Information report for HanXRQChr09g0266041
Gene Details
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Functional Annotation
- Encodes a protein with a methyl-CpG-binding domain. Has sequence similarity to human MBD proteins. Involved in the modification of the FLC chromatin acetylation state to affect FLC expression. Mutants show an early flowering, and enhanced shoot branching phenotypes.
Homologous
- Brassica napus: BnaC05G0560100ZS, BnaC01G0494500ZS, BnaA01G0420600ZS
- Brassica oleracea: Bo5g155130, Bo1g158920
- Brassica rapa: Bra040518, Bra039117
- Daucus carota: DCAR_007093
- Lactuca sativa: gene-LSAT_4X181301, gene-LSAT_4X6960, gene-LSAT_8X143300, gene-LSAT_4X181201
- Vitis vinifera: VIT_01s0026g00150
Gene Resources
- Pfam: PF05965 PF01429 PF00628 PF15612
- UniProt: A0A251TXT5
- EMBL: CM007898
- AlphaFoldDB: A0A251TXT5
- OMA: ATTICEI
- InterPro: IPR001965 , IPR011011 , IPR019786 , IPR019787 , IPR028942
- PANTHER: PTHR47162 , PTHR47162:SF8
- SUPFAM: SSF57903
- PROSITE: PS01359 , PS50016
- Gene3D: 2.30.30.1150
- CDD: cd15519
- STRING: 4232.A0A251TXT5
Sequences
CDS Sequence
- >HanXRQChr09g0266041
ATGCGAGCTTCTGATATAAAAATAATCATGAAAAAGTGCAGAAGCAAAGGGGACTATTTTAAACACCTGGGGAATAACTTAAAATTTGATGAGATTAAGGATTTTGAATTTGCATCAAGACATCCTCTGGATATTCCGACTGTTGATATAAATGGCACATATGGTGGTTCACTTGAAGCTTTTCTCGAGGATTTTAGGAAGTTGTGGATCAACTTGGGGAAGACTCATGTCAAGACTCCTAATCTGGTTATCTTGGCAGATGAACGTCCAAAGACTTCAAAGTGCAACATGAAAATGAGGTTTATAAAGTCGTCGTATTGCGATCATATTATAATTTTTGTACGATTTCTTCATGGTGGTGCACATCCCTACAAACAGAACCGGAAGCAAGTTGGCACAAATAGCCTGTCAAGGAAGTCTGATCGGTTCAGTGAGCTAGGAGACTGCAAATTAACAGCCTTGACCAAATCGAGCAAAAATCAGAACATGGAGATCATCAAAGAGAGTGTGTTCGATACGCAATCATTCCCTCAAGGAGCTTTACTTAGCTCAACGTTGTCTTCTCATGCAGTAGGCACCCTTCTTGAGGTGCATGATTTCCTCTGCTGTTTCAAAGAAGTTATCGGATTGGACGAGCAAATTACATTCGAAAAGCTTGAACAAGAGCTTCTACGTCCTTATCCATACGGGGTTGGAAAATCCTCGATCCTGTGTTCGTTTGAAACATTTATTCACAGTAAACTGCTTCCGGAGCTAGTAAGTAAGCTTCTAGATAGATTAGCTTCAGTTTTAAACTCAAAATTAGGAGTAAAAACCGAATTCAATATGCTTCCGATTAACGAGTTGACTTGGCCGGAAGTCGTTCGGAGATATATAATGGCTTACTTGCTAACTGGAGACAGACTCGGTTCTGTAAAGATTACGGATGGCAATATGATTGAACTCATTCACTGTCTGCAAAGTGATTGTAGTGTCTTTTGTAGCTCACCCACAAACGTTGCAGGCGTTGATTTGGATGCTCAGTTGCTTGGAAAAGCTGTAAATAATGTATTTGGTAAACTGAGAAGTGTAAGGAGCACTTTATCGATGGGCGTAAAGGGGGAAGATTCGGATGGTAGTATTCCACAGTGGGCGAAAGTGCTTGATCCTGTTCACAAGCTGGCCACAAACGTTGGATCGCGCATTAGAAACTGCGTGTACGAGGCGTTAAATCAAAATCCACCTGAATGGGCAAGGATGCAACTGGAAGCCTCCATCGCGAAAGGCTTTTACAAGGGCAATGCGTGTGGGCCCACTAAGAGGGCTATACTTGAGGTTTTAAAACGAGCAACATCTGATGTTCCACAGAGGCCGTTATCACTTGACGTGAACGCAACAAGAAGTTCATGTGAGCTTCTGATGTCAAAAGTTATTATGACAAAGTGCAGAAGTATACTACGCAATGTAGCTGCTACATATGATAACGAAATGGACTTTTCTATCCTCGTTAGGAGCAGCTTAAAATCCGACGAGATCAAGGTTGTCTTTGAATCTGCATCAAGGCGTCCTCTGGATCTTCCGATGATCGATTTAAGATTGCTCCACGACACATATTGTGGTTCACCACAAGCTTTTCTTGAGGATGTTAGTGAGTTGTGGATCAACTTAAAGAAGAGCCACATGAATACACCTCGTCTGGTTAAGCTGGTAGACGATATGTCCACGGACTTTACTTTAAAATATGAAAATGAGGTATCCCCTCTGTTGAGCAAGTTGTCCGGATATAGCATGAACGGAGAGTTAAACGCCGAGGTAGAGAAGGAGCTAGAAGAGCTCTTAGCTTCTATCGAAATCCCGGCAATGTCCTTGGAAGCAGGAGTCTGCAAAGTATGTGGCGTTAACCAAGACGATGATAAGGTGTTGCTGTGTGACACTGAATGGTGTAATGCAGAGTATCACATGTACTGTCTGAATCCCGCTCTTTCCGAAATTCCACAAGGCACATGGTATTGTCCTGCTTGTAAGCAGCTGGCAGACGATCAACCAAAAGGCATTCGGATCTCACAATCTGTAGATAAAAGCTTTTTCGAGGAAGCAAGTCTGTTTTTGGATATAGTGACTGCTTTGGAGGAAACAGAGTATTGGCAATTAGAGGCACAGAAGAAAATATTCTTGCTCAAGTTTCTAGTCGACAGGTCGTTAGAAACCAGCCTTATTCGTATGAATCTTGCTGAATTGCAAACAAAGCTAGCCAAGAAGTTTTTGGGCGTTGACTCTGTTGGGCGAATATACTGGGGCTTTCCCTATGTAAGCACAAATAGCGGGATAGTGATAAACGGGGCGATGAACACTGAAATAGATCCGTTTGACCATCGAACAAGTCATTCCGAATACAACAATTTTGGTCAATGGTATTTGTTTCAGTCTGACGAAGAAATCAGCAAACTTGTTGGCTATCTGTCAGTAACTGATCCGTGCAATACTGAATTACGAGATTCTATATTGCTCTGGCAAAACACAATGTTACAAAATGGTCAACACACTGGAGGGAGTAAGTCAATGGGGGGAGAGACGGTTTGTTCTACAAGCTTGAACAATCTTCCTTCTCGTAATTGTCTTGCTACAAATGCGACCATGTTGATTGAGGCCCAATATGGTTCTTGTAAGGAGTCAGATGCAACCAACTCTGCAAAGAAGTCGAGAGGAAAGAACATGGTGAAATGGCACAGGTGTAATTGTCTGGAACCCGTTTTTCCATCTCGATACCATTGTGTCAACTGCCATGAAACGTTCTTCACGAGTGTTGAATTTGAACACCACAAGAACTCTACTTGTGAAATCAAATGTGAGGTTGGTAGCAGTTTTACTGTCCCCGAGTCATCGTCAAAGCCGCTGTTGGGGAATACTCATATACTAAGGCGGCTGATGATGAATTTGTTGGATATCGAAGCTGCGTTACCTGATGGAGCAAGAAGAAGTTCGATGGAAAGCCCCAAATGGAGGTCTGCGTGGTGTGCATTTGTTAAATCTGCTACAACAATATGCGAGATTGTTGAAGCAACTTTAGCGCTGGAAACCATGATCAAGACCGAGTATATCAACAACACTTGGTGGTGGTATTGGTCTTCTATTTCGGGTGCTGCAAAAACATCCACCACCGCTGCCCTTGCTCTTCGTGTCCACACACTTGATGCTGCTATACGATACCTGAAAAACGCATGA
Protein Sequence
- >HanXRQChr09g0266041
MRASDIKIIMKKCRSKGDYFKHLGNNLKFDEIKDFEFASRHPLDIPTVDINGTYGGSLEAFLEDFRKLWINLGKTHVKTPNLVILADERPKTSKCNMKMRFIKSSYCDHIIIFVRFLHGGAHPYKQNRKQVGTNSLSRKSDRFSELGDCKLTALTKSSKNQNMEIIKESVFDTQSFPQGALLSSTLSSHAVGTLLEVHDFLCCFKEVIGLDEQITFEKLEQELLRPYPYGVGKSSILCSFETFIHSKLLPELVSKLLDRLASVLNSKLGVKTEFNMLPINELTWPEVVRRYIMAYLLTGDRLGSVKITDGNMIELIHCLQSDCSVFCSSPTNVAGVDLDAQLLGKAVNNVFGKLRSVRSTLSMGVKGEDSDGSIPQWAKVLDPVHKLATNVGSRIRNCVYEALNQNPPEWARMQLEASIAKGFYKGNACGPTKRAILEVLKRATSDVPQRPLSLDVNATRSSCELLMSKVIMTKCRSILRNVAATYDNEMDFSILVRSSLKSDEIKVVFESASRRPLDLPMIDLRLLHDTYCGSPQAFLEDVSELWINLKKSHMNTPRLVKLVDDMSTDFTLKYENEVSPLLSKLSGYSMNGELNAEVEKELEELLASIEIPAMSLEAGVCKVCGVNQDDDKVLLCDTEWCNAEYHMYCLNPALSEIPQGTWYCPACKQLADDQPKGIRISQSVDKSFFEEASLFLDIVTALEETEYWQLEAQKKIFLLKFLVDRSLETSLIRMNLAELQTKLAKKFLGVDSVGRIYWGFPYVSTNSGIVINGAMNTEIDPFDHRTSHSEYNNFGQWYLFQSDEEISKLVGYLSVTDPCNTELRDSILLWQNTMLQNGQHTGGSKSMGGETVCSTSLNNLPSRNCLATNATMLIEAQYGSCKESDATNSAKKSRGKNMVKWHRCNCLEPVFPSRYHCVNCHETFFTSVEFEHHKNSTCEIKCEVGSSFTVPESSSKPLLGNTHILRRLMMNLLDIEAALPDGARRSSMESPKWRSAWCAFVKSATTICEIVEATLALETMIKTEYINNTWWWYWSSISGAAKTSTTAALALRVHTLDAAIRYLKNA*