Information report for gene-LSAT_4X6960
Gene Details
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Functional Annotation
- Encodes a protein with a methyl-CpG-binding domain. Has sequence similarity to human MBD proteins. Involved in the modification of the FLC chromatin acetylation state to affect FLC expression. Mutants show an early flowering, and enhanced shoot branching phenotypes.
Homologous
- Brassica napus: BnaC05G0560100ZS, BnaC01G0494500ZS, BnaA01G0420600ZS, BnaA01G0420700ZS
- Brassica oleracea: Bo5g155130, Bo1g158920
- Brassica rapa: Bra040518, Bra039117
- Daucus carota: DCAR_007093
- Vitis vinifera: VIT_01s0026g00150
Sequences
CDS Sequence
- >gene-LSAT_4X6960
ATGGAATGCAACAGAGAGAAGAGGTTGCGACGAACTGTATCCGCTACTAGTGGTGGCGATTTAGGGCTTGTGGACATGAATGTCTCTCCACCGCGTGAGGTTGAAGGTGATGACGCAGGGTTTTGGGTAAATTCGGAGTTAGCCTTCACAAACAGTGCCCCCAAAATGCAGGATACGTATTGCAATCCCTTCACTAACTTTACTTTAACTTCTTGCAACAACACTCATAGTCTTAGAGATGTTGCAAATGGATTTCCATGTGCAACCACTTCCTACAGTACAAGTACAATACAGACTGCGCGCATGAATCTTGATATTGCAACACAGAATGACAATTTAGCTTATTTGAAAGCACTTAAAGACTACATATCTGAACACAGAGGTGTATTGGAAGATGGTTGGTGTGTTAAATTTGAATACTCAGAGACTACTTGCAAAACCTCTCCTTTTTACTGTTCCCCAGATGGAATTAGATACGATTCCATGCCACAAGTTGCTCATCATCTTGGTTTGCTTTCAACTTCCAATTCCATTGACACAAAAAATGATAACAGAGTGGAGGGTGGATCAAGGTCACTCAGTAATGGTGGAAATGCAGTTGAACTTGTCCCAATGGAGAATGGTGGTTACCATGAATCAGATTATTCAGTATCGTTTCCACTTCAATTTGAAGACTTGTTTGTTATATCAGTTGGAAAAGTCAACCCAAGGCGTCCATTCCACAACACTCATCAAATCTGGCCAATTGGTTACAAATCCATGTGGCATGATAAGCTTACAGGCTCCATTTTTGTATGTAATGTTCTAGAAGGTGATGATTATGGCCCAATCTTTAGAGTAAATCGTCATCCATGCTCAAAGCAATCACTACCCAATGCTTCAACAGTAATCTACAAAAAGCCTAAATCAGATGAGAATGAGAATGAGAATGAGATAGCAAGTTCAGAAGCTCATGATGATACACCTTCTGATAATAGCTTCATCAATGGTGATGTTATTGGTGAATTCATGGTTGAAGGGAGATCCACATCATCTGCATGGAAGATGGTTTTGGAAACCCTAATTTGTGCATGCCATCATGCCTTTCAAGATTTGAGTGTTGTGAACTTTCATTGTAACCATAACGATAACAGGCAACAGTTTTATGGTTCATATGGTATTGATTCGTTAGACAAATTCAGTTGTTTGACTTTGACTAGTGGTTCTGTTGACCGCATCCCGGAATTGATTTTGACCACAGAGCAACTTGAAGTTTCTTGTATGGTGATACGGAGATGGTTGGAAATGGATAGATTTGGTTTGGATGCAGAGTTTGTACAAGAACTCATACAACAGCTTCCTGGAGTTGGTGCTTGTTCTGAATATAAATATTTGGATGCCAGATGTCAAAATTCGATTGCACGAACTGTTGGAAGTGGATTTTTTTCGGTTTTACATACACAGAGAATGATATCAGATAGTCTCACAGAAACCTGTAAAAGACTCAGCCCACCTGGCAATACAATTGCTTCTAACCTTCCTCCCTATTTAATTGGGGATGTTCTACAGGTCTATGAGTTCTGCCTGCAGTTTCATAAAGTTCTTGGACAAGATGCACCTCTCTCTAGACAAAATCTTGAAAAGGAGCTACTGGATCCATGGGTTGATACAGGCATGATGCAGAATAGTGTTACCTCATGTTCCAGAATTGCCCCTGATACAGGCATGATGCTCTCAAACTTTCATATGACAATGCTGAAGGTGCTAGTGGAAGATATACTATCAAAAGTTACAATATACGATCCATTTGGTGCCATGGAATCCAAGTCAAGAAAAGGCAGGAAGAAAAACATGGACATGACAGTTTCTAGCAAAAAGGGCAATCCTGGTATATTTCCTATTAATGAAATTACTTGGCCAGAGGTAGCCCGGAGATACATTTTGGTTCTGTTATCCATGGATGATAATTATGAAGCTCCCGATCTCACAAACCGTGAGTTTGATCAAGTTTTCCATTGCTTGAATGGTGATGGTGGCCCACTTTGTGGTTCTCTTACAGGAATGGCTGTAATCGAGGCCGATGCAATGATTCTAGCAGAGGCCTCGAAGAAAATATTTTCTTCTGTGAAGAGTAAAATTGGAGATTTCGTCATTGACAATGATCTTGATGTCAATGACTGTGTGAGGGAGACAAAAAGAATTGACAACAAATGTCCAGAGTGGATAAAGGTTCTAGAACCTATAAGAAGACAACCTACAAACGTGGGAGCAAGAATAAGAAACCGTGTTTTCAAATCATTAGAAAAAGATCCACCAGAATGGGCGAAAGAGATGCTGTTAAGATCCATAAGTAAAGATGTCTACAAGGGTAATGCATCGGGACCCACAAAGAAAATTGTTGTATCGGTTCTTGATAAAGTGAGAGATGAAACTCCATTGACCAAGAAGAAAGTCAAAGAAAGCCGAGTTGTGAGGACAGTATCTGATGTGATCATAAAAAGGTGTCGCATGGTGCTACGTGCTGTTGCTGCTGAAGATGAAAACAAAGCTTTTTTTGGTTTCATGAAACCAAATGAATTTGATGATGTTGTGACAGTTGCACGTCGTTTGGATTTTAGAACAATTGACCTCAGATTGGATGCAGGCTTCTATGATCATTCCCATCAATCTTTCATCGAGGATGTTCGCGAGGTTTGGGAAAACTTACGAATAACATACAGGAACAAACCCAAATACATCGACTCCATAGAAGCAATTTCAAGAAAGCTTGAAGAACTATACAAACAAGAGGTACTTACATTGGTGAGCAAAACCATGGATTATGGGAACAATCCGTTTGAAGAAACAAAAAAAGAGCTAAACATGATGATCATAGACACAATTTCAAGCACACTATTCATTGCACCATGGGAAGATGGGATTTGCAGAGTATGTGGAAAAGACGAAAATGACCATATTTTGCTTTTATGTGATCGATGTGATGCAGAGTATCATACTTACTGCTTAGATCCCCCTCTTCAAAGGGTTCCAAAAGCAAGTTGGTATTGCCCTCCATGCATTTCTTTCATTACAAGTCAAACCATGTCACGTGAAGATGATCATGATGGGCCCACAAAGAAGAAAAGTCAAAGAGAGTTTACTCGAATTGGTTTAGAGGAACTTGCGGATTTAGCAGATGCCATGGAGTCAATGGAGTATTGGGAACTTGGTGTTAAAGAGAGGGTTTTCCTTCTACAGTTCTTGTGTGATGAGTCTTTGAGTTCAACTGTGATTCAAAATCACATGAGTGCAGATGGTTGTTGCAATTTTCAAAAAAACTTTTTGGGCCGGGATTCAGATGGAAGACTTTATTGGGTTTTGGGTAGGCCCGAAAGGGTATTTATGTCCGGCCCACACAGTGTAGGTGAAGTGTGTGAAAGTTCTTCTTCTTCTTGTGCATGGGTTTGCTATGAATCAGATGGTGAAATTGAGGCTCTGCTTGAATGGCTGGAAGATGATGATGCAAAAGAGAAACAACTGAAAGAAAACATTAAGAAATGGCAAAGGAACAAATCAAGTGATTTAAATGATGATGATCACAGTGTTGGTCAAGTTGCACTTCAGTTGAGGTCGTCGGTTCATGCGAGGGCAGAATTGGAAAAGAAATTTGGGAAAATATTCCGGTGTGATTGCTTGGAATTAGTGGGACCTACTCGACACCATTGTTTTTCATGCCACTCTACATTTTCAACTAACGAGCCGGCTCATCAGTGTGAGGCCAAGGGTATAATTGGAAAAAACCCGTCTGAAGTTGATGGGGGTATAATCGGAAATAACCGCTTGTCTATCGCAACAGTAGCTGGGAAAGTTTATGAAATTCTTCAATTTCTTAAAATAATTTTACTGGATATTGAAGCTGCTCTTCCGGATGAAGCTTTTAGACCTTCAAGAAAAGACCCCAACAGGCTACGAATTTGGCGGGCGTTTTTGAAATCAGCTAAATCAATTTCTGAGATGGTTGAAGCAGCTATTATCTTAGAGGACATGATTAAAACAGAGTACTTAAGAAAGGAATGGAGGTATTGGTCATCACCTTCAGCTGCTGCTAAAATCTCCACCATTTCGGCTCTTGCCCTACAAATTTACGCCCTTGATGCCGCCATATTTTATGAGAAGCCACCACCTCTGCCGCCAGTGGACCTGCCGGAATCCCTAACGCCGGGGAATTTGGAGTCAAAGGAGGAAATTCCTACAAAGTCAAACTTGAAGAGCATCCGAAAGTCAGGCAGCTTAACAATAGAATTAGTAATGCCAGGGAATTCCGAGTCAAAGGAAGAAACCCCCAAAAAGTCAAAGTTGAAAAGAAGCCCAACAATGGAATTAGTAATGCCGATGAATTCTGAGTCAAAGGAAGAAACTCCCAAAAAGTCAAAGATGAAGGACAACCGGAAGTCAAGCAGCCCAACAATGGAATTAGTAATGCCAGGGAATTCTGAGTCAAAGGAAGAAACTCCCAAAAAGTCAAAGATGAAGAGCAACTGGAAGTCAAGCAGCTCAACAATGGTGACAATATTAGATGAGTCAGAACCCATCAAGAATTTTATACCCAAAAGCAGATCAAGGAAGGAGGAGCTTGATGTTTTTAACTTTAGTGATTAA
Protein Sequence
- >gene-LSAT_4X6960
MECNREKRLRRTVSATSGGDLGLVDMNVSPPREVEGDDAGFWVNSELAFTNSAPKMQDTYCNPFTNFTLTSCNNTHSLRDVANGFPCATTSYSTSTIQTARMNLDIATQNDNLAYLKALKDYISEHRGVLEDGWCVKFEYSETTCKTSPFYCSPDGIRYDSMPQVAHHLGLLSTSNSIDTKNDNRVEGGSRSLSNGGNAVELVPMENGGYHESDYSVSFPLQFEDLFVISVGKVNPRRPFHNTHQIWPIGYKSMWHDKLTGSIFVCNVLEGDDYGPIFRVNRHPCSKQSLPNASTVIYKKPKSDENENENEIASSEAHDDTPSDNSFINGDVIGEFMVEGRSTSSAWKMVLETLICACHHAFQDLSVVNFHCNHNDNRQQFYGSYGIDSLDKFSCLTLTSGSVDRIPELILTTEQLEVSCMVIRRWLEMDRFGLDAEFVQELIQQLPGVGACSEYKYLDARCQNSIARTVGSGFFSVLHTQRMISDSLTETCKRLSPPGNTIASNLPPYLIGDVLQVYEFCLQFHKVLGQDAPLSRQNLEKELLDPWVDTGMMQNSVTSCSRIAPDTGMMLSNFHMTMLKVLVEDILSKVTIYDPFGAMESKSRKGRKKNMDMTVSSKKGNPGIFPINEITWPEVARRYILVLLSMDDNYEAPDLTNREFDQVFHCLNGDGGPLCGSLTGMAVIEADAMILAEASKKIFSSVKSKIGDFVIDNDLDVNDCVRETKRIDNKCPEWIKVLEPIRRQPTNVGARIRNRVFKSLEKDPPEWAKEMLLRSISKDVYKGNASGPTKKIVVSVLDKVRDETPLTKKKVKESRVVRTVSDVIIKRCRMVLRAVAAEDENKAFFGFMKPNEFDDVVTVARRLDFRTIDLRLDAGFYDHSHQSFIEDVREVWENLRITYRNKPKYIDSIEAISRKLEELYKQEVLTLVSKTMDYGNNPFEETKKELNMMIIDTISSTLFIAPWEDGICRVCGKDENDHILLLCDRCDAEYHTYCLDPPLQRVPKASWYCPPCISFITSQTMSREDDHDGPTKKKSQREFTRIGLEELADLADAMESMEYWELGVKERVFLLQFLCDESLSSTVIQNHMSADGCCNFQKNFLGRDSDGRLYWVLGRPERVFMSGPHSVGEVCESSSSSCAWVCYESDGEIEALLEWLEDDDAKEKQLKENIKKWQRNKSSDLNDDDHSVGQVALQLRSSVHARAELEKKFGKIFRCDCLELVGPTRHHCFSCHSTFSTNEPAHQCEAKGIIGKNPSEVDGGIIGNNRLSIATVAGKVYEILQFLKIILLDIEAALPDEAFRPSRKDPNRLRIWRAFLKSAKSISEMVEAAIILEDMIKTEYLRKEWRYWSSPSAAAKISTISALALQIYALDAAIFYEKPPPLPPVDLPESLTPGNLESKEEIPTKSNLKSIRKSGSLTIELVMPGNSESKEETPKKSKLKRSPTMELVMPMNSESKEETPKKSKMKDNRKSSSPTMELVMPGNSESKEETPKKSKMKSNWKSSSSTMVTILDESEPIKNFIPKSRSRKEELDVFNFSD