Information report for Glyma.03G262100
Gene Details
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Functional Annotation
- Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs.
Homologous
- Actinidia chinensis: CEY00_Acc15976
- Citrullus lanatus: Cla97C05G079940
- Gossypium hirsutum: Gohir.D07G138400, Gohir.A07G133700
- Juglans regia: Jr07_10040
- Manihot esculenta: MANES_05G015200
- Medicago truncatula: Medtr7g118350
- Populus trichocarpa: POPTR_002G181400v3
- Prunus avium: Pav_sc0001046.1_g510.1.mk
- Prunus persica: PRUPE_2G200900
- Rosa chinensis: RchiOBHm_Chr1g0361361
- Sesamum indicum: SIN_1002242
- Vitis vinifera: VIT_15s0048g02380
Gene Resources
- Pfam: PF00271 PF02170 PF04851 PF00636
- UniProt: A0A445LHI5
- EMBL: QZWG01000003
- InterPro: IPR000999 , IPR001650 , IPR003100 , IPR005034 , IPR011545 , IPR014001 , IPR014720 , IPR027417 , IPR036085 , IPR036389 , IPR038248
- PANTHER: PTHR14950 , PTHR14950:SF37
- SUPFAM: SSF101690 , SSF52540 , SSF54768 , SSF69065
- PROSITE: PS00517 , PS50137 , PS50142 , PS50821 , PS51192 , PS51194 , PS51327
- Gene3D: 1.10.1520.10 , 2.170.260.10 , 3.30.160.20 , 3.30.160.380 , 3.40.50.300
- CDD: cd00593 , cd02844 , cd18034 , cd18802 , cd19869
Sequences
CDS Sequence
- >Glyma.03G262100
ATGGAGGATGGGAGCAGGGTTCCGGCGGGGGATGACCCCTCTTACTGGCTGGATGCGTGTGAGGACATATCGTGCGATGATTTCATTGATTTTGATGTCTCTTCCATCGTCTCTGACCAGCCCGACAATCCTTCCAATCAGGACTTCTTCGGTGGCATTGATAAGATTTTGGACAGCATCAAGAACGGTGCTGGTCTCCCTCTCAATCATGCTGTTGAACCACCCAATAATAATGGCACTGCAGCAGGAGAAGTGTGCTTGCCTTCCAATGCCACTCTTGAGGATGGTGCTCCTGCTGCTGATGCTTTTGACCATTCTGGTGGCGTTGCTCGGAGTAACGGCTCCAGTAAGCTGTCTAATGGGAACGAAACAGGAGTTTTGGTTAATTATTCTCAGGAAAGAGGGGCACCCCCTCTGAATGGAGGCCACGATTTTGATGGTGAAGAAAGGTGCAGCAAAAGGGCTTGGCTTGGCGGCTACAATAATGAGAGGCCTTATTATTGTAGAGGGAATTATCAAGGCAAGGAGAGGGAGAGGTGTTTTAATAATAATAACAGGAAGAGGCCACGGGGTGATAGGGATGAAATTGACAGGAAAGATAAGGATGGTGGTGGAAGGAAAAGAGAACATTATGGTGCTGTTGCCAGGAGGGATGTTAGAGATAGGGATTGTAGGGATAGAGAAACTAGGGGTTACTGGGAGAGGGATAAGTCAGGTTCCACTGATATGATCTTTCGCACTGGCGCTTGGGAACCTGATCATAATCGAGATGACAAAATGGTGATTGACACCAAACTGGAGAACTATGGAAAGCTTGATAAGAAGTCCGAGGATGCTATTGAGAGGGTTCCTGAGGAAAAAGCTAGACAGTATCAGTTAGATGTTCTTGAGCAATCAAAAAGGAAAAATACCATAGCTTTTCTTGAAACTGGAGCAGGGAAAACCTTAATTGCTGTTCTTCTCATTAAAAGTATACAAGATAGTTTGCAGAAGCAAAATAAGAAAATGCTTGCAGTATTTTTAGTTCCAAAAGTTCCACTTGTTTACCAGCAAGCTGAAGTAATTCGTGAGCGGACTGGTTATCAAGTAGGCCACTATTGTGGAGAAATGGGGCAGGATTTCTGGGATGCTCGAAGGTGGCAGCGTGAATTTGACACCAAACATGTTTTAGTCATGACTGCCCAAATTCTTTTAAACATTTTGAGGCATAGCATAATAAAAATGGAAGCAATCAATCTCTTGATTCTGGATGAGTGCCACCATGCAGTGAAGAAACACCCATATTCACTGGTGATGTCCGAGTTCTACCATACAACACCCAAAGAGAACAGGCCATCTGTATTTGGAATGACTGCTTCTCCTGTTAACTTGAAGGGTGTCTCCAGCCAAGTAGATTGTGCAATAAAAATTCGTAATCTTGAAAGTAAGCTAGATTCTATAGTTTGCACCATTAAAGATCGGAAGGAGCTGGAGAAACATGTGCCGATGCCCTCTGAAGTTGTGGTGGAGTATGATAAAGCTGCCAGTTTATGTTATCTACACGAGCAGATAAAGCAGATGGAGGTTGAAGTTGAAGAAGCTGCAAAATATAGTTCAAGGAGAAGCAAATGGCAGTTTATGGGAGCTAGAGATGCTGGAGCTAAAGAAGAGCTGCGCCAAGTATATGGCGTTTCTGAAAGAACAGAAAGTGATGGAGCTGCAAACTTAATTCAGAAGTTGAGAGCTGTTAATTATGCACTTGGTGAACTGGGACAATGGTGCGCTTATAAGGTTGCACTATCCTTTTTAGCAGCTTTGCAAAATGATGAAAGGGCCAACTACCAGCTTGATGTCAAGTTTCAGGAAACTTATTTGAGTAAAGTTGTCTCGCTTCTGAAATGCCAACTGTCAGAGGGTGCAGCTTCTGACAAAAATGCTGGTATTGATGACTCAGAGAATGGTGCAGCTCAAAGTGGGTCTGAACATGAAGAGATGGAAGAAGGAGAGCTTCCAGACAGTCATGTTGTCTCTGGCGGGGAGCACGTGGATGTTATTATAGGAGCTGCTGTGGCTGATGGCAAGGTGACCCCCAAGGTGCAGGCACTAATCAAAATACTTCTCAAGTATCAGCATACAGAAGATTTCCGTGCAATCATCTTTGTTGAGCGTGTTGTGTCTGCATTAGTTCTGCCCAAGGTCTTTGCAGAGCTTCCATCACTTAGTTTTGTGAAGTGTGCAAGTTTGATTGGTCATAATAACAGTCAGGAAATGCGAACTTACCAAATGCAGGATACAATTGCCAAATTCCGTGATGGACGGGTCACATTGTTGGTTGCCACTAGTGTTGCTGAAGAAGGACTTGATATCCGTCAATGCAATGTTGTTATTCGCTTTGACCTTGCAAAGACTGTTCTGGCATATATTCAGTCCAGGGGACGTGCTAGAAAGCCTGGATCTGATTACATCCTGATGGTTGAGAGGGACAATTTGTCACATGAAGCATTCCTAAGGAATGCCAAGAACAGTGAGGAAACTTTGCGCAAAGAAGCAATAGAGAGAACAGACCTTAGTCATCTGAAGGACACTTCAAGATTGATTTCTGTTGACACCCGGCCCGGAACAGTTTACCAGGTGAAGTCAACCGGTGCAGTTGTGAGCCTAAATTCTGCTGTAGGTCTTATCCACTTTTACTGCTCTCAGTTACCTAGTGACAGATATTCAATTCTTCGCCCTGAGTTTATTATGGAGAGGCATGAAAAACCAGGAGGTCCCACGGAATATTCTTGCAAGCTTCAACTACCGTGTAATGCACCGTTTGAAAATCTTGAGGGTCCAATATGCAGTTCTATGCGTCTGGCACAACAGGCTGTTTGTCTGGCTGCTTGCAAGAAACTGCATGAGATGGGTGCATTCACTGACATGCTATTGCCTGATAAAGGAAGTGGGGGAGAAAGAGAAAAGGATGAACAAACTGATGAAGGAGATCCACTTCCAGGGACTGCTAGACATAGGGAGTTCTACCCTGAAGGTGTGGCTGACATACTGAAGGGAGAGTGGATCTTATCTGAAAAAGATGCTTGCAACAACTACAAATTACTTCATCTTTATATGTATGCCGTGAAGTGTGAAAATCTTGGCCATTCAAAGGATCCGTTCTTGACTCAAGTTTCAAATTTTGCAGTACTTTTTGGCAATGAGCTGGATGCAGAGGTGTTATCGATGTCAATGGATCTATTTATCGCTCGAACTGTGACTACAAAGGCATCTCTTGTCTTTAGTGGGTTGATAAATATCACTGAGAGTCAGCTGGCATCCCTGAAAAGCTTTCATGTAAGATTAATGAGCATTGTCTTGGATGTGGATGTTGAACCATCTACCACTCCTTGGGATCCTGCAAAGGCATATTTGTTTGTCCCAATGGTTGGCGATAAGTCCGTAGATCCTATGAACCAAATTGACTGGCATCTGGTTGAGACAATAATTGGAGCTGATGCATGGAAGAATCCCCTCCAGAAAGCTCGACCAGATGTTTACCTTGGTACTAATGAGAGAACATTAGGTGGAGACAGAAGGGAATATGGATTTGGGAAATTGCGTCATGGCATGGCTTTTGGGCAAAAATCACATCCTACCTATGGAATCAGAGGAGCTGTGGCCCAGTTTGATGTGGTGAAAGCTTCAGGATTGGTTCCTAACAGAGACGCCATGCAAACACAAAAGCACATCAATATGACTACCAATGGAAAATTAATGATGGCGGATATCTGTACTAATGCAGAGGATCTGGTTGGGAGAATTGTAACTGCTGCTCATTCAGGGAAGAGGTTTTATGTTGATTCAATATGCTATGACATGTCAGCAGAGAACTCTTTCCCTAGGAAAGAAGGTTATCTTGGTCCTCTGGAGTACAGTTCATATGCTGATTACTACAAGCAAAAGTATGGGGTTAATTTGATTTACAAGCAGCAACCTCTTATAAGAGGGCGTGGTGTATCATACTGCAAGAATCTTCTGTCTCCTCGATTTGAGCACAGTGAAGCTCATGAAGGTGAATCTGAAGAGATACATGACAAAACTTATTATGTTTTCCTTCCTCCTGAGCTATGCCTCGTACACCCACTGCCTGGATCACTTGTCCGTGGTGCCCAGAGGTTGCCTTCGATAATGAGGAGGGTTGAAAGTATGCTACTTGCAGTTCAGCTTAAGAATATGATAAATTATCCTGTCCTGGCTTCAAAGATCTTGGGAGCCTTGACTGCCGCCTCTTGCCAGGAGACATTCTGCTATGAAAGGGCAGAGCTTCTTGGAGATGCTTACCTGAAATGGGTTGTTAGTCGATTTCTTTTCCTAAAATATCCACAGAAACATGAAGGTCAACTTACTAGGATGAGACAACAAATGGTCAGTAACATGGTATTATATCAGTATGCATTAAGTAAAGGGCTTCAATCATATATTCAAGCAGATCGTTTTGCTCCATCCAGATGGGCAGCTCCTGGGGTGCTGCCTGTCTTTGATGAGGATACCAAGGATGGGGAGTCATCTTTGTTTGACCAGGAGCGATCCATTTCCAAGATCGAGAGGATGGATTGTCACACGAATGGATATGAGGATGAGATGGAAGATGGTGAGCTTGAGAGTGATTCAAGTTCTTACAGAGTTCTATCCAGTAAGACACTTGCAGATGTTGTGGAAGCACTGATTGGGGTATATTATGTGGAAGGTGGTAAGAATGCTGCCAACCACCTTATGAAATGGATTGGCATTCAAATAGAGTTTGATCCTGATACAATGGAGTGTACAAAAAAGCCATTTAATGTTCCTGACAGCATACTTAGGAGTGTTGATTTTGATGCTTTAGAAGGTGCTTTAAATATGAAGTTTAACGACAGGGGGCTGCTGGTAGAATCCATAACTCATGCCTCCCGGCCATCTTCAGGAGTATCCTGTTATCAGCGGTTGGAGTTTGTTGGCGATGCTGTCTTGGATCATCTTATTACCAGGCACTTGTTTTTCACTTACACAAATCTGCCACCGGGACGTCTGACTGACCTTCGGGCTGCTGCTGTAAACAATGAAAATTTTGCGCGTGTTGCAGTTAAGCACAACCTTCATGTGCATCTCAGACATGGATCCAGTGCCCTAGAAAAACAGATTAAAGAATTTGTGAAGGAAGTTCAAGTCGAATTGTCAAAGCCAGGTTTTAATTCCTTTGGTCTGGGAGACTGTAAAGCCCCCAAGGTCCTTGGTGACATTGTTGAATCTATTGCAGGTGCCATTTTTCTTGACAGTGGGAGGGACACTACTGTTGTTTGGAAGGTTTTTCAGCCTCTTTTGCATCCTATGGTTACCCCAGAGACTCTGCCGATGCATCCTGTGCGTGAGCTGCAAGAGCGATGCCAGCAGCAAGCTGAAGGCTTAGAGTATAAAGCAAGTCGTATTGGCAATTTGGCCACTGTTGAAGTATTCATTGATGGGGTCCAAGTAGGGGCTGCTCAAAATCCACAGAAAAAAATGGCGCAGAAATTAGCTGCAAGAAATGCCCTTGCTGCTTTGAAAGAGAAAGAGGTGGGAAAAACTCAGGAGAAGAATGATGAAAACGGGAAAAAGAATGGAAACCAGACATTTACTAGGCAAACATTGAATGATATATGTTTACGAAGAAATTGGCCTATGCCATTCTACAGGTGTGTGAATGAGGGTGGTCCAGCACATGCAAAGAGGTTTACATTTGCGGTGCGTGTCAATACTACTGATAGAGGATGGACGGATGAATGTGTTGGAGAGCCAATGCCAAGTGTCAAGAAGGCCAAAGACTCAGCTGCTGTTCTTCTCTTAGAACTACTGAACAAATTATACTCGTGA
