Information report for GRMZM2G059958
Gene Details
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Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Setaria italica: SETIT_016290mg
- Setaria viridis: SEVIR_1G332000v2
- Triticum aestivum: TraesCS6A02G318300
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: A0A3L6ES92
- EMBL: NCVQ01000006
- AlphaFoldDB: A0A3L6ES92
- KEGG: zma:103627761
- OMA: SSRGEMF
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF381
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- OrthoDB: A0A3L6ES92
- SMR: A0A3L6ES92
Sequences
CDS Sequence
- >GRMZM2G059958
ATGGAGGAGGGCAGCAAGGCGCAACTGCCGCCCCCACTTCACACTGAAGCCATGGACCAGCTGCCCCCAGTCCTAATGGACCAAGACGAGGGTCGGGAAGCTGCGGAAACCATGGAGGAGGAAGAAGCCGCCGCCGCAGACATCTCCGACGCCGCGGATCCCATGGACGATGGGGAGGCGGCAGGAGATTCCGCGGCAGCCGCGGAACCCATGGAGGACGACGCGCCCACGTCCTCCCCGACTCCCTCCGCGCCGTCGGCCACCGCGGCCGTTGACGACTCCACCATCGCTCGGAAGCGCCGCCGCCGTAAGAAGCAGTTCCCGGGTATGATCCCCACGGCCGGCGTCCGCGTCCTGCGCGGCTCCTCCTCCTCATCCTCCCACACCGCGGCTCATCTGTCCGGCGTCCCCCGCCGCCGGGGGCGGCCCCCCACCTCCTCCTCCCTCCGCCTCGCCCGGGAGCTGGATTCTGAGGCCCTCATCGCTCTCGCTGCGGGGTTCCCCGCGGACTCCCTCTCCGAGGATGAGATCGTGGCCGCCGTGCTCCCACGCATTGGCGGCGCCGAGCAGTCTAACTACCTTGTCGTTCGCAATCACATTGTAGCGCTCTGGCGTTCCAATCCCCTCTCCCCCGTTGCCGCTAACGCCGCGCTCGCATCTATTCGCGCCGAGCACGCTCCCCTTGTTGCCGCGGCGCATTCCTTCTTGTCTGAGCACGCATACATTAATTTCGGTCTTGCCCCCGCCGTCCTCTCGCTTCCCCCACAGCCTCCTCCCTCTTCTCCTCCCCCATCCGTCCTTATTGTTGGCGCTGGCCTTGCCGGTCTAGCTGCTGCACGGCACCTGATTGCGCTTGGATTCAAGGTGGCCGTCATTGAAGGCCGGCTCCGCCCCGGGGGCCGTGTGTTTACCAAGACAATGCGTTCTTCTGCTGTAGAGTATCCCGACACTGTTGCTGCTGCTGACCTTGGAGGCAGCGTTCTCACCGGTATCAATGGTAATCCCCTTGGTGTCATTGCTCGGCAGCTTGGATTCCCACTCCACAAGGTGCGGGATAAATGCCCACTGTATCTTCCAGATGGCCGCCCAGTTGACCCTGACATGGATGCTCGTGTTGAGGCTGCCTTTAACCAGCTTCTGGACAAGGTTTGCCAGTTGAGACAGGTGATTGCAGATGGTGTACCACATGGTGTTGATTTGTCATTGGGCATGGCACTTGAAGCATTCCGGGCAGCGCATGGTGTTGCAGCTGAGCATGAAGAAAGGATGCTTCTGGACTGGCATTTGGCAAACCTGGAGTATGCTAATGCTGCCCCACTTGCTGATCTCTCCATGGCCTTCTGGGACCAGGATGATCCATATGAAATGGGCGGAGACCACTGCTTTATTCCTGGTGGAAATTCTCAGTTTGTCCGTGCATTTAGTGATGGAATCCCGGTATTTTACGGGCAGAATGTGAAAAGGATACGATATGGGCGTGATGGTGTGATGGTGCACACTGATAAACAGGCATTTTGTGGTGATATGGTCCTGTGTACGGTTCCTCTTGGGGTGCTAAAGAAGGGTGACATAAAGTTTGTGCCTGAGCTGCCAGCTCAGAAAAAAGAGGCCATCCAGAGATTGGGTTTTGGTCTGCTTAACAAGGTTGTGATGTTGTTCCCTTATGATTTCTGGGATGGCAGGATTGATACATTTGGTCACTTGACAGAAGATTCTAGGCAGCGTGGTGAGTTCTTCCTGTTCTACAGTTATTCTTCTGTCTCAGGAGGGCCATTGCTCATTGCTCTTGTTGCGGGGGAATCTGCAGTCAAGTTTGAGCAGGCTTCACCTATGGAAAATGTTGAGAAGGTACTGGAAACACTTAGGAAAATCTTTTCACCCAAGGGTATTGAAGTTCCAAATCCGTTGCAAGCAATATGTACTCGATGGGGCACAGACAGGTTTACTTATGGATCATACTCATATGTGGCTATTGGGGCTTCTGGTGATGACTACGACATTTTGGCCGAAAGTGTGCATGATAGAGTTTTCTTTGCTGGAGAGGCAACAAATAGGCGGTACCCAGCTACAATGCATGGAGCCCTGCTTAGTGGGTATAGGGAGGCTGCTAACATCTTAAGGGCAGCTAGAAGGAGAGCAAAAAATGTGTACTCACCTGAGAAAATGGATATTAATGTTGATGTAAAAGTGGGTGTTAATGGTGAACTAAAAGACACTGTTAGAGATAGCTGCATTGATTTGGATGATCTATTCCGTTCTCCTGATGCTGCTTTTGGCGGGTTCTCAGCTCTCCATGACCCATCTACCTCTGAACCAGACTCAGTTTCTTTGCTGCGTGTTGGAATTGGTGCTAGAAAGTTAGGTGCTGGTTCACTTTTCCTCTATGGATTAATAATGAGAAAGCATGTAGCTGTGTTGGCTGCAATTGAGGGTGATGAACAACGGTTGAGTATAATGTATCGAGATTTTGGGACAAAACTGGTGGGATTGGATAGTTTGGGTGATGCTGGGGAAAGCCTTATCTCCCGGATAAAGGCTGCTAGGAAGTAA
Protein Sequence
- >GRMZM2G059958
MEEGSKAQLPPPLHTEAMDQLPPVLMDQDEGREAAETMEEEEAAAADISDAADPMDDGEAAGDSAAAAEPMEDDAPTSSPTPSAPSATAAVDDSTIARKRRRRKKQFPGMIPTAGVRVLRGSSSSSSHTAAHLSGVPRRRGRPPTSSSLRLARELDSEALIALAAGFPADSLSEDEIVAAVLPRIGGAEQSNYLVVRNHIVALWRSNPLSPVAANAALASIRAEHAPLVAAAHSFLSEHAYINFGLAPAVLSLPPQPPPSSPPPSVLIVGAGLAGLAAARHLIALGFKVAVIEGRLRPGGRVFTKTMRSSAVEYPDTVAAADLGGSVLTGINGNPLGVIARQLGFPLHKVRDKCPLYLPDGRPVDPDMDARVEAAFNQLLDKVCQLRQVIADGVPHGVDLSLGMALEAFRAAHGVAAEHEERMLLDWHLANLEYANAAPLADLSMAFWDQDDPYEMGGDHCFIPGGNSQFVRAFSDGIPVFYGQNVKRIRYGRDGVMVHTDKQAFCGDMVLCTVPLGVLKKGDIKFVPELPAQKKEAIQRLGFGLLNKVVMLFPYDFWDGRIDTFGHLTEDSRQRGEFFLFYSYSSVSGGPLLIALVAGESAVKFEQASPMENVEKVLETLRKIFSPKGIEVPNPLQAICTRWGTDRFTYGSYSYVAIGASGDDYDILAESVHDRVFFAGEATNRRYPATMHGALLSGYREAANILRAARRRAKNVYSPEKMDINVDVKVGVNGELKDTVRDSCIDLDDLFRSPDAAFGGFSALHDPSTSEPDSVSLLRVGIGARKLGAGSLFLYGLIMRKHVAVLAAIEGDEQRLSIMYRDFGTKLVGLDSLGDAGESLISRIKAARK