Information report for HanXRQChr09g0249471
Gene Details
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Functional Annotation
- Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells.
Homologous
- Actinidia chinensis: CEY00_Acc30068
- Capsicum annuum: T459_28656
- Citrullus lanatus: Cla97C02G048110
- Cucumis sativus: CsGy6G012460
- Daucus carota: DCAR_012181
- Gossypium hirsutum: Gohir.A05G082500
- Juglans regia: Jr14_17170
- Lactuca sativa: gene-LSAT_6X39380, gene-LSAT_6X39840
- Manihot esculenta: MANES_04G006100
- Medicago truncatula: Medtr4g054980
- Nicotiana attenuata: A4A49_19906
- Populus trichocarpa: POPTR_004G185700v3
- Sesamum indicum: SIN_1015059
- Solanum lycopersicum: Solyc11g067140.2
Gene Resources
- Pfam: PF00136 PF03104 PF08490
- UniProt: A0A251TTH4
- EMBL: CM007898
- AlphaFoldDB: A0A251TTH4
- OMA: EREECSI
- InterPro: IPR013697 , IPR023211 , IPR029703 , IPR042087 , IPR043502 , IPR055191
- PANTHER: PTHR10670 , PTHR10670:SF0
- SUPFAM: SSF56672
- Gene3D: 1.10.132.60 , 3.90.1600.10
- CDD: cd05535
- STRING: 4232.A0A251TTH4
Sequences
CDS Sequence
- >HanXRQChr09g0249471
ATGCTTCTCATGGTCCAGGCATACAAGGCAAATGTCGTATGTCCTAATAAGCACCAAGCTGAACCGGAAAAGTTTTATAATAATCGTCTTCTTGAGAGTGAGACGTACATTGGTGGCCATGTGGAGTGCCTTGAAACTGGTGTTTTCAGATCTGACCTTCTAACTAGTTTTAAACTCGATCCATCTGCTTTCAACCAACTTATTGAAAACCTTGATCGTGACCTTAAATATGCTATTAATGTGGAGGGAAAGATGGAGCTTGAAGACGGTTCAAACTACGATGAAGTAAAAAATGCCATCATGGAAAAGCTTATCGCGTTACGAGATGAACCTACACGAGAAGAATACCCCCTTATCTATCATCTAGATGTTGCTGCAATGTATCCCAACATTATTTTGACAAACAGACTTCAGCCACCATCAGTAGTTACCAATGAGGTTTGCACTGCGTGTGATTTCAACCGTCCGGGTAAAACTTGTCTTAGGAATCTTGAATGGGAGTGGCGTGGAGAAACATACACAGCAAAGAGAAGTGATTACTATCATATTAAGAGGCAAATTGAATCTGAGTTTGTTGATGGGCTTCCACCAAAACCATTCGTAGATCTGCCGAAAGTGGACCAACAGTTGAAGCTGAAAGAACGTCTAAAGAAATACTGTCAAAAGGCCTATAAGCGAGTGCTTGAGAAGCCCGTCACTGAAACTCGAAAAGCAGGCATATGCATGCGCGAAAACCCGTTTTATGTTGATACTGTTCGAAGGTTGTCGGAAGCAAAAGCTAGCGGAAATCCGATAAAGATCCAAGAAGCACAAGATATGGTGGTTCTATATGATTCACTACAACTCGCTCACAAATGTATTCTGAATTCTTTCTACGGATATGTCATGCGCAAAGGTGCAAGATGGTATTCAATGGAAATGGCAGGAGTTGTTACATATACCGGAGCAAAAATAATCCAGAATGCGCATTCACTCATTAAAAAGATCGGAAGACCGTTGGAACTAGACACAGATGGTATATGGTGTGCTTTGCCAGGGTCATTCCCTGAGAATTTCACCTTTAGAGACCCAAAGAAGAAGCTAACAATCTCATATCCATGTGTTATGCTCAATGCTGATGTGTTTGAAAACAACAAAAATAAACAATATCAGACTCTCGTAGATCCTATCAACCGAACATACACAGAACGTGAGGAATGCTCGATTGAATTTGAAGTGGACGGGCCATACAAGGCTATGATTCTTCCTGCTTCTAAAGAAGAAGGAATATTGTTAAAGAAGCGATATGCTGTGTTTAATGAAGACGGTACCCTTGCCGAGCTTAAAGGTTTTGAGATAAAGAGGCGGGGTGAACTAAAGCACATTAAAGTTTTCCAAGCCGAGCTCTTTGAGAAATTTCTTCACGGGTCTACCTTAGAGGAATGCTATTCTGTAGTTGCTTCTGTTGCAAATCGTTGGCTTGATCTTCTTGATAATCAAGGGAAGGATATTGCAGACAGTGAATTGCTTGATTACATATCAGAATCGAGCACTATGAGCAAGTCTTTAGCTGATTATGGTGAACAGAAATCATGTGCAGTAACCACAGCAAGGCGTCTTGCTGATTTTCTTGGTGATACTATGGTTAAAGATAAAGGCTTACGTTGCCAATATGTTGTTGCACGTGAACCACGGGGTAACCCGGTGAGCGAACGCGCTGTTCCTGTTGCTATATTTGAAACCGATGCAGAGCTTATGAAGTTCTATTTGAAAAAGTGGTGCAAAATCTCATTAGACTTTGATATTCGATCTATTATTGACTGGTCATATTACAAACAACGGCTTAGCTCTGCTATACAGAAAATCATTACCATTCCTGCAGCAATGCAAAAGGTTTCAAACCCTGTTCCAAGAGTAGTTCATCCTGATTGGTTGTACAAGAAGGTTCGTGAAAAAGATGACAAAATGACGCAAAGAAAACTAGTTGATTTTTTTAGTTCAGTGAACAAGATAAATAAAGATGACCCGAAAAATGATGCAATCGGAGAAAATCATGACCCGGATGAACAAAACGTTGCGGATATGGAGGATTTCGGAAGCAATGGAAAATCTTCTGGTGTTGGACCTAGACCTATTGCCCGTTCATACGAAACTAAACGTAAGTCAAGTGGTGAAGGAGATTCATTTAAGAAAAAAATAGATAGTGATCATAGTGGGAATCTGCCGGCATCATCAGCACAAGCCATCGATGTTGATATCGAAGATATAGACAGACACTTGGATTACCAAGGATGGCTTGATTCAAAAAAAAAGAAAGTGGAAACAAGTTCGTTGGGCACTTTGGATGAATCTAATCAAAGAAATGGAGCTATTGGTATCCCTAGTGGTGTGGCAAATACAAGACGGGCTCAGGGAACTGGGGTCGGTTCAGTTTTTACAAGGCAGGAACTAGCCCTTATAGACAGCCACTGGCAGATAATTCAACTTGTTCCAAGTTCACAAAATGGACAATTTTTTGCATGGGTTGTTGTGGATGGAACCATGCATAAAGTTCTTATCAATGTTCCCAGAGTATTTTACCTAAATTCCAAAGCTCCAGTGACCGAAGAGTTTCCCGGAAGACTAGTGAACAAGATTCTTCCTCATGGCCACAATCCCTATAACTTAATTGAGGTAGTAATTGATGAAGATCAATTTAGGACAGAAAGCAGGAAACTTGCTGCTCACCTTGCAGATCCTGAAGTGGAGGGGATATATGAAACAAAAGTAGGGCTGGATTTCAACTTCATTCTTCAGATAGGATGTGTTTGTAAAGTTGGTAAATCAGTTAAGAAACGAAATGCACAAGACGGATGGAGTTTAAGTGAGTTGCATATGAAAACCACTACCGAGTGCTCTTATTTAGCATCGTCCATTTCTTTCTTTTACTTATATCATAGCATATCTGATCAACGGGGTATTTATCTTGTATATTTTCCTTCACGGTCAACCATCCATGCGGTGATGGTCACCCCTGTCCAGAATAAAGAGTTATCACCACATATTTTAGAGAAACAGTTCCGTGAAGCCTGCCACGCTTTATCAGTTAAACCTCCCGTGCCTAGATATGCTTTCACTTTTAAGGTATTGTTATGCGTGGACTATGTCGGAATCGCTAAGGATGCTCAGAAAGTCTTACAGAGAGCAATTAGTGAATTCAGATCTCAGCTTCACGGGCCTGCAATTGCTGTAGTTGAGTGCCCAAATGTTGCTTCAGTGAAGTCCGGCATACGGGCTCTTGATGATTTCCCGTGTGTGAACATTCATTCAAATGCACGTGATAGTCAATATCCGGCTCTTGGTTGGCAGATTGTAGCTGCAAAAATTGGGATGCGTCGTTGTGCTACATCATCCCGTTGGTTGAATGAAAAAATTTCTCTCTCCAGATATTCTCATGTTCCAGTAGGCAATATTGAACTAGATTGGCGTATACAAACAGCAGATATCTTCTTTGCAAGAGTGTTGCGTGACCAAAAACAGGTTCTCTATGATTCACTTTTATACAATCTCATTCTTGTCCACCCCTATAGCTCAGTTGGTTGTTGGACCGGGTGTTTCCTTGTGAGACCCCGGTTCGATTCCCGGCAAAGGCAAATGGGTGTGACATGTGCGCTATGA
Protein Sequence
- >HanXRQChr09g0249471
MLLMVQAYKANVVCPNKHQAEPEKFYNNRLLESETYIGGHVECLETGVFRSDLLTSFKLDPSAFNQLIENLDRDLKYAINVEGKMELEDGSNYDEVKNAIMEKLIALRDEPTREEYPLIYHLDVAAMYPNIILTNRLQPPSVVTNEVCTACDFNRPGKTCLRNLEWEWRGETYTAKRSDYYHIKRQIESEFVDGLPPKPFVDLPKVDQQLKLKERLKKYCQKAYKRVLEKPVTETRKAGICMRENPFYVDTVRRLSEAKASGNPIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNAHSLIKKIGRPLELDTDGIWCALPGSFPENFTFRDPKKKLTISYPCVMLNADVFENNKNKQYQTLVDPINRTYTEREECSIEFEVDGPYKAMILPASKEEGILLKKRYAVFNEDGTLAELKGFEIKRRGELKHIKVFQAELFEKFLHGSTLEECYSVVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGDTMVKDKGLRCQYVVAREPRGNPVSERAVPVAIFETDAELMKFYLKKWCKISLDFDIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVREKDDKMTQRKLVDFFSSVNKINKDDPKNDAIGENHDPDEQNVADMEDFGSNGKSSGVGPRPIARSYETKRKSSGEGDSFKKKIDSDHSGNLPASSAQAIDVDIEDIDRHLDYQGWLDSKKKKVETSSLGTLDESNQRNGAIGIPSGVANTRRAQGTGVGSVFTRQELALIDSHWQIIQLVPSSQNGQFFAWVVVDGTMHKVLINVPRVFYLNSKAPVTEEFPGRLVNKILPHGHNPYNLIEVVIDEDQFRTESRKLAAHLADPEVEGIYETKVGLDFNFILQIGCVCKVGKSVKKRNAQDGWSLSELHMKTTTECSYLASSISFFYLYHSISDQRGIYLVYFPSRSTIHAVMVTPVQNKELSPHILEKQFREACHALSVKPPVPRYAFTFKVLLCVDYVGIAKDAQKVLQRAISEFRSQLHGPAIAVVECPNVASVKSGIRALDDFPCVNIHSNARDSQYPALGWQIVAAKIGMRRCATSSRWLNEKISLSRYSHVPVGNIELDWRIQTADIFFARVLRDQKQVLYDSLLYNLILVHPYSSVGCWTGCFLVRPRFDSRQRQMGVTCAL*