Information report for Gohir.D05G183500
Gene Details
|
|
Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Actinidia chinensis: CEY00_Acc07494
- Glycine max: Glyma.09G185800
- Juglans regia: Jr11_19040
- Manihot esculenta: MANES_11G098200
- Medicago truncatula: Medtr6g084700
- Populus trichocarpa: POPTR_002G013100v3
- Prunus avium: Pav_sc0000367.1_g050.1.mk
- Prunus persica: PRUPE_1G356300
- Rosa chinensis: RchiOBHm_Chr6g0304051
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: A0A5D2KXU7
- EMBL: CM017627
- AlphaFoldDB: A0A5D2KXU7
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF381
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- SMR: A0A5D2KXU7
Sequences
CDS Sequence
- >Gohir.D05G183500
ATGGAGCCTCCCCAAGATACCTCCGAGAACCCTAACGATGTCCTTTCCGACGATGACTCTTCACCGGAAAACACCAATCCCGACGATCAAGAAATCCCCAGTACGACACTCGACCCACCTATTTCCGATACCCAAGATGAATCCTCCGATCCCGTCCCCGACGAGCAACCCCAAAACACTAATTCGAACCCCGCGGAGCCTGGTCCACCTGCACGCAAGCGCCGCCGCAGAAAGCGTTTCTTTACTGAACTTATCGCCAATCCATCCTTCTCCAAGAACCGTCGCCCTAGAATATCGGGCCTAGCTAGAGAAATGGACACCGAAGCTTTAATCGCGATTTCTGTTGGTTTCCCTGTTGATTCTCTTACCGAAGAAGAAATCGAAGCCAACGTGGTGTCCAGAATCGGAGGCCAAGAGCAAGCCAACTACATCGTTGTAAGAAATCACATTCTGGCTCGCTGGAGATCCAATGTATCCGTCTGGCTGACGCGCGAGCACGCCCTCGAATCAATCCGAGCTGAGCACAAGAACCTAGTGAACGCAGCATACAATTTCCTTCTCGAACACGGTTACATTAATTTCGGTTTAGCCCCGGCTGTTAAAGAAGCGAAATTGAAGTCTTTTGATGGTGTAGAAAGAGCCAATGTGGTGATTGTGGGTGCGGGTCTTTCCGGTTTGGTCGCGGCGAGGCAATTAGTTTCCATGGGGTTTAAAGTTGTCATCTTAGAAGGTAGGACGCGCCCTGGAGGGCGCGTGAAGACAAGGAAGATGAAAGGTGATGGGGTGGTGGCTGCAGCGGATCTTGGTGGGAGTGTTCTTACGGGAATAAATGGAAATCCACTTGGGGTTCTTGCAAGGCAAATGGGATTACCGCTTCATAAGGTGCGAGATATTTGTCCTTTGTATTTGCCAGATGGAAAGGCCGTAGATGCTGATGTTGATTCTAGGATAGAAGTTTCATTTAATAAGCTATTGGATAGGGTTTGTAAGCTTAGGCATTCTATGATTGAGGAAGTTAAATCAGTTGATGTTCCATTAGGGACAGCATTAGAAGCCTTTAGGAGTGTTTACAAGGTTGCTGAGGATTCACAGGAGAGCATGTTGTTGAATTGGCATCTTGCTAATCTTGAATATGCTAATGCTTCCTTGATGGCTAATTTGTCTATGGCCTATTGGGATCAAGATGATCCATATGAGATGGGCGGCGATCATTGTTTCATACCTGGTGGCAATGAGAGGTTTGTTCGAGCACTTGCGGAGGACCTTCCCATTTTCTATGGGAGGACTGTGCAGAGTATCAGGTATGGTATTGATGGTGTTAGGGTTTACGCCGGTGGGCAGGAGTTTTGTGGGGATATGGCTCTTTGCACTGTTCCATTAGGAGTTCTCAAGAAGGGATCGATAGAATTTGTTCCTGAGCTTCCGCAAAGAAAGAAGGATGCCATTCAGAGACTGGGATTTGGGTTGCTGAATAAGGTTGCTATGTTGTTTTCATACAATTTTTGGGGCGGAGAGATTGATACTTTTGGCCACCTGACAGAAGACCCAAGTATGAGAGGCGAGTTCTTTTTGTTTTATAGCTATTCTTCTGTGTCAGGTGGTCCACTCCTTGTTGCTCTAGTTGCCGGAGATGCAGCAATCAAGTTTGAACTGATGTCTCCTGTTGAGTCTGTGAAAAGGGTTTTAAACATATTGCGAGGCATTTTTCATCCAAAAGGGATTGTTGTTCCTGATCCTGTCCAGGCTGTTTGTACCCGGTGGGGAAAGGATCGCTTCACGTATGGATCCTACTCTCATGTTGCTATTGGTTCATCCGGGGATGATTATGATATTCTAGCTGAGAGTGTTGGAGATGGGAGAGTCTTCTTTGCTGGTGAGGCAACTAATAAGCAGTATCCTGCCACAATGCATGGAGCCTTTTTAAGTGGCATGAGAGAGGCCGCTAACATGCTTAGAGTGGCCAGGAGGAGGTCATTGGTTCTATCTGACAAAGTTAATAACGACTTGGAGAAATGTGATACTTTGGATAAGTTGTTTGAGAACCCTGACCTGACATTCGGGAGCTTCTCAGCTTTGTTTGATCCCCATTCTAATGATGTTGGATCGCATGCATTAATAAGGGTCAAATTTCATGGGGATAAATTAACCTCGAGTCACTTGTGTCTTTATGGCTTGATAACGAAGAAGCAAGCCATTCAGTTAAGTGAAATGAATGGAGATGGGAACAGGATGAATTCGTTGTATCGTGACTTTGGGGTGAAGTTGGTTGGTGGTAAAGGGTTATCAAATGTTGCGGAGTTGCTGATATCACGCATCAAAGCAGCTAAACCAACCTAA
Protein Sequence
- >Gohir.D05G183500
MEPPQDTSENPNDVLSDDDSSPENTNPDDQEIPSTTLDPPISDTQDESSDPVPDEQPQNTNSNPAEPGPPARKRRRRKRFFTELIANPSFSKNRRPRISGLAREMDTEALIAISVGFPVDSLTEEEIEANVVSRIGGQEQANYIVVRNHILARWRSNVSVWLTREHALESIRAEHKNLVNAAYNFLLEHGYINFGLAPAVKEAKLKSFDGVERANVVIVGAGLSGLVAARQLVSMGFKVVILEGRTRPGGRVKTRKMKGDGVVAAADLGGSVLTGINGNPLGVLARQMGLPLHKVRDICPLYLPDGKAVDADVDSRIEVSFNKLLDRVCKLRHSMIEEVKSVDVPLGTALEAFRSVYKVAEDSQESMLLNWHLANLEYANASLMANLSMAYWDQDDPYEMGGDHCFIPGGNERFVRALAEDLPIFYGRTVQSIRYGIDGVRVYAGGQEFCGDMALCTVPLGVLKKGSIEFVPELPQRKKDAIQRLGFGLLNKVAMLFSYNFWGGEIDTFGHLTEDPSMRGEFFLFYSYSSVSGGPLLVALVAGDAAIKFELMSPVESVKRVLNILRGIFHPKGIVVPDPVQAVCTRWGKDRFTYGSYSHVAIGSSGDDYDILAESVGDGRVFFAGEATNKQYPATMHGAFLSGMREAANMLRVARRRSLVLSDKVNNDLEKCDTLDKLFENPDLTFGSFSALFDPHSNDVGSHALIRVKFHGDKLTSSHLCLYGLITKKQAIQLSEMNGDGNRMNSLYRDFGVKLVGGKGLSNVAELLISRIKAAKPT*