Protein Sequence
- >Glyma.03G262100
MEDGSRVPAGDDPSYWLDACEDISCDDFIDFDVSSIVSDQPDNPSNQDFFGGIDKILDSIKNGAGLPLNHAVEPPNNNGTAAGEVCLPSNATLEDGAPAADAFDHSGGVARSNGSSKLSNGNETGVLVNYSQERGAPPLNGGHDFDGEERCSKRAWLGGYNNERPYYCRGNYQGKERERCFNNNNRKRPRGDRDEIDRKDKDGGGRKREHYGAVARRDVRDRDCRDRETRGYWERDKSGSTDMIFRTGAWEPDHNRDDKMVIDTKLENYGKLDKKSEDAIERVPEEKARQYQLDVLEQSKRKNTIAFLETGAGKTLIAVLLIKSIQDSLQKQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFDTKHVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTPKENRPSVFGMTASPVNLKGVSSQVDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEVVVEYDKAASLCYLHEQIKQMEVEVEEAAKYSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAVNYALGELGQWCAYKVALSFLAALQNDERANYQLDVKFQETYLSKVVSLLKCQLSEGAASDKNAGIDDSENGAAQSGSEHEEMEEGELPDSHVVSGGEHVDVIIGAAVADGKVTPKVQALIKILLKYQHTEDFRAIIFVERVVSALVLPKVFAELPSLSFVKCASLIGHNNSQEMRTYQMQDTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERDNLSHEAFLRNAKNSEETLRKEAIERTDLSHLKDTSRLISVDTRPGTVYQVKSTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFENLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEREKDEQTDEGDPLPGTARHREFYPEGVADILKGEWILSEKDACNNYKLLHLYMYAVKCENLGHSKDPFLTQVSNFAVLFGNELDAEVLSMSMDLFIARTVTTKASLVFSGLINITESQLASLKSFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPMVGDKSVDPMNQIDWHLVETIIGADAWKNPLQKARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRDAMQTQKHINMTTNGKLMMADICTNAEDLVGRIVTAAHSGKRFYVDSICYDMSAENSFPRKEGYLGPLEYSSYADYYKQKYGVNLIYKQQPLIRGRGVSYCKNLLSPRFEHSEAHEGESEEIHDKTYYVFLPPELCLVHPLPGSLVRGAQRLPSIMRRVESMLLAVQLKNMINYPVLASKILGALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGESSLFDQERSISKIERMDCHTNGYEDEMEDGELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIQIEFDPDTMECTKKPFNVPDSILRSVDFDALEGALNMKFNDRGLLVESITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTNLPPGRLTDLRAAAVNNENFARVAVKHNLHVHLRHGSSALEKQIKEFVKEVQVELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTTVVWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKASRIGNLATVEVFIDGVQVGAAQNPQKKMAQKLAARNALAALKEKEVGKTQEKNDENGKKNGNQTFTRQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVNTTDRGWTDECVGEPMPSVKKAKDSAAVLLLELLNKLYS*