Information report for GSCOC_T00029441001
Gene Details
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Functional Annotation
- Early Flowering 6 (ELF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a repressor in the photoperiod pathway. ELF6 interacts with BES1 in a Y2H assay, in vitro, and in Arabidosis protoplasts (based on BiFC). ELF6 may play a role in brassinosteroid signaling by affecting histone methylation in the promoters of BR-responsive genes.;Encodes a JmjC domain‐containing protein that functions in demethylation of H3K4me3 in RFT1
Homologous
- Actinidia chinensis: Achn204031, CEY00_Acc03787
- Capsicum annuum: T459_14455
- Nicotiana benthamiana: Niben101Scf00751g06003.1, Niben101Scf18328g00009.1
- Nicotiana tabacum: XP_016462121.1
- Petunia inflata: Peinf101Scf02425g00011.1
- Populus trichocarpa: Potri.010G224700.1, POPTR_010G224700v3
- Sesamum indicum: XP_011084321.1, SIN_1004762
- Vitis vinifera: GSVIVT01016246001
Gene Resources
- Pfam: PF02373 PF02375
- UniProt: A0A068TU52
- EMBL: HG739088
- OMA: DWTSRMG
- InterPro: IPR003347 , IPR003349 , IPR013087 , IPR036236
- PANTHER: PTHR10694 , PTHR10694:SF45
- SUPFAM: SSF51197 , SSF57667
- PROSITE: PS00028 , PS50157 , PS51183 , PS51184
- Gene3D: 2.60.120.650 , 3.30.160.60
- OrthoDB: A0A068TU52
- STRING: 49390.A0A068TU52
Sequences
CDS Sequence
- >GSCOC_T00029441001
ATGGGGGTTGTGGAAATACCAAAATGGCTTGAAGAGTTGCCTTTGGCACCAGAATTCCGGCCAACAGATACTGAATTTGCAGACCCAATAGCTTATATATCAAAGATTGAGAAAAAAGCAAGTGCCTTTGGTATATGTAAAGTGATTCCACCATTGCCTAAGCCTTCAAAAAGATACGTTCTTTATAACTTGAATAAGTCACTTTCCAAGTGTCCAGAATTGGGTTCGGAGGCTCGGGCAGTCTTTACAACTAGGCATCAGGAATTAGGTCAGAATGGGAAGAGGGTGAAGGGAGCAGCTGGGAATCAGTTGATAGGAGCTCCAAAGCAAGTATGGCAAAGTGGGGAAGTTTATACATTGGAACAGTTTGAAGCGAAGTCAAAGAATTTTGCTAAGAGTCAACTAGGGGTGGTTAAAGAGGTTTCCCCATTAGTTATAGAAGCAATGTTTTGGAAAGCTGCTTCAGAGAAGCCCATATATGTGGAGTATGCAAATGATGTGCCTGGCTCTGGATTTGGAGAACCAGAGGGATCATTTCGATATTTTAATAGGCGAAGGAGGCGGAGGCGGAAAAGGGGGACTTTCGATAGAAATAACCAAGGTAGTTCCTGTAACAATGACCATGTAACTAACTGGGTTTCTGGAGCATCTACATCGCTACCATCCATGTCATTGGACCAGTCTGAAAATTTTTCTGATGGAAAGTTTTCAAATGCTAGTAATGAGATGCATGGAACAGCAGGTTGGAAGCTATCAAACAGTTCTTGGAATTTGCAAGTAATTGCAAGATCTCCTGGGTCACTGACACGCTACATGCCAGATGATATACCTGGTGTTACTTCTCCAATGGTTTACATTGGAATGTTATTCAGCTGGTTTGCTTGGCATGTTGAAGATCATGAACTTCATAGCTTAAATTTCCTTCATACGGGCTCCCCAAAGACATGGTATTCAGTTCCAGGAGATTATGCATTTGATTTTGAAGAGGTCGTTCGCCTTCAAGCTTATGGGGGAAATACTGACTCTTTAGATGCACTGACTCTCCTGGGTGAGAAGACTACTCTTTTTTCACCAGAAGTTATTGTTGCAGCAGGCATCCCATGTTGTAGGCTAGTTCAGAATCCTGGTGAGTTTGTTGTGACTTTCCCAAGGGCTTACCATGTAGGATTCAGCCACGGTTTTAATTGTGGAGAAGCTGCAAACTTCAGTACTCCTAAGTGGCTTACAATAGCCAAAGAAGCCGCTGTTCGCAGAGCTGCGATGAATTACTTGCCCATGCTTTCTCATCAGCAGCTGCTATACCTGTTGACAATGTCTTTTGTATCAAGAGTGCCAAGATCCCTACTACCAGGAGCACGAAGCTCTCGTCTCAAAGACCGTCAAAAGGAAGAACGCGAGCTCTCGGTAAAGAAAGCATTCATAGAAGATATTTTAAAGGAAAACCATCTGCTAACTATTCTTCTTCAGAAAAATCCATCTTATCGTGTGGTACTATGGGATGTGGATTTGCTGCCAGCTTCAAGTAAGGACTCTGAATTGTGCAGTACTGTTGTAACTGATGGGACACAAACAAGAGAAGACAGTCATCTTGACAACTGCAGTAACCAAGATCTTTACACGCAGATGAGCTTGTATATGGACACTATTACTGATTTTTATGTAGATGATGCTGATGACATACAAAATGATTATCAAGTTGATTCTGGAACTTTACCCTGTGTTGCCTGTGGTATTCTTGGTTTTCCTTTTATGGCTGTGGTACAACCATCTGAGCAAGCATCGAGAGACCTGGTGCCTGAGGATCAGGCTATGACTCAACAATTAGGAGTTTGTCAACCAGCGGGTTGTAAATCCTTGGATCTTGATTTTAGGGCTGAAAGCTGTATTCCAGAGACAAGAAAGCTAGTTAAGAAGAATATTAACCATCCAGATGAAGCATCTCCTTTTGCTGAATCTAGCCCATCCACTTGTTCTCATATGGAGGAGGATGCCCTGTCTGTAGACATTAATACTTCATCATTTCCAGTGCACGTAACGGCTTCTTCAGCAGTCAAGTTTGACAGGGGGTGGAACCTTTCAACTGGCTATTTCAGACCTCAATTGTTCTGCCTGGAGCACGCAATTGAAACCGTGGAGCTATTGCGCCCCAAAGGTGGTGCAAATGTGCTTGGAATATGCCATTCAGACTTCCAGAAAATAAAAGCACACAGTGCAGTTGTAGCGGAGGAAATTAGCATCCCTTTTAACTACAACGAGATTCCATTAGGAAATGCATCCCAGGAAGACCTGTACCTGATTGATCATGCAATTGAAAATCAAGAAAAAGATGAAGGTGCACAAGATTGGACCTCAAAATTGAATCTCAACTTACGCCACTGTGTAAAGATGAGAAAGAACTTCCCATCCCAGAAAGTGAAGCATGCGTTGGCTTTAGGTGGGTTGTTTTCTGATGGAGTTCTTCACTTAAAGGCTTTGAAGTGGCAATCCAGGAAATCACGTTCAAAAAGGAATTCAGATCCTACAAACTTTAGTAAGCCATCTGTGAGCATCCAGACTGAGAAAGTTGAAGAACCGGTAGAAAAGTCGGGAAGCAGAATGAGTAGGAAACTAGGTCAAGTAATGATCCAATATTATAGGAAAAGATACAAGTCGAAGCCTCGTGGTTCTGAGGGAGCCATTAAGGCCTTGGTGGTTTCTGAGAAACATCCTTCTGATGAAATTTCTGGTGCTGACAGTGGAAATTGCAAGGAAAAGGAGAGAGACATGTCTATGAATACTCATGTTAGAGTTGAAGGGCCAACTTGTTTGGCCTACAGTAGGAAGTCTAAGTTGCGGAATGAAGGTCAAAAAGTTGTATCAGGTGGAGGTCTGAATGAAAATCCTTCTCCATTGAAACTTGTAGATTCTTCTATTGCTACTAACCCAGTGGCTGGGAATATAAATGTTCATACTGGAAGTGGTATGTCAGACGAACTTGTCGAGCTGAATAAAAACTACAATTTACTTTTGAAGGACTCCCACAAATTGTCCATGATCAATGTTGCCGAGGAAACTGACGAAAACCATGACTCAGTAAATTCTGAAAATTCTGCAGGTTCACTTGGCATTTCTGTTTATGATACTGAAAGTTCTGAAGTGATGAGGGAGGATGAAATTGTCTGTCAAATCAACATGGCAAAGAGGACATGTGATGTCGTAACAACAAATGAATCTGAAAGGAAGTATCACAGAAAGGCTGATGGGGATGTTCTCATGAAAGAGGCCTCTGAACCTGCCCCGTCATGTCCTCATGCTGATGAATCTTCTGGGGAAAGGTGCAATCAACAAGTTGAGACAACAGTTCTAGATAAATGTCAAATGAGCAGTGGCGAAATGGAGAAAGAAATCTCCTCAATGAAGGGAGCTGATCGGGAAAGAGCTGTTTCAAGTGATGTTCTGACATCGAATACATCTAACCCTTCCTTGACGGAAGAACTTGAAGCACCTCGAGAGATGCCTGCTGATGATCAACAGCAACAACAATTCCAACATACTGAAAAAATGAGAAGCAAAAGAAAAAGAGAAGTGGATATCCAAAATGAAGATCAACCAAATTTTGGCAGCTTCAGTAGAAGTCCTTGTGAAGGTCTAAGGCCAAGGACCAAAAGAGATGCTGCAGGAGACACGACTGGTGCCGAAAAGCCCTTTGAGGATTTAAGCAAAGGAAGGAAGGTGAACAAGCATTTAAATGGTTCGGATCTGCACAAGCACAAGAGAGAGCAAAAGAGATGCTCTCACAAGTGCAGCATAGAAGGCTGCCGAATGAGCTTCCAGACCAAGGCAGAGCTAGTCCTACACATGCGTGATCGCTGTCCAGTACAAGGGTGTGGGAAAAGGTTCAGCTCCCACAAATATGCAACATCTCACCAGCGGGTTCATGATGATGATAGGCCACTAAAATGTCCGTGGAAGGGGTGCAGAATGACATTTAAGTGGGCTTGGGCAAGGACTGAACACATACGAGTCCACACCGGGGAGAGACCATACAAGTGCAAGGTTGATGGGTGTGGCCTTAGTTTCAGGTTTGTATCAGACTTCAGTCGGCATAGACGGAAAACTGGCCATTATGTCAACTAA
Protein Sequence
- >GSCOC_T00029441001
MGVVEIPKWLEELPLAPEFRPTDTEFADPIAYISKIEKKASAFGICKVIPPLPKPSKRYVLYNLNKSLSKCPELGSEARAVFTTRHQELGQNGKRVKGAAGNQLIGAPKQVWQSGEVYTLEQFEAKSKNFAKSQLGVVKEVSPLVIEAMFWKAASEKPIYVEYANDVPGSGFGEPEGSFRYFNRRRRRRRKRGTFDRNNQGSSCNNDHVTNWVSGASTSLPSMSLDQSENFSDGKFSNASNEMHGTAGWKLSNSSWNLQVIARSPGSLTRYMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSLNFLHTGSPKTWYSVPGDYAFDFEEVVRLQAYGGNTDSLDALTLLGEKTTLFSPEVIVAAGIPCCRLVQNPGEFVVTFPRAYHVGFSHGFNCGEAANFSTPKWLTIAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFVSRVPRSLLPGARSSRLKDRQKEERELSVKKAFIEDILKENHLLTILLQKNPSYRVVLWDVDLLPASSKDSELCSTVVTDGTQTREDSHLDNCSNQDLYTQMSLYMDTITDFYVDDADDIQNDYQVDSGTLPCVACGILGFPFMAVVQPSEQASRDLVPEDQAMTQQLGVCQPAGCKSLDLDFRAESCIPETRKLVKKNINHPDEASPFAESSPSTCSHMEEDALSVDINTSSFPVHVTASSAVKFDRGWNLSTGYFRPQLFCLEHAIETVELLRPKGGANVLGICHSDFQKIKAHSAVVAEEISIPFNYNEIPLGNASQEDLYLIDHAIENQEKDEGAQDWTSKLNLNLRHCVKMRKNFPSQKVKHALALGGLFSDGVLHLKALKWQSRKSRSKRNSDPTNFSKPSVSIQTEKVEEPVEKSGSRMSRKLGQVMIQYYRKRYKSKPRGSEGAIKALVVSEKHPSDEISGADSGNCKEKERDMSMNTHVRVEGPTCLAYSRKSKLRNEGQKVVSGGGLNENPSPLKLVDSSIATNPVAGNINVHTGSGMSDELVELNKNYNLLLKDSHKLSMINVAEETDENHDSVNSENSAGSLGISVYDTESSEVMREDEIVCQINMAKRTCDVVTTNESERKYHRKADGDVLMKEASEPAPSCPHADESSGERCNQQVETTVLDKCQMSSGEMEKEISSMKGADRERAVSSDVLTSNTSNPSLTEELEAPREMPADDQQQQQFQHTEKMRSKRKREVDIQNEDQPNFGSFSRSPCEGLRPRTKRDAAGDTTGAEKPFEDLSKGRKVNKHLNGSDLHKHKREQKRCSHKCSIEGCRMSFQTKAELVLHMRDRCPVQGCGKRFSSHKYATSHQRVHDDDRPLKCPWKGCRMTFKWAWARTEHIRVHTGERPYKCKVDGCGLSFRFVSDFSRHRRKTGHYVN