Information report for Gohir.D13G185401
Gene Details
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Functional Annotation
- Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.
Homologous
- Actinidia chinensis: CEY00_Acc28201
- Citrullus lanatus: Cla97C08G156060
- Cucumis melo: MELO3C011203
- Cucumis sativus: CsGy2G022660
- Glycine max: Glyma.14G132500, Glyma.04G074300
- Juglans regia: Jr11_28260
- Manihot esculenta: MANES_18G079200
- Medicago truncatula: Medtr3g108660
- Nicotiana attenuata: A4A49_14084
- Populus trichocarpa: POPTR_002G081600v3, POPTR_005G179500v3
- Prunus avium: Pav_sc0003562.1_g090.1.mk
- Prunus persica: PRUPE_1G462800
- Rosa chinensis: RchiOBHm_Chr6g0312261
- Vitis vinifera: VIT_04s0008g03170
Gene Resources
- Pfam: PF00443
- UniProt: A0A1U8HPK7
- RefSeq: XP_016667941.1 , XP_040965234.1 , XP_040965235.1
- AlphaFoldDB: A0A1U8HPK7
- KEGG: ghi:107888369
- InterPro: IPR000626 , IPR001394 , IPR006615 , IPR018200 , IPR028889 , IPR029071 , IPR033841 , IPR035927 , IPR038765 , IPR044743 , IPR050164
- PANTHER: PTHR24006 , PTHR24006:SF722
- SUPFAM: SSF143791 , SSF54001 , SSF54236
- PROSITE: PS00972 , PS00973 , PS50053 , PS50235 , PS51283
- Gene3D: 3.10.20.90 , 3.30.2230.10 , 3.90.70.10
- OrthoDB: A0A1U8HPK7
- CDD: cd01795 , cd02668
- STRING: 3635.A0A1U8HPK7
Sequences
CDS Sequence
- >Gohir.D13G185401
ATGAACTCTCTTGTTCATTTCTCCCCAAATTGCCCAAAGAGCGCAGTAAAAGATCCTGCACCGAGAGGGGGTATTCTGTTCAAAAACCCAGCAGGGTCGGTCAATGATAAAATGAGCCGACCAACAACCCGTTGTAAAAATAAAAGACACAGACAGGTGGAGAATGATGATACAACTACTGAAATATTAAGGAAAATTCACCTGACAGGTGAAATAACTGATGATGATGTAAATCAGCTGTACATGATCACAAAACCGGTTTGTCAAGGCTGTCGTGTGAATACTAAGGACAACCCGAATTGTTTTTGTGGGTTGATTCCACCTCCTAATGGCAGTCGGAAAGCTGGCTTATGGCAGAAAATGTCGGATATTATTCAAGCTCTTGGTCCAGATCCATGTAAAGATCTCCGTGCTTCTGCTTACTCACCTGCAGGTCTTACGAATCTGGGTGCAACATGCTATGCTAACAGCATTTTACAGTGCTTGTACATGAACAAATCATTTCGACAAGGTGTTTTCTCTGTTGAACCTGATGTTTTGAACCGACATCCTGTCTTAGATCAACTTGCACGACTTTTTGCGCAGTTGCATGCTAGTAAAATGGCTTTCATTGACTCTGCCCCTTTTATAAAAACACTCGAGTTAGATAATGGAGTTCAACAGGATAGCCATGAATTCCTGACCTTACTTTTTTCTTTGCTTGAGCGTTGTCTAAGTGATTCTCAAGTTTCCAAAGCAAGGACAATTGTTCAAGATCTCTTTCGAGGAAGTGTATCTCATGTTACAACGTGCTCAAGATGTGGCAAAGATTCTGAAGCTTCTTCAAAGATGGAAGATTTTTATGAGCTTGAGTTAAATGTCAAGGGCCTCAAAACTCTTGAGGAGAGTTTAACTGATTACCTGAGTGTGGAAGAGTTGCATGGCGATAACCAATATTTTTGTGAGTCATGTAACATAAGAGTTGATGCCTCTCGCAGTATCAAGTTGCGGACACTCCCTGATGTGCTTAATTTTCAGCTGAAGCGCTATGATTTCCTTCAAAAGACTACTTCAAAGAAGAAGATTACTTCTGTGTTCTCTTTTCCTGGAAAGCTAGATATGCGGGGGAGGTTGTCAAAGCCTTCTCAAGTGGAATTAATATATGACTTGTCGGCAGTTCTTATTCACAAAGGAACTGCTGCAAACAGTGGCCACTATATAGCTCATATTAAGGATGAGAATACAGGGCAGTGGTGGGAGTTTGATGACGAGCATGTCTCAAACTTGGGTCATCATCCATTTGGAGAAGGCTCTTCAACTTCCAATTCTAAATCTAATCGATCAGATGCAGTTGTTCATTCGTCTTGCACAGGAGGGGATGGCACTGCCAATGGAAATCATTTGGATCCCATTCAGCTGCAACATGAAGAATCTAGTGTTGGGAGTCATATAGAGATGTTTTCATCTACTGATGCCTACATGCTAATGTACAATCTTAGTTCTAAGAAGAATGGTGCCAGCACCATGGAAATAGAAGGGGATGCAGTTTTCTTACATGATGGGATTTCACTTCCATCTCATCTTTGTGAGGAAATAACAAACTTGAATTCATCATATGTTGATGCTTGTGAACAATACAAATTGAAGAAGAAAAGAGAACTAGATCACATAACAGAAAGGAGACAGGAAGTGAGATCAGTGCTGTCTGAAGCTCCTGTTCATTCAGTTGAAGAACCGTTCTATTGGATTTCCACAGACTGGCTTCGCCAATGGGCTGATAATATTTCTCCACCTGTTTTAGATAATACATCTATCCAATGTTCCCATGGAAAAATACCACTTTCCAAAGCTGGCTCTGTGAAGCGATTGTCAGCTGGAGCCTGGACAAAGTTGTCTAAGTACCATGGGGGCCCAACATTTGCCAAAGGTGATCACTGCCTGGACTGCCTTATTGATGTGGCACATACAGTTGTATGTGCAGACAGCTATAGGGATCGAAGAAAATTGATGAAAGAGATTGCAGAAGATGTACTTTTAGCCAAGTGCGAAGATGGAGCCTACTATATATCAAAGGCATGGTTACAGCAGTGGGTGAAAAGAAAAAACCTTGATGCACCTTGTGAAGCTGATGCTGGACCAACAATGTCAATTAGGTGCCCTCATGGGCACCTGATGCCAGAGCAAGCTGCTGGTGCTAAGCGATTGCTGGTCCCTGAGAAGCTATGGCTCTTCTTTTATGAGGATGCAATTACAGTAAAACCTGATGATTCTTCAGGTTGTTCAACTTTTCCTTCCGACTCTGAAGAGTGTCCTGAGTGCAGCAATACACTTTCAGAAGTTGCATGCTTGGAGGATTCTAGAAGAGAAATGAAGCTTAAACAGCGTCAAAACCATGAAAAGTTAGCCACGGGCAAGAGTATCCCGCTGTCTTCAAATTGCAAGTACTACTTGCTGCCTTCTTCTTGGCTTTCAAAATGGAGGAGCTATGTCACTGCAAGCAGCAAACATACTTCATTCATGGAACCTGAAATTCTTGATGGCGTCATTAATTTGCTTAAATGCGAAAAGCATTCACGCCTTCTGGAGAGGCCACCTAAAGTGGCCTACAAACGTGGATCCTTTTTCCAGAAGGGTTCTACTACAGATAGGTTGACCATTATCACTGAGAACGATTGGAAATGCTTTTGTGAAGAATGGGGTGGTACTGAGGAGAATGGCATATCTGCTATAATTGAGCTTTGTAGCTCTAATGATTTGGCTGAATGCTGTGGGGGCATGCCAATGTGTGAGCAGCCGCTTGATCTTCAAAATGAAGTAAATAATGAGAATGAGTCAAGGCAACCAGTGATTAGGACCTGCCCAGAGGTATGTGAGGAGTGCATTGGAGAAAGAGAAAGCTGCGAGTTGATGCAAAAGCTTAACTATGCTGATGAAGATATTTATGTTTATCTTGTACGTGGAAAAGAAGCTCCAAAGTCAATCTTACAAGCATCTGAGTCCTCTGAGCCTGATCGACGAACCTCCAAGCGTTCTCGGAGGACAAACAATGGAAATTTAGTAAATTTAAGAGTTTCTGCAACTACCTCAATATATCAGTTGAAAATGATGATATGGGAATCACTTGGGGTTGTTAAGGAAAACCAAATACTGCACAAAGGATCGCGAGTAATTGATCAGGAAACTGCTACTCTTGCTGACATGAATATATTTCCTGGAGATAGGCTTTGGGTGAAAGATTCTGAAATTCATGAAGATAGAGATATCGCTGATGAGCTTTCTGACCAGAAAATGAATGTTGAAAATATTGAAGAAGGATTTCGGGGAACATTATTGACGGCAAATATTTCATCTCAAGTTGTTTAG
Protein Sequence
- >Gohir.D13G185401
MNSLVHFSPNCPKSAVKDPAPRGGILFKNPAGSVNDKMSRPTTRCKNKRHRQVENDDTTTEILRKIHLTGEITDDDVNQLYMITKPVCQGCRVNTKDNPNCFCGLIPPPNGSRKAGLWQKMSDIIQALGPDPCKDLRASAYSPAGLTNLGATCYANSILQCLYMNKSFRQGVFSVEPDVLNRHPVLDQLARLFAQLHASKMAFIDSAPFIKTLELDNGVQQDSHEFLTLLFSLLERCLSDSQVSKARTIVQDLFRGSVSHVTTCSRCGKDSEASSKMEDFYELELNVKGLKTLEESLTDYLSVEELHGDNQYFCESCNIRVDASRSIKLRTLPDVLNFQLKRYDFLQKTTSKKKITSVFSFPGKLDMRGRLSKPSQVELIYDLSAVLIHKGTAANSGHYIAHIKDENTGQWWEFDDEHVSNLGHHPFGEGSSTSNSKSNRSDAVVHSSCTGGDGTANGNHLDPIQLQHEESSVGSHIEMFSSTDAYMLMYNLSSKKNGASTMEIEGDAVFLHDGISLPSHLCEEITNLNSSYVDACEQYKLKKKRELDHITERRQEVRSVLSEAPVHSVEEPFYWISTDWLRQWADNISPPVLDNTSIQCSHGKIPLSKAGSVKRLSAGAWTKLSKYHGGPTFAKGDHCLDCLIDVAHTVVCADSYRDRRKLMKEIAEDVLLAKCEDGAYYISKAWLQQWVKRKNLDAPCEADAGPTMSIRCPHGHLMPEQAAGAKRLLVPEKLWLFFYEDAITVKPDDSSGCSTFPSDSEECPECSNTLSEVACLEDSRREMKLKQRQNHEKLATGKSIPLSSNCKYYLLPSSWLSKWRSYVTASSKHTSFMEPEILDGVINLLKCEKHSRLLERPPKVAYKRGSFFQKGSTTDRLTIITENDWKCFCEEWGGTEENGISAIIELCSSNDLAECCGGMPMCEQPLDLQNEVNNENESRQPVIRTCPEVCEECIGERESCELMQKLNYADEDIYVYLVRGKEAPKSILQASESSEPDRRTSKRSRRTNNGNLVNLRVSATTSIYQLKMMIWESLGVVKENQILHKGSRVIDQETATLADMNIFPGDRLWVKDSEIHEDRDIADELSDQKMNVENIEEGFRGTLLTANISSQVV*