Information report for HanXRQChr16g0518821
Gene Details
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Functional Annotation
- Light-labile cytoplasmic red/far-red light photoreceptor involved in the regulation of photomorphogenesis. It exists in two inter-convertible forms: Pr and Pfr (active) and functions as a dimer.The N terminus carries a single tetrapyrrole chromophore, and the C terminus is involved in dimerization. It is the sole photoreceptor mediating the FR high irradiance response (HIR). Major regulator in red-light induction of phototropic enhancement. Involved in the regulation of de-etiolation. Involved in gravitropism and phototropism. Requires FHY1 for nuclear accumulation.;Phytochrome A gene 2;Encodes photoreceptor phytochrome A
Homologous
- Actinidia chinensis: CEY00_Acc10700, CEY00_Acc18797
- Capsicum annuum: T459_25337
- Gossypium hirsutum: Gohir.A13G172900, Gohir.D13G178700
- Lactuca sativa: gene-LSAT_9X83701
- Manihot esculenta: MANES_09G182500
- Nicotiana attenuata: A4A49_01197
- Populus trichocarpa: POPTR_013G000300v3
- Prunus avium: Pav_sc0001938.1_g560.1.mk
- Prunus persica: PRUPE_6G302500
- Sesamum indicum: SIN_1025955
- Solanum lycopersicum: Solyc10g044670.2
- Solanum tuberosum: PGSC0003DMG400015766
- Vitis vinifera: VIT_14s0060g00100
Gene Resources
- Pfam: PF01590 PF02518 PF00989 PF08446 PF00360 PF00512
- UniProt: A0A251S4R9
- EMBL: CM007905
- AlphaFoldDB: A0A251S4R9
- OMA: ALQSYKF
- InterPro: IPR000014 , IPR001294 , IPR003018 , IPR003594 , IPR003661 , IPR005467 , IPR012129 , IPR013515 , IPR013654 , IPR013767 , IPR016132 , IPR029016 , IPR035965 , IPR036890 , IPR043150
- PANTHER: PTHR47876 , PTHR47876:SF3
- SUPFAM: SSF55781 , SSF55785 , SSF55874
- PROSITE: PS50046 , PS50109 , PS50112
- Gene3D: 3.30.450.20 , 3.30.450.270 , 3.30.450.40 , 3.30.565.10
- CDD: cd00130
- STRING: 4232.A0A251S4R9
Sequences
CDS Sequence
- >HanXRQChr16g0518821
