Information report for GSCOC_T00036370001
Gene Details
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Functional Annotation
- Encodes a nuclear-localized RRP6-like protein whose mutation leads to accumulation of an rRNA maturation by-product.
Homologous
- Actinidia chinensis: CEY00_Acc13302
- Capsicum annuum: T459_05971
- Glycine max: Glyma.05G089300, Glyma.17G187400
- Gossypium hirsutum: Gohir.A11G231400, Gohir.D11G242700
- Juglans regia: Jr03_20720, Jr03_20710, Jr03_20760, Jr03_20730, Jr03_20750, Jr03_20740
- Nicotiana attenuata: A4A49_26245
- Populus trichocarpa: POPTR_013G062800v3, POPTR_019G038700v3
- Prunus persica: PRUPE_7G010800
- Sesamum indicum: SIN_1003534
- Solanum tuberosum: PGSC0003DMG400020924
Gene Resources
- Pfam: PF01612 PF00570
- UniProt: A0A068UYF3
- EMBL: HG739153
- AlphaFoldDB: A0A068UYF3
- OMA: DWLVNIN
- InterPro: IPR002121 , IPR002562 , IPR010997 , IPR012337 , IPR012588 , IPR036397 , IPR044876 , IPR045092 , IPR049559
- PANTHER: PTHR12124 , PTHR12124:SF47
- SUPFAM: SSF47819 , SSF53098
- PROSITE: PS50967
- Gene3D: 1.10.150.80 , 3.30.420.10
- OrthoDB: A0A068UYF3
- CDD: cd06147
- STRING: 49390.A0A068UYF3
Sequences
CDS Sequence
- >GSCOC_T00036370001
ATGGAAGTCGAACCATCCGAGGAAGAATCCTCCAAAACAGTAGCAAATTTATTAAGCGATATAGCGATAAAGGGTCCGTTACCATCATCAGTAGCTAAGTTATCGGGGTCTTCTAGGGGCATTCCTTCGGAGAAAGACTTCCATTTCTACAAAAATTTCAATGAATTCAAGACGCCCATCAAAGAAATCGACGATAAATCGAAAAGCTTGCTGGAGAGAATTGGTGTTTCGTCGCAATTGTGGGGGAAAGCGCTGGAATTTCCGCGGAATTTGGATTTTGATGATATTGATGCGTATGATTGGTTAGTGAACATCAATGATGATGTTTTGGAGAAGCTTGATGCCTCACTCGATGAATTTCGCGTAGGAAGAGGTGAGGAGAGTGGCTTTCAAGTGGTACAGGGGAGGAAGAATAGGAGAGGAGTGGCTAGTGGTAGTGAAGAAGCGGTCAGAGGAGTGCAGGTGGCTGTGAAGCCCAAGCCTAAAGTGCCATTTCATATAGCAACGATTCCGAGGCCTCAGGATGAGTACAAGTTTATTGTGAATAATTCCAATCAGCCCTTTGAGCATGTTTGGTTGCAGAGGAGTGAGGATGGTTCCCGTTTTGTTCATCCTTTGGAGAATCATTCATTCTTGGACTTTGTTGATAGAAGTACCAGCAACGTCACACCTGTAAAACCTCATCCACTAGAGTCTACGCCTTTCATGCTTGTAGAAGATGTCAAAGATTTGAAGAAGTTAGCTGCCAAGTTGAAAGTTGCAGATGAGTTCGCGGTTGATCTGGAACATAATCAGTACCGCTCTTTTCAAGGACTTACATGCCTAATGCAAATATCTACCAGAAGTGAGGATTTTGTGATAGACACGCTTAAGCTTCGCATTCATGTTGGCCCATATTTGAGGGAAGCTTTTAAAGATTCCAACAAGAAAAAGGTGATGCATGGAGCAGATCGGGATATTATATGGCTTCAGCGGGACTTTGGCATATATGTCTGCAACTTGTTTGACACTGGGCAGGCCTCAAGGGTATTGAAATTGGAAAGGAACAGTCTGGAATATTTGTTGCACCATTTCTGTGGAGTTACTGCAAATAAGGAATACCAAAATGCTGATTGGAGACTGCGCCCCCTTCCTCATGAGATGCTCAGATATGCGAGAGAAGATACACACTACCTTCTGTATATCTATGATTTAATGAGAATGAAGCTACTATCAGCATCTAGTGAGACTGAAGATGTCAATCCTCCTCTCGAAGAGGTGTACAAGCGCAGTTACGATGTCTGCATGCAGCTTTATGAGAAGGAGCTTTTGACCGATCGTTCATATCTTCATATCTATGGGTTACAGGGTGCTGATCTTAATGCTCAGCAGCTTGCTGTTGTTGCTGGTCTATGTGAATGGAGGGATGTTGTAGCCCGTGCCGAAGATGAGAGTACTGGCTATGTATTGCCAAACAAAACTCTTATTGAAATTGCCAAACAGATGCCTCTCACGACTAGCAAATTGAAGCGATCATTAAAATCAAAGCATCCATATATCGAGCGGAATCTTGGTTCAGTTTTAAGCATCATTAGGCACTCCATGCAAAATGCAGCTGCATTTGAAGTTGCGGCTCAGCAGCTAAAAGAACAGCATGTGGAAAGAGCAACTGAAAATATTTTAGTTGCTGAAGTAGATGAAGTTTTGCCCTCTGAAGCTCCTGAGATTTTGAAAACTGTTGGAGATGCTGAAGGTGTTACTCTTGGGACTTTATCATCTAACACCATGCTTGGGCATTCAATGGTTTCTGTACAGCAAGAAAACAAGTTGGTCGACCCAGGATGTTCAACTGGAGGTATTACAGCAAATTCACAGGCAATTCACAAGTCTCCTGGTGAAAGTGGAAGCATAAATAGTGCAGCAGATAGTTACACTGCTGCCATCCCAAGGGCAGCAGCCTGCGGTGCATCTGAATCTTCTGGAGAGGCTGGAGCCAGCGTTCAGGTTCTGAAGAAGCCAAGCCGTGGTTTTGGGGCCCTGCTAGGAGGTTCTACAAAAAGAAAGCTCCATCCTGATATAAAGGAAGATCAAAAGCTGGAAGAGATCAAGTCCTCGGTGAACCTTCCATTCCATGCATTTCCAAGCAGTGGTGAGCTGCTGCAGCCAGCTGCACAAGAACGTGCTGCACTAGTGGATACTTTACACAATGGACAACCTGTGTCAAATAGTTCAAACTTGGAAGATTTCATATTGCTGGGAGCTGGATCTGATGTTGAATCAGGAGATAATGGCACTGAAGCTGTGAATGTAGTGGTGGATAATAAGGAGGACAATGCTGTAGGTTCTACCTTGGATATGGAAGAGGAAGAGGGAGAGGGAGAGGATACTATGTCTCTATCTGATTTGTCTTCAAGTTTCCAGAAGTGCCTTCCCTCAATCAATCGAGTGAGGGATGGCAAACTTGTTGAGAAACCCCAAGAAAGTGCGGGCTTACTCCAGTTTAAGCCTTTTGACTACGAAGCAGCAAAGAAGCAGGTAATTTTCAGGGAAGATCCTAGTCCAAGGGCTGAGGATAGTAGGAGTAGGCTTACCAAGGGAGATAAGAAATCCCAGAAGGAAGATGGGACAAGAGATTTACCACAGGGTAGGAGACGCCAGGCCTTTCCAGCGTCAGGAAATCGAACTGCAACATTCCGCTGA
Protein Sequence
- >GSCOC_T00036370001
MEVEPSEEESSKTVANLLSDIAIKGPLPSSVAKLSGSSRGIPSEKDFHFYKNFNEFKTPIKEIDDKSKSLLERIGVSSQLWGKALEFPRNLDFDDIDAYDWLVNINDDVLEKLDASLDEFRVGRGEESGFQVVQGRKNRRGVASGSEEAVRGVQVAVKPKPKVPFHIATIPRPQDEYKFIVNNSNQPFEHVWLQRSEDGSRFVHPLENHSFLDFVDRSTSNVTPVKPHPLESTPFMLVEDVKDLKKLAAKLKVADEFAVDLEHNQYRSFQGLTCLMQISTRSEDFVIDTLKLRIHVGPYLREAFKDSNKKKVMHGADRDIIWLQRDFGIYVCNLFDTGQASRVLKLERNSLEYLLHHFCGVTANKEYQNADWRLRPLPHEMLRYAREDTHYLLYIYDLMRMKLLSASSETEDVNPPLEEVYKRSYDVCMQLYEKELLTDRSYLHIYGLQGADLNAQQLAVVAGLCEWRDVVARAEDESTGYVLPNKTLIEIAKQMPLTTSKLKRSLKSKHPYIERNLGSVLSIIRHSMQNAAAFEVAAQQLKEQHVERATENILVAEVDEVLPSEAPEILKTVGDAEGVTLGTLSSNTMLGHSMVSVQQENKLVDPGCSTGGITANSQAIHKSPGESGSINSAADSYTAAIPRAAACGASESSGEAGASVQVLKKPSRGFGALLGGSTKRKLHPDIKEDQKLEEIKSSVNLPFHAFPSSGELLQPAAQERAALVDTLHNGQPVSNSSNLEDFILLGAGSDVESGDNGTEAVNVVVDNKEDNAVGSTLDMEEEEGEGEDTMSLSDLSSSFQKCLPSINRVRDGKLVEKPQESAGLLQFKPFDYEAAKKQVIFREDPSPRAEDSRSRLTKGDKKSQKEDGTRDLPQGRRRQAFPASGNRTATFR