Information report for GQ55_5G527400
Gene Details
|
|
Functional Annotation
- Encodes a homolog of the mammalian protein CstF77, a polyadenylation factor subunit. RNA 3′end鈥損rocessing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC.
Homologous
- Brachypodium distachyon: BRADI_4g03980v3
- Hordeum vulgare: HORVU3Hr1G013370
- Oryza sativa: LOC_Os12g38380, OsCstF77
- Setaria italica: SETIT_000539mg
- Setaria viridis: SEVIR_5G150500v2
Gene Resources
- Pfam: PF05843
- UniProt: A0A2T7DSZ3
- EMBL: CM009753
- AlphaFoldDB: A0A2T7DSZ3
- InterPro: IPR003107 , IPR008847 , IPR011990 , IPR019734 , IPR045243
- PANTHER: PTHR19980 , PTHR19980:SF0
- SUPFAM: SSF48452
- PROSITE: PS50005
- Gene3D: 1.25.40.1040
- OrthoDB: A0A2T7DSZ3
- STRING: 1504633.A0A2T7DSZ3
Sequences
CDS Sequence
- >GQ55_5G527400
ATGCCTGAAGAGAAATCAGGAGGAGGAGGAGGAGGAGGAGGAGGCGGAGGCGGCGGCCATGGCGATGGCGGCGACATCTACAACGTCCAGGCCGCCGAGATCCTCGCCAAGGAGGCCCTCCTGCTCCCCATCAACGAGGCCGCCCCCATCTACGAGAAGCTTCTCGCCACCTTCCCCACAGCTGCCAAATACTGGAAGCAGTATGTCGAAGCCTACATGGCCACCAACAATGACGAAGCCACCAAGCAGATTTTCAGCAGATGCCTGCTCAACTGCCTCCACATTAGCCTTTGGCGCTGTTACATCAACTTCATCAGGAGAATTAATGATAAAAGGGGCTCCGAGGGTCTTGATGAGACAAAAAAGGCCTTTGACTTCATGCTGAACTATGTTGGGAATGATGCCGCTTCTGGCCCTGTTTGGATGGAGTATATTACATTCTTGAAGTCAATGCCTGCTGTGACGCCCCAGGAAGAGTCGCATCGCATGACTACTGTACGTAAAGTGTACCAGAAAGCAATTTTAGTTCCAACTAATCATGTAGAACAGCTATGGAAGGATTATGAGAACTTCGAGAATTCTGTCAGCCGCACCTTGGCAAAAGGTTTGTTATCTGAATATCAACCAAAATTTAACAGTGCTAAAGCTGTATATAGAGAGCGGAAAAAATACATAGATGATATTGATTGGAATGTGCTGGCCGTCCCCCCTACAGGCTCTTACAAGGAAGAGCAACAGTCTATGGCATGGAAAAGACTCTTGGCATTTGAAAAGGGTAATCCTCAAAGGATAGATGTTACAACAGCTAATAAGCGTGTTACGTTTACTTATGAGCAATGCCTGATGTATCTATATCATCATCCTGATATATGGTATGATTATGCTATGTGGCATGCGAAGAACGGTTCTATGGATTCAGCAGCTAAAATATTTCAGCGTGCTCTAAAAGCGATCCCTGATTCTGCAGTACTTAAGTATGCTTTTGCTGAAATGGAAGAGTCCAGAGGGGTAATACAGACTGCGAAGACAATATACGAGTCTCTTCTAGGTGAAAATGCTAGCGTGACCTCACTTGCACACATTCAGTTTATTCGGTTTCTAAGGAGAACTGAAGGCATTGAAGCAGCTCGTAAGTACTTTTTGGATGCTCGAAAGTCACCAAGCTGCACTTATCATGTGTATGTTGCTTATGCTACAATGGCATTCTGCCTCGACAAGGATGCAAAGGTGGCACAAAGCGTGTTTGAAGCAGGTTTAAAGAGATTTATGCAAGAGCCAGGATACATCCTTGAATATGCGGACTTCCTGTGTCGTTTAAATGATGATAGAAATGTGCGTGCTTTGTTTGAGAGAGCACTAAGCTTACTTCCTCCTGAGAAATCCATAGAGGTATGGAAGCGGTTTGTTCAATTTGAGCAGACTTATGGGGACTTGTCAAGCATGCTTAAGGTTGAACAAAGAAGGAAGGAGGCTCTATCTAGGACATCAGAAGATGTCCTATCTGCATCAGAAAACACACTTCATGACGTAGTTTCTCGATACAGTTTTATGGATCTTTGGCCATGTTCATCAAAAGAATTGGATTATCTAGTGAGACAAGAGTGGCTTGCAAAAAACACTGTTAAGGTTGACAGATCAGCTACGCTAAATACCGGTAGTATGCTAGATAAAGGTACTGTGGGAATTAGTGCAAGTGCGAGGTCGCTACCACGATCTGGAAAAGTTGTTCGTCCTGAGACTTCCCAAATGGTTATTTATGATCCAAGACAGATGAAAGGCCCAGAGTTTTCGGCGGCTACCAGTGGGTACACGAAGGAGGTTGAAGACATGCTCAAAATGCTATCTCCGTCGACTACGTCTTTCATCAAGAATTTGCCTGCTATTGAAGGACCATCGCCGGATATTGATGTGGTGCTCAGCGTGCTGCTTCAGAGCACATTGCCAGTCGCACAGAATGCTGGGAAAGCAGGTGGCGCGAGTGAGCTCTCGGGCGTCGGCAAATCTGGACTAAACCAGAATGGATCTGTTCATAGACCTCCAAGAGAGAGGAGGAAGGATGCCGGAAGGCACGGGGTGCAGGAGGAAGAGGATGCGGCGACGGTACAGAGCCAAGCCGCAGTGCCAAGGGACATATTCAGGCTTCGGCAGATCCAGAGGAGCCGAGGGTTGGGCGTGGGTGGTGTCGCTGCTGCCTCGCAGTCTGGATCCTCGGCATTCTCCTTCTCCGGCGGTGGAAGCGCCTTCTCCGGGGACCACTCTGCGGGCACAGACTAG
Protein Sequence
- >GQ55_5G527400
MPEEKSGGGGGGGGGGGGGHGDGGDIYNVQAAEILAKEALLLPINEAAPIYEKLLATFPTAAKYWKQYVEAYMATNNDEATKQIFSRCLLNCLHISLWRCYINFIRRINDKRGSEGLDETKKAFDFMLNYVGNDAASGPVWMEYITFLKSMPAVTPQEESHRMTTVRKVYQKAILVPTNHVEQLWKDYENFENSVSRTLAKGLLSEYQPKFNSAKAVYRERKKYIDDIDWNVLAVPPTGSYKEEQQSMAWKRLLAFEKGNPQRIDVTTANKRVTFTYEQCLMYLYHHPDIWYDYAMWHAKNGSMDSAAKIFQRALKAIPDSAVLKYAFAEMEESRGVIQTAKTIYESLLGENASVTSLAHIQFIRFLRRTEGIEAARKYFLDARKSPSCTYHVYVAYATMAFCLDKDAKVAQSVFEAGLKRFMQEPGYILEYADFLCRLNDDRNVRALFERALSLLPPEKSIEVWKRFVQFEQTYGDLSSMLKVEQRRKEALSRTSEDVLSASENTLHDVVSRYSFMDLWPCSSKELDYLVRQEWLAKNTVKVDRSATLNTGSMLDKGTVGISASARSLPRSGKVVRPETSQMVIYDPRQMKGPEFSAATSGYTKEVEDMLKMLSPSTTSFIKNLPAIEGPSPDIDVVLSVLLQSTLPVAQNAGKAGGASELSGVGKSGLNQNGSVHRPPRERRKDAGRHGVQEEEDAATVQSQAAVPRDIFRLRQIQRSRGLGVGGVAAASQSGSSAFSFSGGGSAFSGDHSAGTD