Information report for g26605
Gene Details
Functional Annotation
- Encodes SERRATED LEAVES AND EARLY FLOWERING (SEF), an Arabidopsis homolog of the yeast SWC6 protein, a conserved subunit of the SWR1/SRCAP complex. SEF loss-of-function mutants have a pleiotropic phenotype characterized by serrated leaves, frequent absence of inflorescence internodes, bushy aspect, and flowers with altered number and size of organs. sef plants flower earlier than wild-type plants both under inductive and non-inductive photoperiods. SEF, ARP6 and PIE1 might form a molecular complex in Arabidopsis related to the SWR1/SRCAP complex identified in other eukaryotes.
Homologous
- Brassica napus: BnaC09G0417300ZS, BnaC03G0122900ZS
- Brassica oleracea: Bo9g135100, Bo3g018710
- Brassica rapa: Bra002649, Bra006766
- Citrullus lanatus: Cla97C02G045250
- Glycine max: Glyma.18G057300, Glyma.11G164100
- Gossypium hirsutum: Gohir.D03G142900, Gohir.A03G025600
- Medicago truncatula: Medtr3g465690
- Rosa chinensis: RchiOBHm_Chr5g0071621
Gene Resources
- Pfam: PF04438
Sequences
gDNA Sequence
- >g26605
GAAATCTTATTATTTTACTTTTTCAAATTCTTCTCTTGAAATCTCACTAAGAATGGAAATTATGGAAGCAAACACTTTATGCTCAACCTTAACAATCTCCTTAGCATTCTTACTCATTCTACACAGACAAACTTTTATTGGCAACAAGGAAAGGCTTAACCTTCTAATGGTAATGTGCTGCATAGTGATAGCGTACCTAGTTAACAACAAAACCCTTCATGTTCCTGAAGTCTGCACGCCTTTCTCTGTCCAACCTCTCAACCCCAGATCAGTTGTTTTCCTGCAGTGATAGAAATTTACCCAGAGCACAACCAAAAAAATGCATATCATGTTGGTTACATCAGCACAAGTTGTGATATGCGCAGGGTTTTATTACTGAATACCTTGACCCGCTCATACTCTGTGATGGCAGTGATCTAGATGGTTTCTTGTACCTCTTCTATTTTCCAGATCCTTGATTTGTCACCGCCAAATACCTTTGATGATGCAGCCTCTGCAAATGCGCCTTGGACAGCCATCATCATGTCAAGGTACTCATGGAGTCTGTCCTGAAATGAACAATTCAAATCAAAGAACAGCTCTTAGGGAAGCTTACAGTCCAGCACAATCTCCATGTATAAGCCGACAGTTCACTAGTCTATAATGAGGATGCACGCTAAGCATGAGGAGCTTTTAGAAATCCTGAAGTCAATTGCTTAAATCAAATTAATCATTTATTTTCAGCTGAGGAAAAGAAAACAACATTTCATTTGATTCAGAGTAATGATGCAACTGTATGTTTTAGTAGTTCAATAGATATTTACCAAATGTTTGACAGTCTGGGAATTCAACTCTATAAAATCTGCTTGCTTTTACAGCCGCAGTGGCTAAATTCTTCATTTCATTAGCACGAGTTCTTTGGGCGTTGGAAACAGCTTCTTCGTTCTCCAACTTAGTCAGCTTAATAAAAATGCTAATCCCAGTTCATGTCTTGATGTGCCTTCGGGATTCTGTCTACAGAAGAATCCACAAAAAGGTTTGTTCCAAGCAGTATACTATGTACTAACAGAATGATACATAATTCAACTAACAAGGATGAAATTTTACCTGTTGTGAGGCATTGATAATTTGTTGCTCAACATCATGCATCTTCTCCATCTTTTCCAAAAAATTCTTTATCTTCTTTTACAACTGGTGGTTTCCTCAGCTCCTTGAATAATCTCAGCATATCCATACCTACTCTGGCAGGCTGAACTACCTCATGCACTGGCACGGCTCCGCCGTCACCAAACAACTGTTTCGGAAGCTTCACCGCGCCATCCAACATCCTAGAGGCCATTAGTGCCCATTGGTATTGGCAACTTCCCTTGCATCTGGAGAAACACTTTCAACTCGTCACTGTTCCTAATAACCGGGTGTACACATAGCCTGCGCAAGTATTTCTCCAATGCAACTCTTCTCTGCTCCACAAACTCTTGTTTCTGTCAACTCTGAAAATAGATGGAGACGCAACAGGAGGACCAGGACAGGTTCTTAGGGTTCTAGAGAGTTTCATTGCATCCAGCGGAGAATCAGAGGTTGGCAATCACATCTTTGAAGCACAGAAATCGCGGAACACAGCAGATACAGCACGTAAAACAGTCATGGTGCAACAGAGAGTCATCCGTGAGTTCTCCAGATCTGTAAATCTCAAACAAAGCTACTGGAAATACTCAAGCAACAAATGTCCCATGTCTTATCTTTAATCATAATAACACTTCAGAGAAAGATAGCTGCTTTTCTTGGCTATTTCATTTTGAGAACAATTTCATGACAGGAACATGGAAATTGATTGATTGATGATGTTTCAAATACATTATGAAAACTATGTTACATATGTTTTCACTCTTTCCTACGCAACAAATTTCTGACAACGAGTATCCTTGTGAATGTTTTGACAACGAATAGAACAAAACCTCATCCCACATAAACAACAATTGTAGCCTGCAATGTAACCACAAACTGAGCAGAAATGGCGACGAGAAGACGAACTCGGAGGTCCAACAGCTGCTTTCAAGTAAGTCGGTACATGCGCAGGTAAAGATTCCAAATTTGCCTAAAACAAATGATTCTTAGAACCAAAATACTAATAACTGAGCTTAGCTGCAAATGAGTTAGTTAGTTACCTCTTGCAACAGCTCAAGGAAGGATTTAGGAGCTCTACGAGCTTCTAAAGCCTTCGCTTGTCGAGTTTTACGCTTTGATCCTTTGTGTTGCTTCTTCTGTACGTAACCTACCACCCCAAAAAACAGAGATTAAACTAAAACTACAGATTCACACAGAGAGATATCTTCAAATGTGAAAGATTGTTCACCAAGATCATCGTCTTCATCAAGAGAAGCTTCGTCATCATCGTTCATATCTATCACTTCAACAGCACCATTATCGTTCTCTAAAGCCTCTAGCCGAGCTATAGCAGCCTAGAATTAACCATGGTAAATAGTTTTTACCGAAATAAAAAAAGTGAATCCGAAATCAACAATTTTACCTGTGTTCGATTGTCATTGCTTGTAAGAGCCGCCGCCATCTTCGTAGCGACCTTGCGAGTCCGATTTGATACTCGACGGTTCGACATTTCTTCCTCCATCCCGGAAAATGTTTAGATCGCCGGCGACGTTGGAAGCGCAGCGGCGGATTTCAGAATCGACGAGACGACGAC
CDS Sequence
- >g26605
ATGGAGGAAGAAATGTCGAACCGTCGAGTATCAAATCGGACTCGCAAGGTCGCTACGAAGATGGCGGCGGCTCTTACAAGCAATGACAATCGAACACAGGCTGCTATAGCTCGGCTAGAGGCTTTAGAGAACGATAATGGTGCTGTTGAAGTGATAGATATGAACGATGATGACGAAGCTTCTCTTGATGAAGACGATGATCTTGGTTACGTACAGAAGAAGCAACACAAAGGATCAAAGCGTAAAACTCGACAAGCGAAGGCTTTAGAAGCTCGTAGAGCTCCTAAATCCTTCCTTGAGCTGTTGCAAGAGGCAAATTTGGAATCTTTACCTGCGCATGTACCGACTTACTTGAAAGCAGCTGTTGGACCTCCGAGTTCGTCTTCTCGTCGCCATTTCTGCTCAGTTTGTGGTTACATTGCAGGCTACAATTGTTGTTTATGTGGGATGAGATGCAAGGGAAGTTGCCAATACCAATGGGCACTAATGGCCTCTAGGATGTTGGATGGCGCGGTGAAGCTTCCGAAACAGTTGTTTGGTGACGGCGGAGCCGTGCCAGTGCATGAGGTAGTTCAGCCTGCCAGAGTAGGTATGGATATGCTGAGATTATTCAAGGAGCTGAGGAAACCACCAGTTGTAAAAGAAGATAAAGAATTTTTTGGAAAAGATGGAGAAGATGCATGA
Protein Sequence
- >g26605
MEEEMSNRRVSNRTRKVATKMAAALTSNDNRTQAAIARLEALENDNGAVEVIDMNDDDEASLDEDDDLGYVQKKQHKGSKRKTRQAKALEARRAPKSFLELLQEANLESLPAHVPTYLKAAVGPPSSSSRRHFCSVCGYIAGYNCCLCGMRCKGSCQYQWALMASRMLDGAVKLPKQLFGDGGAVPVHEVVQPARVGMDMLRLFKELRKPPVVKEDKEFFGKDGEDA