Information report for HanXRQChr13g0389811
Gene Details
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Functional Annotation
- Encodes a ubiquitin-specific protease, and its activity has been confirmed in an in vitro assay. ubp15 mutants have defects in cell proliferation, and the associated processes of leaf, root, stem, flower, and silique development. UBP15 can be found in the nucleus and cytoplasm in transient assays. Though UBP15 is expressed in many tissues, UBP15 transcript levels are higher in rosette leaves and inflorescences than in other parts of the plant.
Homologous
- Actinidia chinensis: CEY00_Acc13535
- Brassica napus: BnaC08G0238600ZS, BnaA08G0263500ZS, BnaC05G0144000ZS
- Brassica oleracea: Bo5g023460, Bo8g066960
- Brassica rapa: Bra026003, Bra016618
- Gossypium hirsutum: Gohir.D01G030100, Gohir.A01G042100, GhUBP15
- Lactuca sativa: gene-LSAT_9X101220
- Populus trichocarpa: POPTR_001G378900v3
- Prunus avium: Pav_sc0000095.1_g1130.1.mk
- Prunus persica: PRUPE_4G150400
- Vitis vinifera: VIT_19s0140g00200
Gene Resources
- Pfam: PF00443 PF01753
- UniProt: A0A251SP77
- EMBL: CM007902 , MNCJ02000328
- AlphaFoldDB: A0A251SP77
- OMA: HECARCS
- InterPro: IPR001394 , IPR002893 , IPR018200 , IPR028889 , IPR038765 , IPR050164
- PANTHER: PTHR24006 , PTHR24006:SF685
- SUPFAM: SSF144232 , SSF54001
- PROSITE: PS00972 , PS50235 , PS50865
- Gene3D: 3.90.70.10 , 6.10.140.2220
- OrthoDB: A0A251SP77
- CDD: cd02661
- STRING: 4232.A0A251SP77
Sequences
CDS Sequence
- >HanXRQChr13g0389811
ATGCTCCAGCCAAGACAAACTGATTTACCGTTCCTGTTTCTGGTGTTGGTTGTACTTCCTCTTGCTGCTTACGTTTTATTAGGAAAATGGGGCGACTTCTCAAAAAAGAAAGTGAAGATTAGCGAGCTTGCTCAAATTGCTGCTGAAGAAGCTTTCCGAGCAGAAGCCATGGCTGCTGCTGCTGTTATTCCTCTTGTACCTGTGTTAAAGTTAGATAACGGGTTTCATCAATGTGCTCGATGCTTCGGGCCAGCGAAAACCCGCTGTTCTCGTTGCAAATCTGCCCGCTACTGTTCTGGCAAGTGTCAAATAGTTCATTGGAGACAAGGTCACAAACAAGAGTGCCAACTTTTGGAGTACAATAGTAGCTGTGCGTCTCCAAATTCTGAAGAATTTGTTGATGAACAGTTTTTATCAAGTGAAACGTTGGATTTCCAGTTTTCTGAATCCAATTTTAAGCAGTTTCACGAGAAAGCTGCATCGCGTAGTAGTTCTTTCAATTTATATAGGGAGATGTCAAGAAAAGAAGAGAATGTCGTTGCTGAGCCGTCTGTAGATACATGTTCCACTTCGTACGATAAACCTTCATCAAAGGGAACTTTCGTTAGACATAAGCAGCCAAAACGGGGTCGCCCTGTGCCCCCGAAAGAAGAAGGTAATGGGACAAATTCGTTAGATGTTGAAAGGGAATTGGTGGATGGATGGAGTGAAAGAAGCCATGCAAAGAAATGTAATACGGTGAAATCAACATCACATTCTTTGGGAGCTACAAAATCAACAGCGAAATGGTCAAGAGATCAAATATGTCCCAAAAGGGAATGTATGGATCAAGTTGACACTGCATTGGAGGATTCTAGAGTGGGTGATGTAAACCCTCCACACGAAGGCAGTGGTATTGTTAACAAAGGTTTTATGAAGATGATTGGTCTAAAGAGGTCATCAAAGCATGACAGAGTGGAACGTGTGGAAGTTAATAGCGACAAACATAATAAGAAAATAAAAATGCTATTTCCATATGAGGAGTTTGTGAAGTTCTTTCAGTATGAAGCTTTTAACCTTTTACCAAGGGGGCTCATAAATTGTGGGAACAGCTGTTACGCGAATGCTGTGCTGCAATGTTTGACTTCTACCAAGCCTTTGACCGTCTATTTACTCCGCCAATCACATTCTAAATCTTGTGGTGCGAGAAGTTGGTGTCTTATTTGTGAGCTCGAACGTCACGTGTTACTGTTACGTGATAATGGAGACCCACTGTCACTCAGTAAAATTCTTTTGAATATGCGGGCTGTTAATAATAAAATGGGCGATGGAAGTCAAGAAGACGCACACGAGTTTTTAAGGCTTCTAGTTACATTAATGCAATCTATATGTCTTGAGGGTTTTGGTGGTGAATCTGTCAATCCCAAACTGCAAGAAACGACCTTTATTCAGCATACGTTTGGGGGGCAGCTTCGATCAAAGGTCAAGTGCTTGAGATGCAATCGCGAGTCTGATAGATATGAAAACATTATGGATCTTACACTCGAGATATTCGGATGGGTTGAATCGTTGGAAGATGCACTGACTCAATTCACAAGCCTTGAAGAATTGGATGGAGAAAACATGTATAGATGTGCAAGGTGTGCTGCTTATGTTCCGGCACAAAAGCAGTTAGCTATACAAGAGGCTCCAAATATTCTCACCATTGTTTTGAAGAGATTTCAGGAGGGAAGCTACGGGAAGATAAACAAGTGTATAACGTTTCCTGACATGTTGGATATGATCCCGTATATGACGGGGACAGATGATGTTCCTCCATTATACATGCTTTATAGTGTTGTTGTGCATTTAGACACAATGAATGCATCTTTCTCCGGTCATTATATCTCATATGTGAAAGATCTTCAAGGCAATTGGTTCAGGATAGACGACACACAGGTGCAACCCGTCCCGTTGAGCCAAGTGATGTCAGAAGGCGCGTACATATTATTCTACATGAGATCATCCCCTCGACTCCTAAGAATGTGTACAGCAGGAAAACCGAAAGCTTCTAGAGCTCCTAAGTCAACCTCGGGTCAAGAAACTGTGTCAAACCGAAACCAAGCAACATCATGCGTTGACTTTTCAGATGCTGCATCAAGCGACTGGTCGATCTTTACAAGCTCGGACGATGCATCTTTCACTACTGAAAGCACCCGGGACTCGTTTAGCACCATTGACAACACTGACAATAACTTACCGTATGTTCCTCCTGATTATAGCGTCTCATGTGGCAGGTTTTCAAGAAGTAGACCCCACTTGATATCGAAATTGTATCATGGGTGTGAGCCACCATACCGAATATAA
Protein Sequence
- >HanXRQChr13g0389811
MLQPRQTDLPFLFLVLVVLPLAAYVLLGKWGDFSKKKVKISELAQIAAEEAFRAEAMAAAAVIPLVPVLKLDNGFHQCARCFGPAKTRCSRCKSARYCSGKCQIVHWRQGHKQECQLLEYNSSCASPNSEEFVDEQFLSSETLDFQFSESNFKQFHEKAASRSSSFNLYREMSRKEENVVAEPSVDTCSTSYDKPSSKGTFVRHKQPKRGRPVPPKEEGNGTNSLDVERELVDGWSERSHAKKCNTVKSTSHSLGATKSTAKWSRDQICPKRECMDQVDTALEDSRVGDVNPPHEGSGIVNKGFMKMIGLKRSSKHDRVERVEVNSDKHNKKIKMLFPYEEFVKFFQYEAFNLLPRGLINCGNSCYANAVLQCLTSTKPLTVYLLRQSHSKSCGARSWCLICELERHVLLLRDNGDPLSLSKILLNMRAVNNKMGDGSQEDAHEFLRLLVTLMQSICLEGFGGESVNPKLQETTFIQHTFGGQLRSKVKCLRCNRESDRYENIMDLTLEIFGWVESLEDALTQFTSLEELDGENMYRCARCAAYVPAQKQLAIQEAPNILTIVLKRFQEGSYGKINKCITFPDMLDMIPYMTGTDDVPPLYMLYSVVVHLDTMNASFSGHYISYVKDLQGNWFRIDDTQVQPVPLSQVMSEGAYILFYMRSSPRLLRMCTAGKPKASRAPKSTSGQETVSNRNQATSCVDFSDAASSDWSIFTSSDDASFTTESTRDSFSTIDNTDNNLPYVPPDYSVSCGRFSRSRPHLISKLYHGCEPPYRI*