Information report for Glyma.04G187600
Gene Details
|
|
Functional Annotation
- Encodes a cytosine methyltransferase MET1. Required for silencing of FWA paternal allele in endosperm. Two lines with RNAi constructs directed against DMT1 have reduced agrobacterium-mediated tumor formation.
Homologous
- Daucus carota: DCAR_009626
- Gossypium hirsutum: Gohir.D04G042500
- Juglans regia: Jr09_06540
- Manihot esculenta: MANES_13G119400, MANES_13G155300
- Medicago truncatula: Medtr6g065580, Medtr2g046020
- Nicotiana attenuata: A4A49_19701
- Populus trichocarpa: POPTR_004G134000v3, POPTR_T046100v3, POPTR_018G138000v3
- Prunus avium: Pav_sc0000113.1_g130.1.mk
- Prunus persica: PRUPE_7G183100
- Vitis vinifera: VIT_07s0130g00390, VIT_07s0130g00380
Gene Resources
- Pfam: PF01426 PF00145 PF12047
- UniProt: I1JXB2
- RefSeq: XP_014630288.1
- EMBL: CM000837
- KEGG: gmx:100802765
- OMA: KINDAEC
- InterPro: IPR001025 , IPR001525 , IPR017198 , IPR018117 , IPR022702 , IPR029063 , IPR031303 , IPR043151 , IPR050390
- PANTHER: PTHR10629 , PTHR10629:SF52
- SUPFAM: SSF53335
- PROSITE: PS00094 , PS00095 , PS51038 , PS51679
- Gene3D: 2.30.30.490 , 3.40.50.150 , 3.90.120.10
- OrthoDB: I1JXB2
- SMR: I1JXB2
- CDD: cd04708 , cd04712
- eggNOG: ENOG502QPKK
- STRING: 3847.I1JXB2
- HOGENOM: CLU_002247_0_0_1
Sequences
CDS Sequence
- >Glyma.04G187600
ATGGGTTCAGCTTCTCTTCTAAATCCTTCTCAACCAGGCGTTAAGAAGAATGACAAGAGCAAACAGAAATCGGTCGTTTCCAAAACTGAAGAGGAAGTTATGTTTAAAGATAAACAAAAGAAACGGAGTTTGTCGGAGAGCAGTGAGCAGACTGCTGCTATGCGCAAAATGCCAAAACGTGCTGCGGCATGTAAAAATTTGAAGGAGAAATCCTTTTTGATATATGAGAAGTCCTGCCTCATTGAAACAGAGAAGGATCATATTGTAGAAGAAGAAAGTCTGGCTGTCCGCATGACAGCTGGACAGGATAATGGTTGTCCAAATAGGCGCATTACAGAGTTTATCCTTCATGATGAAACTGGTAAATCCCAGCCACTTGAGGTGCTGGAGGTTGATGATTTGTTTATCACTGGACTTGTATTGCCACTTGAAGCCAGCTCTGGCAAGAAAAAAGAGAAAGGTGTTAAGTGTGAAGGCTTTGGTCGAATTGAATCATGGGATATATCTGGTTATGAAGATGGCTCTCCAGTGATATGGCTTTCTACTGAAGTTGCTGATTATGATTGCCAGAAACCTGCTGCTAGTTACAAAAAAGTTTACGATCTTTTCCTTGAAAAGGCCCGTGCATGTGTAGAAGTATACAAGAAACTTGCAAAGTCCTCTGGTGGTGACCCTGATATAAGTCTTGATGAGTTACTTGCTGGCATGGTGCGGTCTATGAGTGGTAGCAAATGCTTTTCTGGAGCTGCATCTATAAAGGATTTTGTTATTTCACAGGGTGAGTTCATTTATAAGCAACTTGTTGGTTTGGATATGACATCCAAGGCAAATGACAGGATGTTTGCAGATATTCCTGCTCTTATTGCTCTTAGAGATGAGAGTAAGAAACAAGTACATGCACAGGTAATGCCCTCAAATGGGAGTTTAAGGATTGATTCAGGAGTTGGAGATGAAGAAAACAAGAATCAGATGGATTCAGTAGCTTCTGTAAACGAGGAAGATGAGGATGCAAAGCTGGCACGGCTGTTGCAGGAAGAAGAGTATTGGCAATCTATGAACCAGAAGAAAAACTCCAGATCAGCCTCTGCATCGAACAAATACTATATCAAAATTAATGAAGATGAGATTGCCAATGATTATCCTCTACCTGTTTATTATAAAACCTCCCTTCAAGAAACAGATGAGTTTATAGTTTTTGATAATGACTATGACATATATGACACTCAAGATCTCCCTCGAAGCATGCTGCATAATTGGTCTTTATACAACTCAGATGCAAGATTGGTTTCCTTGGAACTTCTGCCTATGAAACCTTGTTCAGATATCGATGTTGCAATCTTTGGATCAGGTATAATGACTTCAGATGATGGAAGTGGGTTTCATCTTGATACTGAGGCTGGCAAATCTTCTTCCGTTGGTTCTGGAGCACAGGTTGCTGATGGAATGCCAATTTATCTGAGTGCCATAAAGGAATGGATGATTGAATTTGGATCATCTATGATTTTCATATCCATCCGAACTGATTTGGCCTGGTATAGACTTGGCAAACCAGCAAAGCAGTATGCTCCTTGGTATGACACAGTATTGAAAACTGCAAGGCTTGCTATAAGCATTATCACCTTGCTGAAGGAGCAGAGCCGAGTATCACGACTTTCCTTTGGAGATGTCATCAGGAAAGTATCTGAGTTTGATAAGAAAGACGGTTCTTACATTTCTTCTGATCCATTGACTGTTGAGAGATATGTTGTTGTCCATGGACAGATAATTCTGCAACTGTTTGCAGAATTTCCTGATGATAAGATCAGAAAGTCTGCATTTGTGACGGGTCTTACAAACAAAATGGAAGAGCGCCACCATACCAAATGGTTGGTGAAGAAGAAGAAAGTTGTGCCAAGGAGTGAACCAAATTTAAATCCTAGAGCAGCAGTGGGTCCTGTTGTATCCAAGAGGAAAGCTATGCAAGCTACAACGACAAGGCTGATCAATAGAATATGGGGAGAGTATTACTCAAACCACTTGCCAGAGGATGCAAAAGAGGGAATTGCTAGTGAGTTAAAGGATGAGGATGAAGTGGAGGAACAAGAAGAAAATGAAGATGATGACAATGAGGAGACAATACTTTTGGAGGGAACCCCAAAGGCACATTCAGCTTCAAAGCAAACCAAAAAATTTTCTGCTGAAACAGAAATAAGGTGGGAAGGGGAACCTGAAGGGAAGACTAGTTCTGGATATCCTGTTTATAAACAGGCAATTATTCGTGGGGAAGTTATTTCTGTAGGAAGATCTGTGTTGGTGGAGGTTGATGAAACAGATGAATTTCCAGACATATATTATGTTGAATATATGTTTGAATCAAAGATCGGAAGAAAAATGTTCCATGGTAGGATGATGCAGCGTGGTTGTCAGACTGTTCTTGGCAATGCTGCTAATGAGAGAGAGGTGTTTTTGACTAATGAGTGCAGGGATTTGGGACTGCATGATGTCAATCAGACAGTTGTTGTAAATATTCAAAATAGGCCTTGGGGACATCAGCATCGAAAGGATAATATCATTGCAGATAGAGTTGACAGGGCTCAAGCAGAAGAAAGGAAGAAGAAAGGACTACCTACTGAATATTACTGTAAAAGCCTGTACTGGCCTGAAAGAGGTGCTTTCTTTAGCCTTCCACTTGATACTTTGGGGCTAGGGTCTGGTGTTTGCCCATCTTGCAAAATACAGGATGCTGAAAAGGAGAAGGATGTTTTCAAAGTAAATTCCTCCAAGTCTGGTTTCCTATTGAAAGGAACTGAGTATTCTCTTAATGATTATATTTATGTAAGTCCCTTCGAATTTGAGGAAATGATAGAGCAAGGAACTCATAAGAGTGGGAGGAATGTGGGGTTGAAAGCTTATGTTGTGTGCCAAGTGCTTGAGATTGTTGTCAAAAAGGAAATTAAAGAAGCTGAAATAAAGTCTACACAAGTCAAAATCAGGAGGTTCTTCCGACCAGAAGATGTATCAAATGAGAAGGCATACTGTTCTGATATACAAGAGGTGTATTACAGTGATGAAACACATATAATCTCTGTAGAATCCATAGAAGGGAAATGTCAAGTCAGAAAAAAGAATGATATTCCCGAATGCAGTGCCCTTGGCAGAATGTTCCAAAATGTTTTTTTCTGCGAGCTCTTGTATGATCCTGCCACTGGGTCACTGAAGAAGTTGCCGGCTCATGTAAAAGTAAAATATTCAAGTGGACAAACATCTGATGCTGCAGCTAGAAAGAGGAAAGGAAAATGTATAGAGGGAGATGATGTTTTAGAGTCCCCAAATGAAGGAAAAACATTAAATGAAAAACGTTTAGCAACCTTGGACATTTTTGCAGGTTGTGGTGGCTTATCAGAGGGGTTGCAGCAGTCAGGAGTTTCATCAACTAAATGGGCTATTGAGTATGAAGAACCTGCTGGGGATGCATTTAAAGCTAATCATCCTGAGGCATTGGTGTTTATTAACAATTGCAATGTTATTCTTAGGGCTGTAATGGAGAAGTGTGGGGACACAGATGATTGTATCTCAACATCCGAAGCTGCAGAATTGGCTGCAAAGCTTGATGAGAAGGAAATAAGTAGTTTACCAATGCCTGGACAAGTTGATTTCATCAATGGTGGTCCTCCATGTCAGGGTTTCTCTGGGATGAATAGGTTTAACCAGAGCAGTTGGAGTAAAGTCCAGTGTGAGATGATATTGGCATTCTTATCCTTTGCCGATTATTTCCGGCCAAGGTATTTCTTGTTGGAGAATGTGAGGAACTTTGTGTCTTTCAATAAAGGGCAGACATTCCGTTTAACTTTGGCTTCACTTCTTGAGATGGGCTATCAGGTGAGGTTTGGTATCCTTGAGGCTGGAGCATATGGGGTTTCCCAGTCAAGAAAAAGGGCATTCATATGGGCAGCCTCTCCTGAGGATGTGCTTCCTGAATGGCCTGAACCAATGCATGTCTTTTCGGCCCCTGAGTTGAAGATTACATTATCAGAAAATGTCCAGTATGCTGCTGTCCGCAGTACTGCAAATGGTGCTCCATTACGTTCAATAACTGTTCAAGATACTATTGGTGATCTCCCAGCTGTTGGCAATGGAGCCTCAAAAGGAAACATGGAGTATCAAAATGATCCAGTCTCATGGTTTCAAAAGAAGATTCGAGGTGATATGGTTGTCTTGACTGATCATATATCAAAGGAGATGAATGAATTGAACTTGATTCGATGCCAGAAAATTCCCAAGAGACCAGGCGCTGATTGGCGTGACCTTCCAGAAGAAAAGATAAAATTGTCTACTGGACAAGTTGTTGATTTGATACCATGGTGCTTGCCAAACACGGCTAAGCGGCACAATCAGTGGAAGGGACTGTTTGGCAGGTTGGATTGGCAAGGGAATTTCCCAACTTCCATTACTGACCCTCAGCCAATGGGGAAGGTTGGAATGTGCTTCCACCCTGACCAAGATAGGATTCTTACTGTTCGTGAATGTGCTCGGTCTCAAGGCTTCCCAGATAGCTATCAATTTGCTGGCAATATCATACACAAGCACCGGCAGATTGGTAATGCTGTGCCTCCTCCTCTGGCATCTGCATTGGGGAGAAAGCTCAAGGAAGCAGTGGACAGTAAGAGCTCCACTTAG
Protein Sequence
- >Glyma.04G187600
MGSASLLNPSQPGVKKNDKSKQKSVVSKTEEEVMFKDKQKKRSLSESSEQTAAMRKMPKRAAACKNLKEKSFLIYEKSCLIETEKDHIVEEESLAVRMTAGQDNGCPNRRITEFILHDETGKSQPLEVLEVDDLFITGLVLPLEASSGKKKEKGVKCEGFGRIESWDISGYEDGSPVIWLSTEVADYDCQKPAASYKKVYDLFLEKARACVEVYKKLAKSSGGDPDISLDELLAGMVRSMSGSKCFSGAASIKDFVISQGEFIYKQLVGLDMTSKANDRMFADIPALIALRDESKKQVHAQVMPSNGSLRIDSGVGDEENKNQMDSVASVNEEDEDAKLARLLQEEEYWQSMNQKKNSRSASASNKYYIKINEDEIANDYPLPVYYKTSLQETDEFIVFDNDYDIYDTQDLPRSMLHNWSLYNSDARLVSLELLPMKPCSDIDVAIFGSGIMTSDDGSGFHLDTEAGKSSSVGSGAQVADGMPIYLSAIKEWMIEFGSSMIFISIRTDLAWYRLGKPAKQYAPWYDTVLKTARLAISIITLLKEQSRVSRLSFGDVIRKVSEFDKKDGSYISSDPLTVERYVVVHGQIILQLFAEFPDDKIRKSAFVTGLTNKMEERHHTKWLVKKKKVVPRSEPNLNPRAAVGPVVSKRKAMQATTTRLINRIWGEYYSNHLPEDAKEGIASELKDEDEVEEQEENEDDDNEETILLEGTPKAHSASKQTKKFSAETEIRWEGEPEGKTSSGYPVYKQAIIRGEVISVGRSVLVEVDETDEFPDIYYVEYMFESKIGRKMFHGRMMQRGCQTVLGNAANEREVFLTNECRDLGLHDVNQTVVVNIQNRPWGHQHRKDNIIADRVDRAQAEERKKKGLPTEYYCKSLYWPERGAFFSLPLDTLGLGSGVCPSCKIQDAEKEKDVFKVNSSKSGFLLKGTEYSLNDYIYVSPFEFEEMIEQGTHKSGRNVGLKAYVVCQVLEIVVKKEIKEAEIKSTQVKIRRFFRPEDVSNEKAYCSDIQEVYYSDETHIISVESIEGKCQVRKKNDIPECSALGRMFQNVFFCELLYDPATGSLKKLPAHVKVKYSSGQTSDAAARKRKGKCIEGDDVLESPNEGKTLNEKRLATLDIFAGCGGLSEGLQQSGVSSTKWAIEYEEPAGDAFKANHPEALVFINNCNVILRAVMEKCGDTDDCISTSEAAELAAKLDEKEISSLPMPGQVDFINGGPPCQGFSGMNRFNQSSWSKVQCEMILAFLSFADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAASPEDVLPEWPEPMHVFSAPELKITLSENVQYAAVRSTANGAPLRSITVQDTIGDLPAVGNGASKGNMEYQNDPVSWFQKKIRGDMVVLTDHISKEMNELNLIRCQKIPKRPGADWRDLPEEKIKLSTGQVVDLIPWCLPNTAKRHNQWKGLFGRLDWQGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFAGNIIHKHRQIGNAVPPPLASALGRKLKEAVDSKSST*