Information report for HanXRQChr09g0276241
Gene Details
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Functional Annotation
- Encodes a PAF1 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast PAF1 is a component of a five-member complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5’] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin.
Homologous
- Actinidia chinensis: CEY00_Acc17742
- Capsicum annuum: T459_11030
- Citrullus lanatus: Cla97C09G162100
- Cucumis melo: MELO3C024438
- Cucumis sativus: CsGy7G021580
- Daucus carota: DCAR_016188
- Glycine max: Glyma.08G201000, Glyma.07G015500
- Gossypium hirsutum: Gohir.A09G081200, Gohir.D09G081300
- Lactuca sativa: gene-LSAT_4X97461, gene-LSAT_1X36740
- Nicotiana attenuata: A4A49_24873
- Prunus persica: PRUPE_1G178600
- Rosa chinensis: RchiOBHm_Chr2g0140531
- Sesamum indicum: SIN_1009546
- Vitis vinifera: VIT_09s0002g03510
Gene Resources
- Pfam: PF03985
- UniProt: A0A251U3K7
- EMBL: CM007898 , MNCJ02000324
- AlphaFoldDB: A0A251U3K7
- OMA: KHEPEQD
- InterPro: IPR007133
- PANTHER: PTHR23188 , PTHR23188:SF12
- OrthoDB: A0A251U3K7
- STRING: 4232.A0A251U3K7
Sequences
CDS Sequence
- >HanXRQChr09g0276241
ATGGCGTCGTACCGTCCGTTCCCTCCGCCGCCACCTCATCCGTCCGGTCCACCACCGCCACCACCAGGAGGAAATATGTATACCCAGATATGGAATTATCCAAATTACACACCTCCACCTATAAACCCTAATTTAAACCACCAACAACAGTTTTTATCATATCCACCACCACAACCACTACAGCCACCACAACAACCACCACCACCAGCAGGACAAATGTACTTTCCACCTTCACAGTACCCTCAGTTCAATAAGCAGTCTCTGCAGCAACCACCGCCTCCGCCTCCACCGCCATCTTCGTCTCCTCCGAGTTCGGCAATCCCGCCACCGCCTTCGTCACACCCGCCTTCGCCTCCACCGCCTCCTTCGTCAGTCTCCGCAACTAATGAAATCAAGGAACATAGACAGATTGACCATCAAGATTCATCCAATGACCCGGCAGGATCAAAACGGCACGAACCGTCTTCGCACCAGAAGGTTGATTCTAAACCGCATGTTAAGAAGTTGGCTTCTGCGGTACCTCCGGTTCCGGTGAGAACGGTTAACAGTGTTGAGGTGGAAGAAGAAAGGAGGAGAAAGAAGAGAGAGATGGAGAAACATAGGAGGCAATTGAAGGAATCTCATAATAAAGTTATGGAAAAAACTTCTTCGAGCGTTAAACCACGTGGTTCAATCAGTGGTTCGCATATTGGTGGGAGGAGGGCGGCGCCTTTATTGAGTGGTGAACGGAGTGATAATCGATTGAAAAAGCCAACGACGTTTCTCTGCAAGTTAAAGTTCCGGGATGAGTTGCCAGACACGACCGCTCAACCAAAGCTTCTGTCTTTAAAAAGAGACGAAGATCGAGCTGCTAAATACGCTATCACTTCATTGGAAAAAGTGCACAAGCCTCAGTTATATGTCGAGCCAGATCTCGGAATACCACTTGACCTACTTGATCTTACTGTATACAATGCTTCAAAAGACGAAAGATTGCACGTTGCCCCAGGGGATGAAAAACTGTTGCAAGAAGATTCTTCAGCGACACCTATTAAAAGCAATGGCTTAAAACGAAAGGAACGCCCTACAGATAAAGGCATGTCGTGGTTGGTAAAAACACAATATATATCCTCTCTTAGCACAGAAGCCACGAGGCAGTCTTTAAGTGAAAAACAAGCGAAAGAACTCAGGGAAACACGTGGACTCAACATACTAGACACTTTTAATAGCAGGGAACGAAAAATCCAGGATATTGAGGCGTCATTTGAGGCGTGTAAATCACATCCTGTTCACGCTACTAATAAAAAGCTGCAGCCCGTAGAGATTTTACCATTATTTCCTGATTTTGAACGGTGGGATGAACAATTTGTTGTTGCAACCTTTGACGGTGCTCCGACTGCTGATTCCGAAAGCTATAATAAAATGGACAAGTCTGTTCGTGATGCTCATGAATCTCGGGCGATAATGAAAAGTTTTGTGGCAAGTACTCCGGGTTCAGCTAAACCCGACAAGTTTTTAGCTTATATGGTTCCTTCAGTTGGTGAGTTATCCAAGGATGCGTGTGATGAAAACGAAGATATTTCTTACACTTGGGTTCGCGAGTATCATTGGGATGTTCGTGGTGAGGATGCGGATGACCCTACGAATTACCTCGTGGCATTTGGTGAATTCGAGGCTCGCTACATGCGGCTGCCTACGAAACTCATTTTAAGAAAAAAGAGAGCGAGGGAAGGAAAAACGAGTGATGAGGTGGAGCATTTTCCTGTACCAGCAAGTATAACCGTAAGGCAAAGATCAAAGGTTTCAGTAGAAATGACCGAAACCGAGGAGAGGAATTCAAATTCTAGACACGATGGAGGAATAGATATGGAAGATGAACAACAAAACGACATGCAAGACGGTGACGGTGGTATGGATCAGTTGAGTGGAGCTGAATATGACATGTCTGATTAA
Protein Sequence
- >HanXRQChr09g0276241
MASYRPFPPPPPHPSGPPPPPPGGNMYTQIWNYPNYTPPPINPNLNHQQQFLSYPPPQPLQPPQQPPPPAGQMYFPPSQYPQFNKQSLQQPPPPPPPPSSSPPSSAIPPPPSSHPPSPPPPPSSVSATNEIKEHRQIDHQDSSNDPAGSKRHEPSSHQKVDSKPHVKKLASAVPPVPVRTVNSVEVEEERRRKKREMEKHRRQLKESHNKVMEKTSSSVKPRGSISGSHIGGRRAAPLLSGERSDNRLKKPTTFLCKLKFRDELPDTTAQPKLLSLKRDEDRAAKYAITSLEKVHKPQLYVEPDLGIPLDLLDLTVYNASKDERLHVAPGDEKLLQEDSSATPIKSNGLKRKERPTDKGMSWLVKTQYISSLSTEATRQSLSEKQAKELRETRGLNILDTFNSRERKIQDIEASFEACKSHPVHATNKKLQPVEILPLFPDFERWDEQFVVATFDGAPTADSESYNKMDKSVRDAHESRAIMKSFVASTPGSAKPDKFLAYMVPSVGELSKDACDENEDISYTWVREYHWDVRGEDADDPTNYLVAFGEFEARYMRLPTKLILRKKRAREGKTSDEVEHFPVPASITVRQRSKVSVEMTETEERNSNSRHDGGIDMEDEQQNDMQDGDGGMDQLSGAEYDMSD*