Information report for GSCOC_T00037893001
Gene Details
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Functional Annotation
- Encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B.
Homologous
- Actinidia chinensis: CEY00_Acc30448
- Beta vulgaris: BVRB_1g008490
- Daucus carota: DCAR_001994
- Gossypium hirsutum: Gohir.A08G079500, Gohir.D08G089100
- Juglans regia: Jr14_21470
- Lactuca sativa: gene-LSAT_6X52501
- Nicotiana attenuata: A4A49_13611
- Populus trichocarpa: POPTR_001G008800v3
- Prunus persica: PRUPE_1G537100
- Rosa chinensis: RchiOBHm_Chr5g0081511
- Sesamum indicum: SIN_1010705
- Vitis vinifera: VIT_06s0004g00950
Gene Resources
- Pfam: PF00097 PF02886 PF12678 PF13639 PF13920 PF13923 PF14447 PF14634 PF14835 PF15227 PF17121 PF18912
- UniProt: A0A068UXF1
- EMBL: HG739157
- AlphaFoldDB: A0A068UXF1
- OMA: YSNIDTR
- InterPro: IPR001841 , IPR013083 , IPR013956 , IPR017907 , IPR018957
- PANTHER: PTHR23163 , PTHR23163:SF8
- SUPFAM: SSF57850
- PROSITE: PS00518 , PS50089
- Gene3D: 3.30.40.10
- OrthoDB: A0A068UXF1
- CDD: cd16499
- STRING: 49390.A0A068UXF1
Sequences
CDS Sequence
- >GSCOC_T00037893001
ATGGAGGATAAGGAGCCCGAAGAACCGCAGAAGAAGCGGCCACGCTCTGACTCTGATAACTCGAAACGGATTGATGCTGCACTTCTCCAGTATCAGAATCAGAGACTTGTTCAGCAATTAGACTTGCAGAAGCAGGAGTTGCTTGATCTGGAAGTCAAAATGAAAGAGCTGAGAGATAAACAAGCTTCTTATGATTCAGTGTTGATTACAATTAATAGACTCTGGAATCAATTAGATGGTGAACTAATCCTTCTGGGAGTACGAGCTGGGGCTGGTAAAACAGCTCTGCACAGTTCTGATCAAGTTGATCGATTACAAGGTCCAATGCCATCATGTCGTGCAGAAGATATTTTTCTTTGCAGGCTACTGCAAACAAATGCAATTGAAAGCACCGGAGGTGATGGAGCTAATGGATATATCAAAGAAGGCCTAGCTCGGCGTCAGGCTTCTACAAGGGCATTGATGAAATTGTTGGAAGATGCTATTGAAGCTCAGAGAGCTAAAATAGAGAACATATCGCAGGCTTTTCATGGAAAATCATCTGCAGAAGATTTTGTGCTCATACTGGGAAAGATTGATGCTTTAATGAAAGAGGAAGTTGATAATCTGCACAAGGTGATGGATATCCTTCATTTGAAGCATAAAGAATATGCTGATGAGATCCAGACCTGTATTGAGAACAACTCAGTTGATCAATCAGAGATAAAGAGACTTAATGGTGAGCTGGAAGAAAGCATGGCAGAACTTGAGGAGAGTAGAAGAAAGCTTGTGAATCTGAGAATGCAGAAAGAGGGGCCTTCTGCAGTACAATCCCCCATATCAGTTGTTGCAAATGGAACTGCGTCTCCTGAAAAACCTGCAGACAGGGCCAAACGTTTACGAGGACTGAAGGATTCGATTGAGGAGACAAAGGTACTTGCAGAGGATCGTCTTGCTGAGGTTCAAGAGATGCAGGAAGACAATCTCAGCTTGTTAAAGCAGTTGCAGGACCTTCAGAATGAACTGAAGGATGATAAATGTGTGTATTCTTCTCGTCCTTACACCTTACTGAATGATCAGCTCCAGCACTTGAATTCTGAAGCCGATCGGTACAAAGTGCTTGCAGAGTCAGTGCAGGCTGAGAGATCTTTGATAATCCGAAGGGAGAAGGAACTTTCTGTAAAAGCAGAATCTGCGGAGGCTGCAAGAAAGGGGGTTGAGAACTTAGAAGCCAAGATTGAGGAGTTAGAGAATCAACTTCATAAGTCGATTGTTGAGAAAAATGAGCTGGAGGTTAAGATGGAAGAAGCTTTGCAGGATACAGGTAGAAAAGATGTTAAAGAAGAGTTTCAGATTATGGCTTCTGCTTTATCAAAGGAAATGGGAATGATGGAAACTCAATTGAATCGGTGGAAGGAGACAGCCGAAGAGTCCCTTTCCTTGCACGAAGAAGTCCAGTCGCTGAAAGCTTTGGTGGACAGTAAGACTACTGAAGAGAAAGACTTGGCTGATAGATGTGCACATCAAATGGGAGTGATCAAGTCTTTGAAGGCATACATTGAGAAGATGCAGAAGGAAAAAGAAGAGCTACAAATATTTGTGGACATGCTTGGTCAGCAAATATATGACAATAGAGATGTGAAGGAAATTAAAGAGTCGGAGCAAAGAGCGCATGCTCAAGCTAAAATTTTGAGAAATACTTTAGATGAACACGGCCTTGAATTGAGAGTGAAGGCTGCTAAGGAAGCTGAGGCAGCTTGTGAGGAAAGGCTTGCCGCTGCTGAAGCCGAGAAAGCTTCTTTGAGGGATGAAGTAGATGCCTGTGACAGGGATGTTTTAAAGCTTCAAGAGGCTATCAAACTAAAAGAAGCTGAGGCAGAAGCATATATTTCTGAAATTGAGACTATTGGTCAAGCATATGAAGATATGCAGATGCAGAACCAGCGTCTCTTACAGCAGGTGACTGAAAGGGATGATTACAATATTAAGCTGGTATCTGAGAGCGTGAACGCAAAGCAGGCACACAATTTGTTATTGTCTGAGAAGCAAGCATTAAGCAAGCAACTTCATCGAGCTAACGCAATGCTGGACTCTCTGAAATTGAGAATTACTCAATGTGAAGAGCAGGTCAAAGTTCATCTGATGGAAGCTTCAAGGTACATAGAAGAAGATAGACAGCTTGCAGCAGACCTAGAAACTTCAAAAAGGGAACTAGTGGATGCTGAGAAGGAAGTTAAATGGCTGAAATCTGCTGTTGCATCATCTGAAAAGGAAAATGAGCAGATTGAACGAAAGAAGGCTGAACTTCTATTGGAATTGGAGAGTGAGAGAGAAGCAAGGAAGAAGATTCAGGAAGAGATTGCCACATGGAACAAATCTATCGATGAGATGACTTCTGAGAACGAGGAAGCTGAAATTCTGAGACTTCAGGACGAAATTAAGGAGTGCAAAGCTATTCTCAAGTGCGGGGTGTGTTTTGATCGTCCTAAGGAGGTTCTTATTGCCAAGTGTTATCATCTATTTTGCAATCCATGCATCCAAAGAAATCTAGAGATCCGCCATCGAAAGTGTCCAGCTTGTGGAATGGCATTTGGGCAAAGCGATGTTAAATTTGTAAAGATTTGA
Protein Sequence
- >GSCOC_T00037893001
MEDKEPEEPQKKRPRSDSDNSKRIDAALLQYQNQRLVQQLDLQKQELLDLEVKMKELRDKQASYDSVLITINRLWNQLDGELILLGVRAGAGKTALHSSDQVDRLQGPMPSCRAEDIFLCRLLQTNAIESTGGDGANGYIKEGLARRQASTRALMKLLEDAIEAQRAKIENISQAFHGKSSAEDFVLILGKIDALMKEEVDNLHKVMDILHLKHKEYADEIQTCIENNSVDQSEIKRLNGELEESMAELEESRRKLVNLRMQKEGPSAVQSPISVVANGTASPEKPADRAKRLRGLKDSIEETKVLAEDRLAEVQEMQEDNLSLLKQLQDLQNELKDDKCVYSSRPYTLLNDQLQHLNSEADRYKVLAESVQAERSLIIRREKELSVKAESAEAARKGVENLEAKIEELENQLHKSIVEKNELEVKMEEALQDTGRKDVKEEFQIMASALSKEMGMMETQLNRWKETAEESLSLHEEVQSLKALVDSKTTEEKDLADRCAHQMGVIKSLKAYIEKMQKEKEELQIFVDMLGQQIYDNRDVKEIKESEQRAHAQAKILRNTLDEHGLELRVKAAKEAEAACEERLAAAEAEKASLRDEVDACDRDVLKLQEAIKLKEAEAEAYISEIETIGQAYEDMQMQNQRLLQQVTERDDYNIKLVSESVNAKQAHNLLLSEKQALSKQLHRANAMLDSLKLRITQCEEQVKVHLMEASRYIEEDRQLAADLETSKRELVDAEKEVKWLKSAVASSEKENEQIERKKAELLLELESEREARKKIQEEIATWNKSIDEMTSENEEAEILRLQDEIKECKAILKCGVCFDRPKEVLIAKCYHLFCNPCIQRNLEIRHRKCPACGMAFGQSDVKFVKI