Information report for HanXRQChr16g0522401
Gene Details
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Functional Annotation
- Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.
Homologous
- Citrullus lanatus: Cla97C05G081810
- Glycine max: Glyma.16G035100, Glyma.07G069400, Glyma.18G234700
- Juglans regia: Jr12_04090, Jr12_04100, Jr07_06900
- Manihot esculenta: MANES_05G032800, MANES_01G255300
- Populus trichocarpa: POPTR_002G160900v3
- Prunus avium: Pav_sc0000254.1_g1560.1.mk
- Prunus persica: PRUPE_2G172900
- Vitis vinifera: VIT_15s0046g02290
Gene Resources
- Pfam: PF00271 PF00176
- UniProt: A0A251S1A1
- EMBL: CM007905
- AlphaFoldDB: A0A251S1A1
- OMA: HPMQNLA
- InterPro: IPR000330 , IPR014001 , IPR014978 , IPR027417 , IPR038718
- PANTHER: PTHR10799
- SUPFAM: SSF52540
- PROSITE: PS51192 , PS51666
- Gene3D: 3.40.50.10810
- STRING: 4232.A0A251S1A1
Sequences
CDS Sequence
- >HanXRQChr16g0522401
ATGTGTGTAGCTTTTCTGTTTTCACATGTGTTGATGTGTGCATTGCAGCAACAGTTACTAAGAAACCCTGAAGGGAGAGAAGCTATATTAGCATATCAAGCTGGAATCAGGCAGGGAGGATTAGGAGGTGGTGTTGCTTCGGGTTCGAGCGCGATGCAACAAATGCAACGGGTGTCTCAGCAGCATGGCCAAGAGGAAGGGCAAAGTGGAAGACTTGGTTTTGATCAACACATGATGAATCCGATGCAACAGGCGTATATGCAGTATGCGCTTCATGCTCAACAAGCGCAACAGAAGTCTTCGTCGGGTATGCAAGCGCAGCAGCAGATGAAAATGGGAGTGATGGGGAAAGATCAAGAGTTGAATATGGGAAATGCAAGATTGCAGGATGCCTTTGCATTTCAGGCACAGGTTTTGTCTTCCAAGAAACCTTCAGATCAATTTGGGCATGGAGGGAAGCAGGTTATGGAGGAAAACAATCAGGCGGTTTCTGATCAAAGTCAAAGTGAGAGTCAAGGTCAAAGTAGAATTCAAAATCAGAAGCATTTTGGTGTTCCGACATCGTTTGGGCAGGTGATACCAGGGAGTAATTTGGGACCGATGCAAGCTGCACAAGCTCAACAGGGTATGCATAATATGGGAAACAGCCAGGTGGCAATGGCTGCACAAATGCAGGCGATGCAGGCTTTGGCTCTTGAGCGTAACATTGATCTTTCGCTTCCGCAAAATGCTAATCTGATGGCACAACTAATGCCGATCATGCAGTCTAGGATGCTTGGGCAACAAAAAGCCAACGAAAGCAACATGGGCCCACAGTCAAAGCAGCAGGTCACTTCACCACAAGTCGCAAATGAAAGTTCTCCCCATAGTGATGTATCGGGTCATTCAGGCTCTACAAATGCAAGGCAGGCAATGTCACCTGGCCATATCGGGTCAACCCAAAATGCCCCCTTGGTCAACAATTCTAGTGGTGGTCAAGGTCAACAGTTTTCTATTCATGGGAGGGAGAACCAGTTGGCACCTAGGCAACCCACTGTTAACGGTAGTGGTATGTCTTCTATGCCGCCCCCACAGTCACCTGCTAACATGAGCCAGGGTGGTTCAGATCATTTTAGCAAAAACACAGTAACTGGTTCTGAATCGTTGCCGATACAGCATGCTAGACAGCAAATGAACAGGTCTTCATCTAATAATGTTGGATTGGATATACCAAAACCACCCACGAACTTTACGAAACAGCAACTTCATGTTCTTAAAGCCCAAATTCTTGCTTTTAGGCGTATAAAGAAAGGAGAGAAAATTCTGCCTCGGGAATTACTTCAAGCTATCACACCGCCTCCACTTGAAGTGCAGTTGCAGCAGATTAATGCCCCTGCTGGTAGAAATCTTATGGATTCGAAAAACAAAGATCTTCAGGCTGTGACATCGTCTGCTGGGATGAATAATCCGAAAAGCGAAACACATGAGGAGAAAGCAATTGCAGGTACAACAGCTAATGCACAAGGTACAACTGTAATTAACGAAACTCCATCGGTTTCTCTTCCTGCGAAAGAAGAACAGAGAAATCCTGCAATTCCTACCAAACAGGAACATGAGGTAGAACATGGGAATCAGAGAACTTCTCATGTAGGTGAGGGTCCCACAGACAAAGGTAAGGCGGTTGCGGTTGCATCTACCAATGCTGTTGTCTCGCAATCGGTAAATCCGTCTCAAACGAAAGATCCCGGTCCTTCTAGAAAGTACCATGGCCCGCTGTTTGACTTTCCTTTCTTCACTCGGAAACATGATTCTTTTGGATCGAGTATGATGCTCAACAACAATAACAATCTAACTCTAGCATATGATGTGAAGGATCTCCTTGTTGACGAAGGCGTAGAAGTGATTAACAAAAAGAAAAACGAAAGTTTAAAAAAGATCAATGGCTTACTAGCTGTAAATCTGGAGAGAAAAAAGATAAGGCCGGATCTTGTTTTAAGGTTACAGATTGAAGAAAAGAAACTTCTACTACAAGATTTACAGACACGCGTGAGAGAAGAAGTTGATCAGCAACAGCAGGATATAATGGCTATGCCAGATAGACCATATAGGAAATTTGTTCGGTTATGTGAACGCCAACGAATGGAGCTCAAGAGACAAGTACAAGCTGCTCAAAGAGCCATTAGAGCGAAACAGCTGAAAATTATTTTCCAGTGGCGTAAGAAGCTTCTAGAATCTCACTGGGCTCTCCGCGATGCACGGACTTCACGTAACAAGGGTGTTGCTAAGTATCATGAGAAGATGTTGAGGGAATATTTCAAGAATAACGATGGGGACGATCGTAGTAAAAGAATGGAAGCGTTGAAAAATAATGATGTTGAGAGGTATAGAGAGATTCTCATGGAGCAACAAAATAGCGTCCCCAGTGAGGCTGCTGAGAGATACGAGGTTTTATCTTCGTTTTTATCTCAGACCGAAGATTATCTCAATAAACTTGGAGGCAAAATTACATCCGCCAAGAATCAACAGGATGCTGAGGAGGCTGCGAATGTTGCATCTGCAGCTGCAAGAGCTCAGGGTCTATCTGAAGAAGAAGTGAGGGCTGCAGCATCTTGTGCGAGGGAAGAAGTTATAATAAGAAACCGTTTCTCTGAAATGAATGCACCCCAAGATAGTTCATCTGTTAGCAAATATTATACTCTTGCACATGCTGTCAGTGAAAGGGTCATACGGCAACCCTCAATGCTTCGAAAAGGAACCTTACGTGACTATCAGCTTGTTGGATTGCAGTGGATGCTTTCATTGTATAACAATAAATTGAATGGTATATTGGCTGATGAAATGGGTCTCGGGAAAACTGTCCAGGTTATGGCTTTGATTGCTTATCTGATGGAGTTCAAAAGCAACTATGGCCCACATCTTATAATCGTTCCAAATGCTGTTCTGGTTAACTGGAAGAGTGAGCTGCATAATTGGTTACCAAACGTGTCCTGTATCTACTACGTCGGTAACAAAGATCAGCGGTCAAAGTTGTTTACCCAAGAGGTTTCCAAACTGAAATTCAATGTCCTCGTGACAACTTACGAATTTGTCATGTTTGATAAAACGAAACTTTCTAGAGTTGACTGGAAATATATAGTTATTGACGAAGCACAAAGAATGAAGGACCGAGAGTCTGTTTTAGCACGCGATCTTGACAGATATCGATGCCAAAGGCGGCTTCTTCTCACTGGGACCCCCTTACAGAATGATCTTAAAGAGCTCTGGTCATTGTTGAATCTGCTGCTTCCTGATGTGTTTGACAATCGAAAAGTGTTTCATGATTGGTTTTCACAGCCTTTCCAAAAAGAAGGCGCGCACAATGCTGAAGATGATTGGCTCGAAACCGAGAAAAAAACGTCGTGTTGA
Protein Sequence
- >HanXRQChr16g0522401
MCVAFLFSHVLMCALQQQLLRNPEGREAILAYQAGIRQGGLGGGVASGSSAMQQMQRVSQQHGQEEGQSGRLGFDQHMMNPMQQAYMQYALHAQQAQQKSSSGMQAQQQMKMGVMGKDQELNMGNARLQDAFAFQAQVLSSKKPSDQFGHGGKQVMEENNQAVSDQSQSESQGQSRIQNQKHFGVPTSFGQVIPGSNLGPMQAAQAQQGMHNMGNSQVAMAAQMQAMQALALERNIDLSLPQNANLMAQLMPIMQSRMLGQQKANESNMGPQSKQQVTSPQVANESSPHSDVSGHSGSTNARQAMSPGHIGSTQNAPLVNNSSGGQGQQFSIHGRENQLAPRQPTVNGSGMSSMPPPQSPANMSQGGSDHFSKNTVTGSESLPIQHARQQMNRSSSNNVGLDIPKPPTNFTKQQLHVLKAQILAFRRIKKGEKILPRELLQAITPPPLEVQLQQINAPAGRNLMDSKNKDLQAVTSSAGMNNPKSETHEEKAIAGTTANAQGTTVINETPSVSLPAKEEQRNPAIPTKQEHEVEHGNQRTSHVGEGPTDKGKAVAVASTNAVVSQSVNPSQTKDPGPSRKYHGPLFDFPFFTRKHDSFGSSMMLNNNNNLTLAYDVKDLLVDEGVEVINKKKNESLKKINGLLAVNLERKKIRPDLVLRLQIEEKKLLLQDLQTRVREEVDQQQQDIMAMPDRPYRKFVRLCERQRMELKRQVQAAQRAIRAKQLKIIFQWRKKLLESHWALRDARTSRNKGVAKYHEKMLREYFKNNDGDDRSKRMEALKNNDVERYREILMEQQNSVPSEAAERYEVLSSFLSQTEDYLNKLGGKITSAKNQQDAEEAANVASAAARAQGLSEEEVRAAASCAREEVIIRNRFSEMNAPQDSSSVSKYYTLAHAVSERVIRQPSMLRKGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKSNYGPHLIIVPNAVLVNWKSELHNWLPNVSCIYYVGNKDQRSKLFTQEVSKLKFNVLVTTYEFVMFDKTKLSRVDWKYIVIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKVFHDWFSQPFQKEGAHNAEDDWLETEKKTSC*