Information report for HanXRQChr03g0080251
Gene Details
|
|
Functional Annotation
- Mutant has early-flowering phenotype, encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens.
Homologous
- Actinidia chinensis: CEY00_Acc29548
- Capsicum annuum: T459_10562
- Daucus carota: DCAR_025582
- Gossypium hirsutum: Gohir.A10G069101, Gohir.D10G082300
- Juglans regia: Jr07_32080
- Lactuca sativa: gene-LSAT_1X32000
- Manihot esculenta: MANES_04G104700
- Nicotiana attenuata: A4A49_21629
- Prunus avium: Pav_sc0000663.1_g240.1.mk
- Prunus persica: PRUPE_2G099100
- Solanum lycopersicum: Solyc03g117120.3
- Solanum tuberosum: PGSC0003DMG400014195
Gene Resources
- Pfam: PF04096 PF12110
- UniProt: A0A251V8B6
- EMBL: CM007892 , MNCJ02000317
- AlphaFoldDB: A0A251V8B6
- OMA: RWKFEVD
- InterPro: IPR007230 , IPR021967 , IPR036903 , IPR037665
- PANTHER: PTHR23198 , PTHR23198:SF26
- SUPFAM: SSF82215
- PROSITE: PS51434
- Gene3D: 1.25.40.690 , 3.30.1610.10
- OrthoDB: A0A251V8B6
- STRING: 4232.A0A251V8B6
Sequences
CDS Sequence
- >HanXRQChr03g0080251
ATGGCTGTGTATTTAGACTCCTCAGACTCGTATCATAATCATCTTGTATCTCAGTTTAAGAAAAGAAAAGTAATTTCGGACGGTGATAATGGCTCGTTAGTGTGTTCACTCACGTGTTTACCTACTCTTCAAGCTTCTGATTATTTCATGGAACCTAGTTTGAGTCAGTTGATCACGAGGGAACTCACAGATCCAGGTTACTGTGCTAGGGTTCAAAACTTTACGGTTGGTAGGTACGGATACGGAAACGTTAGGTTTTTTGGGGAAACCGATGTCAGATGGTTAGATTTAGACCAGATTGTTAAGTTCAGAAGGCACGAGATTGTTGTTTATGAAGATGAAACCGTCAAACCGTCGGTTGGTAAGGGGCTTAACAAAGCTGCCGAAGTAACTTTAATACTTCAAAAAGATTCCTCAATTGAGAAGTTGAAATTAAGTGCAGAAAATCAAGGAGCTGAGTTCATTTCTTTTGACACAATCCGAAAAGAATGGAAGTTTTCTGTTCAACATTTTAGCAGATTTGGGTTGAGTGATGATGAGGAGGATGATGTCATGATGGATGATGCTGATGTCGATGTTAGAGAACGAGAACAGGTTACAATGAACGATAACGACGGTTCTGATCTTGATGAAGGCAGCCCGTTAACAGATTCTCGTTTACTTTCTCATTCGCTTCCTTCGCACCTCGGGCTCGATCCTGTTAGAATGAAGGAGATGAGGATGATGATGTTTTCTCCTGAAGAAGAAGAGGATGACGCCGAATTAGATAACTTAAACGGCACGTTTTCACACCATAGACCGTTACACGGTAGCAAAACGGTGCAAAGATCCAGCCCGTTAACAATTCGGAAGACCCCACTAGCTTTACTCGAGTACAATCCTGGTAGTTTTGCTTCAAGCGATAATGGGTCTATTTTACTCTCTCAACAAAACAAAGGGGTTCCTTTGACAATAACAAAAGTTCAAGGGTTTAAACTGGAAATTAAGGAAACACCAGTAACAAAAAGCTATTCGAAGAACATAGTTGATGCTGGATTGTTGATGGGTAGGTCGTTCGGTATAGCATGGGGTCCAAACAACCTTCTTATTCACTGTGGTTCCGTTGGTGACAGTAATAAGAGTCCACATCTTTCTTCTACAATAAGTTTAGAAAAAGTTGCAACCGATAATGTCGTCAGAGATGAAAACAACAAAATACGTGAAGAACTTATTGGTTTATGCTTCGATTCTCCGTTAAGTTACCATAAAGAAATTAATTTTGAAACGAATGAATTCATAGTTGATTCATATAAGTTAAAGGCTCGAAAGCTTGTGTTTAACCGTTTGGATTTATCGCATGTATGCCGCCAATATATTGGGATTATCGAAAAGCAGTTAGAAGTACCAGGATTATCTTCTTCTGCTCGTGTGATGTTAATGCACCAAGTTTTTGTTTGGGAACTTATAAATGTTCTTTTTTCCTCAAAAGAAAGTTCTATAGAAGCTGACGTGGCAGCACTCCCGTTGATTCGAAGAGCAGAGTTCAGTGTTTTGTTACAAGAAAGTGTTTGTCACCGTGTACAAGACGAAATAAGTTCGTTAAACGATTCAAAAGATTTACAACAGTTGTTTTTACTTTTAACTGGCCGGCAAATCGATGCAGCCGTTGAATTGTCGGCATCTAGGGGAGATGTACGACTCGCTTGTCTGTTAACCCAAGCTGGTGGGTCCACCGTTAACCGTATGGACATTGATCGACAACTCGACCTTTGGAAAACCAACAGTCTAGATTTCGGTTTTATTGAGAATGACAGGATAAGGCTTTTCGAGTTGCTTGCAGGTAATATCCACGGGGCATTAGGTGAAATGGATATCGACTGGAAACGGTTTTTAGGATTGCTGATGTGGTATCATCTTCAACCTGCTTCCGATTTGACTTCTATATTTCAAACCTATCAACACCTTCTAGAAGATGGGCGGGCCCCGTATCCGGTTCCTGTCTACATAGATGAAAAACTGGTAATGGATAAAATAAGTTGGAGTCCTGGTAACCGTTTCGATCTTGCGTATTATTTAATGATTCTTCATAGTAACGAAGGGAGAGACGTTACTAATATTCACATGTTGAAGACTATGTTTAGTGCGTTTGCTTCAACTCACGATCCGCTTGATCATCATATGATATGGCATCAGCGTGCAGTGTTGGAAGCGGTTGGAACGTTTAGTTGTGATGATCTTCATGTTCTTGATATGGGATTTGTTTCACAGTTGTTAAACCTAGGACACTGTCATTGGGCTCTCTATGTTGTGCTCCACATGTCACATCGTGATGATTATCCGTATCTGCAAGCTAGTGTCATTCGGGAAATCTTGTTTCAGTATTGTGAAACATGGAGTGCTCAAGAAAACCAACGACAGTTTATTGTGGATTTGGGAGTTCCTTCGGCTTGGTTGCATGAGGCCTTGGCAGTATATCATGCTTATAATGGAAATTCTTTCAAGGCTCTTGAACACTATCTTGGATGTGGTTTTTGGCAAAAAGCACATTCAACCTTCATAACTTCCGTTGCACATTCTCTTTTCATGTCAGGCAAACAATCAGAGATATTGAGGCTGGCAACCTCTATGGAAGACCATAAATCCGAGATCGAAAACTGGGACTTGGGAGCTGGAATTTTTATAACTTTTTATTCACTTAAAAGTTCTTTGAAGGAAGATGATTCGATGACTGAACTGGTGTCTCTCCAGGACAAGAATGACGCATGCAGAAAGTTTTTTAGTCGTTTGAAAGGATCTTTGGCATTTTGGGAAGGCCGCTTGCCTATTGATGCCAGAACGGTGTACGCAAAAATGGCGGAGCAAATAAGTGATCTGCTTGTAGCTGATCCCGGGGAGGGTTCAACCACTGAGGTCAAGTTAGATTGCTTTAACACGATATTTGATTCACCGGTTCCTCAAGATCTTCTTTCATCCCATTTACAGTCCGCAATATCACATTTTACATTGCATCTTACTGAAGCAGCCTCATAA
Protein Sequence
- >HanXRQChr03g0080251
MAVYLDSSDSYHNHLVSQFKKRKVISDGDNGSLVCSLTCLPTLQASDYFMEPSLSQLITRELTDPGYCARVQNFTVGRYGYGNVRFFGETDVRWLDLDQIVKFRRHEIVVYEDETVKPSVGKGLNKAAEVTLILQKDSSIEKLKLSAENQGAEFISFDTIRKEWKFSVQHFSRFGLSDDEEDDVMMDDADVDVREREQVTMNDNDGSDLDEGSPLTDSRLLSHSLPSHLGLDPVRMKEMRMMMFSPEEEEDDAELDNLNGTFSHHRPLHGSKTVQRSSPLTIRKTPLALLEYNPGSFASSDNGSILLSQQNKGVPLTITKVQGFKLEIKETPVTKSYSKNIVDAGLLMGRSFGIAWGPNNLLIHCGSVGDSNKSPHLSSTISLEKVATDNVVRDENNKIREELIGLCFDSPLSYHKEINFETNEFIVDSYKLKARKLVFNRLDLSHVCRQYIGIIEKQLEVPGLSSSARVMLMHQVFVWELINVLFSSKESSIEADVAALPLIRRAEFSVLLQESVCHRVQDEISSLNDSKDLQQLFLLLTGRQIDAAVELSASRGDVRLACLLTQAGGSTVNRMDIDRQLDLWKTNSLDFGFIENDRIRLFELLAGNIHGALGEMDIDWKRFLGLLMWYHLQPASDLTSIFQTYQHLLEDGRAPYPVPVYIDEKLVMDKISWSPGNRFDLAYYLMILHSNEGRDVTNIHMLKTMFSAFASTHDPLDHHMIWHQRAVLEAVGTFSCDDLHVLDMGFVSQLLNLGHCHWALYVVLHMSHRDDYPYLQASVIREILFQYCETWSAQENQRQFIVDLGVPSAWLHEALAVYHAYNGNSFKALEHYLGCGFWQKAHSTFITSVAHSLFMSGKQSEILRLATSMEDHKSEIENWDLGAGIFITFYSLKSSLKEDDSMTELVSLQDKNDACRKFFSRLKGSLAFWEGRLPIDARTVYAKMAEQISDLLVADPGEGSTTEVKLDCFNTIFDSPVPQDLLSSHLQSAISHFTLHLTEAAS*