGCATCCAGTTCGAGAACTGCAAGAACGGTGCCAACAACAAGCAGAAGGCCTGGAGTATAAAGCTTGTAGGAATGGAAACATAGCTACTGTTGAGGTTTATGTTGATGGTGTCCAGGTAGGAATTGCTCAAAATCCTCAAAAGAAAATGGCTCAAAAACTGGCTGCTAGGAATGCCCTTGTTGCATTGAAAGAGAAGGAGGCTGCTGAAGCTGCCAATAAGGGTGAAGATGAGGAGGGGAAGAAGAAAAATTGCAGCCAAACGTTTACAAGACAGACATTGAATGATATATGCTTGCGTAGAAATTGGCCAATGCCATTGTATCGATGTGTCCATGAGGGTGGTCCTGCACATGCAAAGAGGTTTACATTTGCAGTACGTGTAAATACTTCCGATAGAGGATGGATAGATGAATGCATCGGAGAGGCTATGCCGAGTGTGAAGAAAGCCAAGGATTCTGCTGCAGCAGTTCTCTTAGAGCTCATAACTAAATGGTACTCCTCATGA
Protein Sequence
- >itb11g23510
MDGEARVSVNAADDLKPSYWIDACEDIPCDDFLHEYVNCDSHATATLASQTSNHEEPDPCFFGEIDHILENIKNGSSGDPPSTPCNVNGHENHASSPVTSETSCAFKDPKFNHRNGHLHMNNNVKPSESGFGRAWPECKGNGYSQLSDKGRYGKRALLSESMNERRNPDKPLGRKRLREFSDIDRRDRDQIKRREHQGFFKRERDWNEGRGYWERDKERNEMVFRTGLWEADRNREGKLPSGKSLEWNGGVEIKPEKPKEQPPEEQARQYQLDVLEQAKQKNTIAFLETGAGKTLIAILLIRSLYTDLQKQNKKILAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFETKQVLVMTAQILLNILRHSIIKMESINLLILDECHHAVKKHPYSLVMSEFYHTAPKGKRPSVFGMTASPVNLKGVSSQVDCAIKIRNLESKLDSVVCTVKDRKELEKHVPMPSEIVVEYDKAATLWSLHEQIKRMEVEVELAAQSSSRRSKWQFMGARDAGVKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAFKVAHSFLTALQSDERPNYQLDVKFQESYLSKVVSLLQCKLTEGAVAESNARVVDMDICKTLDSNMPDEIEEGELLDSYVVSGGEHVDVIIGAAVADGKVTPKVQSLIKVLLNYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTCQMQETIAKFRDGRVNLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNLSHETFLRNARNSEETLRKEAIERTDISHLKGASNLVSTEALPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPTDRYSILRPEFIMERHEKPGGPSEYSCRLQLPCNAPFDRLEGPVCSSMHLAQQAVCLDACKKLHEMGAFTDMLLPDKGSGTESEKVEENDEGDPLPGTARHREFYPEGVADILQGEWILSGKDDCDSSKFFHLYMYAVKCENVGSSKDPFLTQASEFAVLFGNELDAEVLSMSMDLFIARTVITKASLVFQGPVEITETQLASLKSFHVRLMSIVLDVDVEPSTTPWDTAKAYLFVPIAGGKSGDPVKGIDWDLVEKITRTDAWNNPLQRARPDVFLGTNERALGGDRREYGFGKLRHGLAFGLKSHPTYGIRGAVAQFDVVKASGLVPSRLTIKMCDTVKSSNSKLVMFDCCSRAEELIGRIVTAAHSGKRFYVDSVRYEMTAESSFPRKEGYLGPLEYSTYADYYKLKYGVDLLYRQQPLLRCRGVSYCKNLLSPRFEHSEGESEEIIDKTYYVFLPPELCFVHPLPGSLVRGAQRLPSIMRRVESMLLAVQLKDIISYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKGLQSYIQADRFSPSRWAAPGVPPVFDEDTYEGESSLFDQEILNATRAETYHDVDGYGDEETEDGELENDSSSYRVLSSKTLADVVEALIGVYYVEGGKHSANHFMKWIGIQIDFNSNDINNKICPSNIPENILRSVDFEALECALNIKFNDKGLLVEAITHASRPSSGVPCYQRLEFVGDAVLDHLITRYLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHSLHVHLRHGSSALEKQIRDFVFEVQNELSKPEFNSFGLGDCKAPKVLGDIVESIAGAVFLDSGCDTAAVWRVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKACRNGNIATVEVYVDGVQVGIAQNPQKKMAQKLAARNALVALKEKEAAEAANKGEDEEGKKKNCSQTFTRQTLNDICLRRNWPMPLYRCVHEGGPAHAKRFTFAVRVNTSDRGWIDECIGEAMPSVKKAKDSAAAVLLELITKWYSS