Information report for HanXRQChr09g0264401
Gene Details
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Functional Annotation
- Encodes a transcriptional repressor that performs overlapping functions with LHY in a regulatory feedback loop that is closely associated with the circadian oscillator of Arabidopsis. Binds to the evening element in the promoter of TOC1 and represses TOC1 transcription. CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis.
Homologous
- Actinidia chinensis: CEY00_Acc24169, CEY00_Acc15932
- Artemisia annua: Aan015630
- Gossypium arboreum: Cotton_A_26408_BGI-A2_v1.0
- Gossypium hirsutum: Gh_D12G1185, Gohir.D12G121100
- Populus trichocarpa: Potri.014G106800.6
- Vitis vinifera: VIT_15s0048g02410
- Ziziphus jujuba: XP_015888949.1
Gene Resources
- Pfam: PF00249
- UniProt: A0A251TYD1
- EMBL: CM007898
- AlphaFoldDB: A0A251TYD1
- OMA: NVNTQFH
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017884 , IPR017930
- PANTHER: PTHR12802 , PTHR12802:SF177
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS51293 , PS51294
- Gene3D: 1.10.10.60
- OrthoDB: A0A251TYD1
- CDD: cd00167
- STRING: 4232.A0A251TYD1
Sequences
CDS Sequence
- >HanXRQChr09g0264401
ATGGAGTCCTCATCTGGCTATGGGGAAAATCAAAACATCAAGACAAGAAAACCCTATACAATAACGAAACAACGGGAAAAATGGACAGAGGAGGAGCATAACAGTTTTCTAGAAGCCCTGAAATTATACGGGCGAGCTTGGCAACGGATAGAAGAACACATAGGAACTAAGACAGCAGTGCAAATCAGAAGTCATGCCCAAAAATTCTTTACAAAGTTGGAAAAGGAGGCTGTTGCGAAAGGAGTTCCAGTAAGCCAAGCTCTTGACATGGAAATTCCGCCTCCACGCCCTAAAAGGAAACCTAATTATCCTTATCCTAGAAAAACTCAAACACAGGTGCCAGAAAAAGATGAAAAACAAGCAACTTTAGTTTCTTCATTACAAGTAATGGACCTCGAGAGAAAACCCCTGCCTGAGAAAACCAGCCACAGAGAGAAACTAGAAAATGCGAAAACAAGTGAGGAAGCTCAAAATGGTACTACTAAAGACCCTCAAGAAGTTCCATATGCATCCTTGTCCTCAGAAAATGAAAATTCCATACCAAGATCAAATCCTGACGTTTTTAGACGCGATGTAACAAATGCATCATACATCACCATTGAAGCCAGAAAGCATCAAGAATTGGATCAAGATGGAATTAAGCACACAAATATTACATCTAACATCTCACTATTTGAGCCCTCACACCCTGTGCATGATATAAACGGTATTCAGACGACCTACCCAAGGCATGTTCCTGTACAAGTTGTAGATGCAAGTCAAGAAAATACTACTGCAAAAACTAGTGTTGTTCCCCCAGGTACGTCACTTAACGAATCAAAAGTTAATAACTCAGGAGAAGCTTATGAACGCCCCAACCCTAACGTAGCAACAGCATCTGCAACTAGTGGCCATCGTAACAATGCTACCTTCCATCCTCTTTCCAACCCTTTTACTGATAATCAAGAAAGTTACACACCGGTTCTCCATGTTTCATCTTCAATCTCTAGTCTCATTCTTTCATCTTTGCTACAAAATCCTGCAGCACATGCAGCAGCAACCTTTGCAGCTAAATTCTGGCATCCTGTCAATACAGAAGCTTCCTCTGCAGATTCTTTTTCACGAGATCCGTCGAACCCGAACCCTGAGTCCACTACTCCTCCTAGCATGGCCGCCATTGCCGCTGCTACCGTAGCAGCTGCAACAGCATGGTGGTCGGCTCTTGGTTTGCTTCCTGTTTGTACTCCTTCTCACCAAGGGGGGTATTCTTGTACATTTGAGGCAGCACCAATTGACGGGAATAATCTAGTCAATAGTAGGGTTCCTTCAGAAGGTGTCTTGCAGGAAGAGAAGATGGATGATGCCGAAAAGACTGAATCTTCATCAGAGGACTCTGAGAAAAAACTTAACACTGAAGTAATTATTCCTGTTGATACCAATGAAACGGCTCCTGTTGATGATTCAAGCAAGTTGACTAATGTTAAAAAACAAGTTGATCGGTCATCTTCTGGTTCTAACACCATTTCCAGCAGTGAAATTGAAACCGATGCTTTAGAGAAGCATGTGAAAGAAATGGAAGAGAATAAAGGGTTGGATGTGAAGGAGTCGAACTTGCGTAGGGGTAGAAGCACTATTACCCCAAGTGAATCATGGAAGGAGGTTTCTGAAGAGGGACGGCTTGCGTTTCAAGCCCTCTTTTCGAGAGAAGTGCTGCCACAAAGCTTCTCTGATATGGCCGGAAAAGATCATCAACAGAATATAATAGTAAAAAACAGTGAATTGGACCTAAACAGAATGAGTCAAGAACCTTGGGAGAGTAACGGCAACAGTAATGGTTTTGCGGTGTTGAGAAGTGAGGAAGGTGTACTGAGAATGGGATTGGGGAGTGTGAAGCTGAATGTTCATCATACAGGGTTTAAACCATACAAGAGGTGCTCGGTTGAGGCTAAAGAAAACGGCAAGATTATGAGTGCGACATCTACAGGTGGCGCTCAGAATGATGAGAAAGGTCCAAAGAGAATGTGTTTTGAAACAGAAGCATCAACTTAA
Protein Sequence
- >HanXRQChr09g0264401
MESSSGYGENQNIKTRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAVAKGVPVSQALDMEIPPPRPKRKPNYPYPRKTQTQVPEKDEKQATLVSSLQVMDLERKPLPEKTSHREKLENAKTSEEAQNGTTKDPQEVPYASLSSENENSIPRSNPDVFRRDVTNASYITIEARKHQELDQDGIKHTNITSNISLFEPSHPVHDINGIQTTYPRHVPVQVVDASQENTTAKTSVVPPGTSLNESKVNNSGEAYERPNPNVATASATSGHRNNATFHPLSNPFTDNQESYTPVLHVSSSISSLILSSLLQNPAAHAAATFAAKFWHPVNTEASSADSFSRDPSNPNPESTTPPSMAAIAAATVAAATAWWSALGLLPVCTPSHQGGYSCTFEAAPIDGNNLVNSRVPSEGVLQEEKMDDAEKTESSSEDSEKKLNTEVIIPVDTNETAPVDDSSKLTNVKKQVDRSSSGSNTISSSEIETDALEKHVKEMEENKGLDVKESNLRRGRSTITPSESWKEVSEEGRLAFQALFSREVLPQSFSDMAGKDHQQNIIVKNSELDLNRMSQEPWESNGNSNGFAVLRSEEGVLRMGLGSVKLNVHHTGFKPYKRCSVEAKENGKIMSATSTGGAQNDEKGPKRMCFETEAST*