ATGCAACAATTTTCATATGACGTAGCAGACTCATTTTCATTCATATTCTTCATCACCTTTCTTAAGTTGCATGGCCCCCACCAACCAACAAATTGTATAAGTCTTGTAATCTATCTAACTACTGAAAATTCTTGTGTTATTATTCAGATTTTGTTCATTATGTCTGCTTCAAGGCTTACTGAATCATCAACCAGTGCTGGTAGAGCAATACACAGTACTAGAATCAACCAGCAAACCACTGTGGATGCAAAACTCCATGCAGATTTTGAGGAATCAGGTGAATCATTTGATTACTCTAGTTCGGTGCGCACCGCGGTGGTTGAAGGGCAACCGCCTTGTTCCGATAAGGTAACCACAACTTACCTCCACCACATCCAAAAGTGTAAGTTAATTCAGCCTTTTGGATGCTTATTAGCCATAGATGACAAGACTTATAGAGTAATTGCCTATAGCGAAAACGCCCCCGAAATGCTCACAACTGTGAACCACACGGTGCCCGTCGTCAGTGAGAATCCAGTTATCGGTATGGGAACCGATGTTAGAACTGTATTTGCCGGTCCCAGTGCGAATGCGTTGTTTAAAGCCTTAACATTTGGGGAGGTATCTTTACTGAATCCCATTTTGGTCCACTGTAAAACATCTGGGAAGCCATTTTATGCGATTATCCATCGGGTAACAGGTAGTTTGATCATAGATTTTGAGCCTGTTATGCCTAACGAAGCCCCAATGACAGCTGCGGGTTCCCTACAGTCTTACAAACATGCAGCCAAAGCGATAGCTAGGTTACAATCTTTGCCTATTGGCAGCATTGAACGACTGTGTGACACGATGGTCCAGGAGGTTTTCGAGCTCACTGGATATGACCGAGTCATGGCTTATAAATTCCATGATGATGATCATGGTGAGGTGGTGGCTGAGATCACTAAACCCAGGCTTGAACCATACCTTGGGTTACATTATCCTGCCACTGACCTCCCTCAGGCTGCAAGATTCTTGTTCATAAAGAATAAGGTCCGAATGATTTGTGATTGTCGAGCTAAAAATGTAAAGGTAGTTCAAGACAAGAAGTTACAGTTTGATTTATCGTTATGCGGGTCGACCCTCCGGGCTACACATAGTTGTCATCTGCAGTTTATGGAGAACATGACCTCTATTGCCTCTTTGGTTATGGCTGTTGTGATGAATGATGCAGATGAAGAGTGTGAAAACTCTAAATCTCAAAAAAGGAAGAGGCTTTGGGGCTTGGTGGTGTGTCATAACACATCTCCAAGATTTGTCCCATTTCCATTGCGTTGTGCGTGCGAGTTTTTAGCACAAGTTTTTACGGTTCACATCAATAAAGAACTAGAACTGGAGTACCAGCTTATGGAGAATAATATCTTAAGAACACAAACGCTTTTATGTGATTTGCTAATGCGGGATGCTCCTTTAGGCATTGTGTCACAGAGCCCGAACATTTCGGATCTCGTGAAATGTGATGGGGCATGTCTTTTGTACCAAGATAAGGTTTACCAAATTGGGGTGAGCCCTACCGAGCATCAGATTCACGATATAGTCTCATGGCTCTATGAATGCCATATGGATTCAACAGGATTGATTACTGATAGTTTGTATGATGCAGGATATCCTGGGGCTCTAGCTCTTTGTGGTGTTTGTGGGATGGCATCGGTTAAGCTAACCGGAAAAGATATTCTTTTTTGGTTTAGATCCGGCACAGCTTCAGAGGTTCGATGGGGTGGGGCAAAACATGAGAAGGGTGAAAAGGATGATGGTAGGCGAATGCACCCGAGGTCTTCGTTTAAAGCTTTCTTGGAAGTTGTGAAACATAGGAGCTATCCATGGAAAGAGTTTGAGATGGATGCAATTCACTCATTGCAGCTTATGATGAGGAATGCTTTGAAAGAGAATGAAGCTGCAGTTTTGAACTACTCCAAAGTGATTCAGGCCAGTTTTCATGAGCTTAGGCTTGACAGAATGCAAGAACTAGAAGCTGTCACAAGTGAGATGGTCCGGTTGATTGAAACTGCTTCAGTTCCAATACTTGCATTCGATAGTGATGGCTTCATAAACGGATGGAACCCAAAAATTGCTGAGTTGACTGGTTTGACCGTAGAAGAAGCTATCGGGCGCCAAATTCTCACACTTGTTGAAGATTCTTCAGTTGACATAGTCCAAAAGATGCTAAGTTTGGCAGTGCAAGGAATAGAAGAAACAGGTGTCCGATTTGAAATCAAAACATATGGGTCAAAGACAGGGTCTGGACCGATCACACTTGTGGTAAATGCCTGTTCAAGAATGGATGTAAACGAAAATGTTGTGGGTGTATGTTGTATTGCCCACGATATAACTTACCAAAAGACTATAATGGACAAGTTCACACGAATAGAAGGCGATTACAAAGCTATCGTGCATAGCCCCAACCCACTGATTCCCCCAATCTTTGGAACTGATGAATTCGGTTGGTGTTCTCAATGGAACCAAGCCATGACAGACTTATCTGGACTATCAAGAGAGCAAGTGATTGGTAAAATGCTTTTGGGTGAGGTTTTCGGGATCCATGGAGCACAATGTCGGCTCGGTAGTCATGAGACGTTCATAAACACCAGCATTGTTCTTAATAAAGCTATGCTTAGTCAAGAAGCAGAAAAGATTTCATTCGGGTTCTATGCTAAAACTGGAAAGTACGTAGATTGTGTGCTGTGTGCTAGCAAACGCGTGGATAGTAAGGGTACAGTTAATGGGCTTTTCTGCTTCTTGCAGCTACCAAGTAAAGATCTTCAACAAGCTATCCATTATCAAAGAATGAATGCGCGAGTTGCAGCCAAACTACTTAAAACATTAGCGTATGTAAGAAGACAGGTGAAAAATCCGCTATCCGGAATATTATTTTCAAGAAAAATGCTGGAGGAAACCGAGCTAGGAGATGATCAAAAGGAGCTTCTTCACGCAAGTGCTTTGTGTCAGCAACAACTCAATAAAGTAGTTGATGACACCGATCTTGATGGTATTGTAGACGGGTATTTCGATCTTGAAATGACTGAGTTTACACTCCAGCAGATCTTAGGGGCCTCCATGAGTCAAGTAATGACAAGGAGCAACGAAATGGGCATTCAAATAGTGAACAATATCGCACAAGATACGTTGTTTGAGAAACTATACGGGGATAGTGTGAGGCTTCAGCAGGTTCTTGCAGAATTCTTGTCACTATCAGTCTCTTGTACACCACCTAGTGGCATGGTCATAATCGCAGCCAGTATGACGAAAAACCATCTTGAAAGATTAGTTCCACTTGTGAATCTAGAGCTCAGGATAACACACACCGGAGATGGTGTGCCAGAGGACCTGGTAAGACAGATGTTTGGAAGCAGTGTCGACGCAACTGAGGAGGGAATAAGCTTACTGATCAGCAGAAATCTGTTAAAGCTCATGAGTGGAGACGTGCATTACCTGAGGGAGGCCGCAAAGTCGACTTTCATAATATCTGTTGAACTTGCCTCTGTTGGTTCAAAGAAGACATGA
Protein Sequence
- >HanXRQChr16g0518821
MQQFSYDVADSFSFIFFITFLKLHGPHQPTNCISLVIYLTTENSCVIIQILFIMSASRLTESSTSAGRAIHSTRINQQTTVDAKLHADFEESGESFDYSSSVRTAVVEGQPPCSDKVTTTYLHHIQKCKLIQPFGCLLAIDDKTYRVIAYSENAPEMLTTVNHTVPVVSENPVIGMGTDVRTVFAGPSANALFKALTFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVMPNEAPMTAAGSLQSYKHAAKAIARLQSLPIGSIERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVAEITKPRLEPYLGLHYPATDLPQAARFLFIKNKVRMICDCRAKNVKVVQDKKLQFDLSLCGSTLRATHSCHLQFMENMTSIASLVMAVVMNDADEECENSKSQKRKRLWGLVVCHNTSPRFVPFPLRCACEFLAQVFTVHINKELELEYQLMENNILRTQTLLCDLLMRDAPLGIVSQSPNISDLVKCDGACLLYQDKVYQIGVSPTEHQIHDIVSWLYECHMDSTGLITDSLYDAGYPGALALCGVCGMASVKLTGKDILFWFRSGTASEVRWGGAKHEKGEKDDGRRMHPRSSFKAFLEVVKHRSYPWKEFEMDAIHSLQLMMRNALKENEAAVLNYSKVIQASFHELRLDRMQELEAVTSEMVRLIETASVPILAFDSDGFINGWNPKIAELTGLTVEEAIGRQILTLVEDSSVDIVQKMLSLAVQGIEETGVRFEIKTYGSKTGSGPITLVVNACSRMDVNENVVGVCCIAHDITYQKTIMDKFTRIEGDYKAIVHSPNPLIPPIFGTDEFGWCSQWNQAMTDLSGLSREQVIGKMLLGEVFGIHGAQCRLGSHETFINTSIVLNKAMLSQEAEKISFGFYAKTGKYVDCVLCASKRVDSKGTVNGLFCFLQLPSKDLQQAIHYQRMNARVAAKLLKTLAYVRRQVKNPLSGILFSRKMLEETELGDDQKELLHASALCQQQLNKVVDDTDLDGIVDGYFDLEMTEFTLQQILGASMSQVMTRSNEMGIQIVNNIAQDTLFEKLYGDSVRLQQVLAEFLSLSVSCTPPSGMVIIAASMTKNHLERLVPLVNLELRITHTGDGVPEDLVRQMFGSSVDATEEGISLLISRNLLKLMSGDVHYLREAAKSTFIISVELASVGSKKT*