Information report for HanXRQChr09g0251421
Gene Details
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Functional Annotation
- Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation.
Homologous
- Citrullus lanatus: Cla97C07G132430
- Gossypium hirsutum: Gohir.A05G316300, Gohir.D04G066700, Gohir.D10G243500, Gohir.A10G229500
- Juglans regia: Jr12_24030
- Lactuca sativa: gene-LSAT_9X61461, gene-LSAT_8X12401, gene-LSAT_2X122000
- Manihot esculenta: MANES_07G125200, MANES_10G017900
- Prunus avium: Pav_sc0002574.1_g060.1.mk
- Prunus persica: PRUPE_2G246000
- Rosa chinensis: RchiOBHm_Chr1g0369351
- Vitis vinifera: VIT_13s0019g03380
Gene Resources
- Pfam: PF18511 PF18791
- UniProt: A0A251TTZ4
- EMBL: CM007898
- AlphaFoldDB: A0A251TTZ4
- InterPro: IPR001878 , IPR025724 , IPR032675 , IPR036875
- PANTHER: PTHR47481 , PTHR47481:SF3
- SUPFAM: SSF52047 , SSF57756
- PROSITE: PS50158
- Gene3D: 3.80.10.10
- STRING: 4232.A0A251TTZ4
Sequences
CDS Sequence
- >HanXRQChr09g0251421
ATGGCTTCTTCTTCCTCCTCTCCCACTGAATTCAACAACACCTCCCTTCAAACCATCCTTCATCTCATCACCATTAAACTCTCATCCACCAACTATCTTCCATGGAAAAACCAAATCCATCCCGTGCTTGCCTTTCTAAATCTCCTCAAGCACATTGACGGTACCCCGTCACCTCCCGAAACCATCACCTCCGATGGAAAATCGGCTCCAAACCCTGAGTTTCGTTTGTGGAAAGACAACGACCAGAAGCTTATTCTTCTGATTCAATCAACTTTAACCGAAGAAGCCATGTCCGAGGTCATCGGGCATACCTCGGCTCATCAAGTTTGGCATGCTCTTGAACATGCTTACAGTCACTGCTCGGTTGAGCGAATGCACACCCTCCGCGATTCCCTTCGCCAACTCAAAAAGGGAACATCTTCCGTTTCCGATTTTGGCAAAAAATTCAAGTCCCTTTGCGACCAACTTGCTGCTATTGGGCATCCCGTTTCCGACGAGGATAAACGCCATTGGTTCCTTTGTGGTCTTGGCTCCACCTTTGAAACCTTCTCTACGTCACTTCGAATGATCCGTCCAGCTCCACAGTTTCGTGATGTCCTTGCCCAAGCCGAGAACCATGAAATCTTCATGGCAACTTTAAACATTCAACCTCCACCACAAGCTGCCTTCTCGGCCCAAACCGGCAGATCCTTACACCATACTAAACCCTCCCGCGGTGCCTCCTCCGGTCGCTATCGCGGCTCATCTTCCGGTCGTACCCGAAACTTCAATAATAGGAGACCGCCCCATTGTCAATTATGCAGGAAGGAGGGCCACTTTGCCTCTTCATGTCCCAGCCTTGCAAGCTATGCTCAACATGCTACTCCGCTAGATGCAAATCTAGCCCAAGCCTTCCATGCTCAGTGTGGTATTACCCCGGATTGGACAGCCGATTCTGGTGCTACCGCCCACATGCTTCGCTCTACCGATGGTCTTGATGAGTCACACACCGACACGGCAGCGGTTCTCGCTAGAGGAACTTGTGAAAACGGATACTATGTCCTCTCCCACGGTCACAAGTCTCTCGTTGCTGCTCTTGCTGCCCCTCATCTTCGTGCGTCTTTTGATAAATGGCATAACCGTTTAGGTCATGTCTCCTTTGATGTTATTTCAAGTTTGAATAAATGTGGACATGTTTTTGTTACTTCCTTGTTACCCAAACCGGGTTTATGTTCGTCTTGTGAACTTTCAAAAGCACATCGCTTACCTTTTGTTGAGAATAATAAACGTTCCACACGTAAAAGCATCCTAGACTTTGTCATGCTTGCTCGTGTCCGAGGGCATGTTCTTCAGGTTCTTAAGCTTGATAAGTGCTCCGGCTTTTCGACCGATGGCCTGTTGCATATATGTCGTTCCTGCAGGAATCTCAATACCTTGTTTCTAGAAGAGAGCCAAGTAAGAGAGAAAGATGGAGAGTGGCTACATGAACTTGCATTAAACAATACTGTTCTTGAAACATTAAACTTTTACATGACCGATCTTTCGCAAGTTGATTTCAAAGATCTTGAACTTCTAGCCAGAAAATGCAAGACTTTAGTTTCGGTCAAAATAAGCGATTGTGAAATCTTGGATCTTGTTGGTTTTTTTCAAGCTGCCGTTTCATTAGAAGAATTTAGTGGTGGTTGTTTTAATGATCAAGGGGAAGATTATGGTGCGGTTTCTTATCCGTCAAGTTTATGTCGATTGGGTCTGAATTACATGAGCACAAATGAGATGCCGATTGTAATTCCATTTGCTTCGCGGCTCAAAAAGTTGGATCTTCTTTATGCCCTGCTTGACACTGAGGATCACTGTCTCTTGCTCTCAAAGTGCCCCAATTTGGAAGTTCTTGATACCAGAAACGTAATTGGGGATCGGGGAATGGAAGTTCTTGCTCAATGTTGCAAGAAACTAAAGCGGCTTAGAATCGAGCGAGGCGATGATGAACAAGAAATGGAAGATGAAGAAGGCATTGTTTCTCAAATAGGCCTAACCGCGATATCACAAGGCTGTCAAGACTTGCAATACATTGCTGTATATGTATCCGATATCACAAATGCAGCTCTTGAATCTATGGGCATGCACTTAAAAAACCTGAGTGATTTTCGTTTGGTTTTGCTAGATAGAGAGGAGGTTATTACAGATTTACCCCTTGACAACGGAGTCCGAGCTCTACTACATGGATGCCAAAAGCTTAAAAGATTTGCCCTCTATCTTCGACCCGGTGGGTTGACTGATTTGGGTTTGACTTATATCGGTCAAAATAGTCAAAATATAAGATGGATGTTGTTAGGTTATCTTGGAGAATCTGATGAAGGGCTATTAGGGTTTTCAAAAGGGTGTCCTAGTTTACAAAAACTTGAAGTTAGAGGATGTTGTTTTAGTGAACAAGCATTGGCTATTGCTGTTTTACAGTTAAGGTCTTTAAGATATCTATGGGTACAAGGGTATCGCGGGTCTTCAAACGGATATGATCTTTTAACAATGGCCCGCCCGTTTTGGAATATCGAGATAATTCCTTCTAGAAGAGTTCTTGTTGGAGAAGATAAAGAGGTTGAGCATCCTTCACATATACTTGCATATTACTCTCTTGCAGGACCAAGAACAGATTTCCCACCTTCGGTTATATCATTGAATTCGGTTCCTTTTCTTGACGAATAA
Protein Sequence
- >HanXRQChr09g0251421
MASSSSSPTEFNNTSLQTILHLITIKLSSTNYLPWKNQIHPVLAFLNLLKHIDGTPSPPETITSDGKSAPNPEFRLWKDNDQKLILLIQSTLTEEAMSEVIGHTSAHQVWHALEHAYSHCSVERMHTLRDSLRQLKKGTSSVSDFGKKFKSLCDQLAAIGHPVSDEDKRHWFLCGLGSTFETFSTSLRMIRPAPQFRDVLAQAENHEIFMATLNIQPPPQAAFSAQTGRSLHHTKPSRGASSGRYRGSSSGRTRNFNNRRPPHCQLCRKEGHFASSCPSLASYAQHATPLDANLAQAFHAQCGITPDWTADSGATAHMLRSTDGLDESHTDTAAVLARGTCENGYYVLSHGHKSLVAALAAPHLRASFDKWHNRLGHVSFDVISSLNKCGHVFVTSLLPKPGLCSSCELSKAHRLPFVENNKRSTRKSILDFVMLARVRGHVLQVLKLDKCSGFSTDGLLHICRSCRNLNTLFLEESQVREKDGEWLHELALNNTVLETLNFYMTDLSQVDFKDLELLARKCKTLVSVKISDCEILDLVGFFQAAVSLEEFSGGCFNDQGEDYGAVSYPSSLCRLGLNYMSTNEMPIVIPFASRLKKLDLLYALLDTEDHCLLLSKCPNLEVLDTRNVIGDRGMEVLAQCCKKLKRLRIERGDDEQEMEDEEGIVSQIGLTAISQGCQDLQYIAVYVSDITNAALESMGMHLKNLSDFRLVLLDREEVITDLPLDNGVRALLHGCQKLKRFALYLRPGGLTDLGLTYIGQNSQNIRWMLLGYLGESDEGLLGFSKGCPSLQKLEVRGCCFSEQALAIAVLQLRSLRYLWVQGYRGSSNGYDLLTMARPFWNIEIIPSRRVLVGEDKEVEHPSHILAYYSLAGPRTDFPPSVISLNSVPFLDE*