Information report for itb02g01020
Gene Details
|
|
Functional Annotation
- Encodes a PAF1 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast PAF1 is a component of a five-member complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5’] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin.
Homologous
- Actinidia chinensis: CEY00_Acc12681, CEY00_Acc17742
- Capsicum annuum: T459_11030
- Citrullus lanatus: Cla97C09G162100
- Cucumis melo: MELO3C024438
- Cucumis sativus: CsGy7G021580
- Daucus carota: DCAR_016188
- Glycine max: Glyma.07G015500, Glyma.08G201000
- Gossypium hirsutum: Gohir.A09G081200
- Manihot esculenta: MANES_11G033700
- Nicotiana attenuata: A4A49_24873
- Prunus persica: PRUPE_1G178600
- Rosa chinensis: RchiOBHm_Chr2g0140531
- Sesamum indicum: SIN_1009546
- Vitis vinifera: VIT_09s0002g03510
Gene Resources
- Pfam: PF03985
Sequences
CDS Sequence
- >itb02g01020
ATGGATTCTTATAGGCCATTCCAGCCCCCGTCGCAACCCGCGTTTGCTCCTCCTCCTCCCCCACCGCCGAATCAGAATCCTCTGCAACCTCCCCCGCCAGCATCCACCGCAGGGCAGCCGCGAGGGAATCAGCCATCTCAGAATTGGGGGGGATACGGTAATTATCAACATGCGCCGCCGCATTTTAGCGGCCCTATTCCGCTGCCACCACCACCCCAGTCTCATCAGTATCCGCCACCCCCGCCTCCGCCGGATTCTTCGTACCCTCCTCCACCACCGCCACCACAAGCTGCTCCCCCAGCTCCACCAGTGTATTATCCTTCTTCTCAATACTCGCAATACAACCAACACCAGCATTTACAACCCCCACCTCCACCTCCTCCACCTTCCTCTCCTCCCCCAAATTCAGCAATTCCTCCTCCTCCGCCACCTTCTTCACCCCCACCACCCCCTTCCTCAGCTCCCCCTGCGCATCCAAGTAATGAAAGCAGGCCTGCAGCTGAGAAAGCAGCTCCCAAGGATGGAAGGGATTCTGGGTGGCGAGAATCAGGGCATGGGAATCACGGGATACCCTCTAAGCAGAAACCTCCTGTTCCTCCCATGCAAGTGAAGAAACCAAATGCTCCTTCTGGAAGAGTTGAGACAGAGGAAGAGAGGAGGTTGCGGAAGAAGAGAGAGTATGAGAAACAAAGGCATGAAGAGAAACATAGGCATCATTTAAAAGAATCCCAGAACAAGGTGCTGCAGAAGACCCAAATGCTAACTTCTGGAGCGAAGGGTCATGGTTCCATTAGTGCATCACACATGGCTGACAGGAGAACTGCTCCTTTGTTAAGTGGGGAGAGAACTGAAAATCGGTTGAAGAAGCCAACAACATTTCTCTGCAAGCTGAAGTTCCGAAATGAATTGCCAGATCCAACAGCACAGCCAAAGCTCATGTCTTTAAGAAGAGACAAAGATAGATTTACCAAATACACCATCACTTCATTAGAGAAAATGCACAAGCCTCAACTATATGTTGAACCAGATCTCGGAATCCCTCTTGACCTGCTTGATCTCAGTGTATATAACCCCCCCAAGGGTGAAAGGACTCCCCTGGATCTCGAGGATGAGGCCTTGTTGCGTGATGATGATCCTGTAACCCCTATCAAGAAAGATGGCATTAAAAGGAAAGACAGGCCAACTGACAAGGGTGTTTCTTGGCTAGTCAAAACACAATATATATCTTCTCTAAGCATGGATTCAACAAAACAGTCTCTGACTGAAAAGCAAGCGAAGGAATTACGAGAAAATAAAGGAGGCCAAAACATTTTGGAGAACCTTAATAACAGGGATAGACAAATAAAAGAAATTAAGGCTTCTTTTGAGGCATGCAAGTCACGACCTGTTCATGCAACCAATCCAAAACTACAGCCTACTAAAGTTTTACCCCTTTTCCCAGACTTTGATCGGTACAAAGACCAGTTTGTGGTTGCTACATTTGATAGTGCTCCTACTGCTGATGCAGAAAACTATAGCAAGTTAGACAAGGCTATTCGAGATGAACATGAATCTCGGGCAATTATGAAAAGCTTTGTCGCAAGAAACTCAGATGCTGCTAAACCTGATAAATTTCTGGCATATATGGTCCCTTCACCCAATGAGCTGGAGAAGGATATGTTTGATGAAAATGAGGATATCTCGTATGCATGGGTTCGCGAATATCACTGGGATGTACGTGGTGATGACACAGATGATCTAACCACATTCCTTGTGGCCACTGGCAAATCAGAGGCACGCTACATGCCTGTTCCAACAAAACTCTCATTGAGAAAAAAGAGGGCCAGAGAAGGAAAATCAATCGAAGAAGTAGAACAGTTTCCCATACCTGCAAGAGTGACAGTAAGGAATAGACAAACAGTAGCTGCCATTGAATTGAAAGATGAAGGGGGTTATTCAAGTTTCAAGGGGAGTGGTTCAGATTCTAAGAGATCAAGAATGAGCTTGGAAGATGGTTTACATTCAGAGAAGGGTATGCATGACAGTGATGAAGACCAATCTAGTGGCGGTGAATATGAGTTATCTGATTGA
Protein Sequence
- >itb02g01020
MDSYRPFQPPSQPAFAPPPPPPPNQNPLQPPPPASTAGQPRGNQPSQNWGGYGNYQHAPPHFSGPIPLPPPPQSHQYPPPPPPPDSSYPPPPPPPQAAPPAPPVYYPSSQYSQYNQHQHLQPPPPPPPPSSPPPNSAIPPPPPPSSPPPPPSSAPPAHPSNESRPAAEKAAPKDGRDSGWRESGHGNHGIPSKQKPPVPPMQVKKPNAPSGRVETEEERRLRKKREYEKQRHEEKHRHHLKESQNKVLQKTQMLTSGAKGHGSISASHMADRRTAPLLSGERTENRLKKPTTFLCKLKFRNELPDPTAQPKLMSLRRDKDRFTKYTITSLEKMHKPQLYVEPDLGIPLDLLDLSVYNPPKGERTPLDLEDEALLRDDDPVTPIKKDGIKRKDRPTDKGVSWLVKTQYISSLSMDSTKQSLTEKQAKELRENKGGQNILENLNNRDRQIKEIKASFEACKSRPVHATNPKLQPTKVLPLFPDFDRYKDQFVVATFDSAPTADAENYSKLDKAIRDEHESRAIMKSFVARNSDAAKPDKFLAYMVPSPNELEKDMFDENEDISYAWVREYHWDVRGDDTDDLTTFLVATGKSEARYMPVPTKLSLRKKRAREGKSIEEVEQFPIPARVTVRNRQTVAAIELKDEGGYSSFKGSGSDSKRSRMSLEDGLHSEKGMHDSDEDQSSGGEYELSD