Information report for g18761
Gene Details
Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Brassica napus: BnaC09G0167200ZS, BnaA09G0152900ZS
- Brassica oleracea: Bo9g036780
- Brassica rapa: Bra027014
- Glycine max: Glyma.09G185800
- Gossypium hirsutum: Gohir.D05G183500, Gohir.A05G180500
- Juglans regia: Jr11_19040
- Manihot esculenta: MANES_11G098200
- Populus trichocarpa: POPTR_002G013100v3
- Prunus avium: Pav_sc0000367.1_g050.1.mk
- Prunus persica: PRUPE_1G356300
- Rosa chinensis: RchiOBHm_Chr6g0304051
Sequences
gDNA Sequence
- >g18761
TTACTATCACTTACCATTCTCGTAGATTCAGAAAGCAAAGTCTTCTCTTTTTCTTGTGTGAAAAAAACGAGAGAGAAAGGAAAGCTTCATCCAAAGCTTTCTCGTAGTCAAACTCTGCTTTAAGGTTGGTAAGTGTTACTAGATGTTTCTCTATTTACTATGTTTTTTTTTTTGTCTTTGTTAAATAATCATGTTCTCTTCTTCTCACTAGTCACTAAAGTATCGTCAGTTTCAAGTTATACGCATAACAGTGTTTAATGCTGTCTAAAATCATCTCTTCTCTGTTTTGCAGGTTCTCTCGGTAAGGAAATTACCAGAAGTCTCAAGGTTTTATGAAACAGAGAAGAACCAGAGGAGGATTCAGACTCTGCTTTTAAGTTTGGTAAGAAGCTAATGTTTCTTGTTTGAGAAACCATCTATCTTTGAATCATCGTTATCTAAGGTTATATTTGTAGACTGAAACATCTTGATTTTGAGAACTGAGCTCATAATGAGAAAGAGAGAGATGTTGGTAGTTTCCTGTCGTTTTGTTGCAAATCATCTCATCCTTGCGACAAATTTCTGACATCTTAAGACAATTTCAGCAGGTAGAGAAAGAAGAACTAATGACATGTCAAAGTCACGACAAACGATCCACGGCGACCGTTGGCGGCGAAACCTTACACTTGGCGGAGGATCTTCTCGTGGACTAATACTCCATGATCATCGCCTTTATTCTCGGCATATTCAGCGTAATGTTCAAGGTACTCTTTTTTTTTTTTTTTTATATTCTCGGCATATCTCGCTTCTTCTGATTATTGCTCTGTTAAAAAGCCAGTATCATCATATCGTAAACTCTTTTTGTTTTAATGCTTGAGATTTGCTGAGTTAAGTTGTCAGATTTTATATGTTAACTCTCTGATCCATCAACTACTCGAACTTTTATATGTTAGCTCGTGTTCGTTCAGTTTTTCTGATTTTTCAACATTGCATTTCCGAACTTGCTACTAATTATTGAATGCTTGTTTTATTAAAATGTTCCCCAACTTCTCAAGGCTTGCAAAACTGTGATTGTATCATATTTACGCTAGCTTTTCCGACAGACCAAAATTATTGTTTTATTATGGGAATATTATTTTGACCCGGTTCAGGCAATTGTTGCAAAAAATGATCAAACCTCTGTACAAGTTCTGTTACAATACTATAAAAGAAAGAAAGATTCTTGCTTTGACTACTATATCCCCATTGGTAAGAGTGATGAAATAATGACAGAAAAATTCACAAAATTAGCAGAAATAATGATCTAGTGGCAAGGAAGAATTGAGAAAAAGTTGGAAGGATTGTTGAACTTTGGAAGCAATGGATTCTAGCCAATTGATCTTCTGATCAATTCATAGATCCTTTCGATTCCATTAGTAATGAGGATTCGGAATATCACTATCACACATTGATCAATCAAAGAGAGATTCAACAACTAAAAGAAAGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCCATGTTTGAATTGAAATTGAGATACTGATGCAAGCTCTTCTCTTCTGAATCGGATAGATTCATATCTGAAAGAGTTTGACAATACGTTCTTTCAAAATTGACTCTTTGTCCCTCTATTAGAGGTGTTCCTGGAACTAACTCCACCTTGGAAGCAATTCAATTCAATTCACACGATCAAAAAAAAAATTATGCTGTCATATTTTAGTAATATATAAACTATACCCACTTATTTTTGTATATTATGAAATTTCACTTGTATTCTTTTAAGCGAAAACACAAGACTCAAATTCTGCATTTTTTGTGTTTTATTAAAAAAAAATCTTGATTTATAAATTTTTTGCATAAGCGCATAAAAAAAAAACCTATTCCAATCTTCCTATGCAAACAAATAACAAACCGAACCTACAAGTAAATGGGCTGGGAAAGACCCATACATTTTGGGCCCATTATCCAAACGTTGCCGTATACCTTCCTTTTTTAGCTAAGAAAAGAAGAACTACACTTTGGTAGGCTCGTCACTCACATCATCACACAGAGAGCAAGAGGCATGTCAACAGAGACCAAAGAAACCCGACCCGAAGACCCGGAAACCCATTCTAATTTGGATTTACCCGGTGAAGTACCTATCGGAAAGCTTATCGCTGACGACGTGAACGACGTCGTTTCTGATGCGTCGGCGACGGAGACTGACTTCTCACTCTCCCCGAGTCAATCGGAGCAAAATATTGAAGAAGACGGCCAAAACTCACTCGATGACCAATCGCCATTAACGGAGCTTCAACCTCAGCCTCTTCCTCCTCCTCCTCCTATCGAAACACGAATCTCAGAATCGCCCGGTGAAGAAGAATCTTCCGATCTGGTAACGGAGCAACAATCACAAAACCCTAATGCGGCGGAGCCTGGTCCTAGGGTAAGAAAACGACGCCGTAGGAAGCGTTTCTTCACTGAGATTAATGCGAACCCAGCTTTCTCCAGAAACCGCCGCACTAGCGTCGGCAAAGAGGTGGATTCAGAAGCGCTAATCGCAATGTCGGTAGGGTTTCCGGTTTATTCGCTCACGGAGGAAGAAATCGAAGCTAATGTGGTTTCGATCATCGGAGGTAAAGATCAGGCTAATTACATTGTTGTGAGGAATCACATTATCGCTCTGTGGCGATCTAATGTATCGAATTGGTTAACGCGAGATCATGCGCTTGAGTCTATACGTGCTGAACACAAAAACTTAGTGGATACAGCTTACAATTTCCTTCTTGAGCATGGTTATATTAACTTCGGGCTTGCTCCGGTTATTAAAGAGGCGAAATTGAGGTCGTTTGATGGCGTAGAGCCGCCTAATGTTGTGGTTGTAGGGGCGGGTTTAGCTGGTTTGGTGGCTGCTAGACAATTGTTGTCAATGGGGTTTAGGGTTTTGGTTCTTGAAGGTAGAGATAGACCGGGTGGGCGGGTTAAGACTCGTAAGATGAAAGGTGGTGATGGTGTTGAGGCAATGGCTGATGTTGGTGGAAGTGTTCTCACCGGTATTAATGGGAATCCGCTTGGGGTTTTGGCGAGGCAACTAGGTTTGCCTCTTCATAAGGTCAGAGATATTTGTCCTTTGTATCTTCCCAGTGGAGAGCTTGTTGATGCTGGTGTTGATTCTAAGATTGAGGCATCGTTTAATAAGTTGTTGGACAGAGTTTGTAAGCTTAGACAGTCGATGATAGAGGAGAATAAATCAGTAGATGTGCCTTTGGGAGAAGCGCTTGAAACATTTCGATTGGTTTATGGGGTTGCTGAGGATCAGCAAGAGAGAATGCTCTTAGATTGGCATTTAGCAAACTTGGAATATGCAAATGCTACATTGTTGGGGAATCTGTCAATGGCGTATTGGGATCAAGATGATCCATATGAGATGGGCGGTGACCATTGTTTTATCCCAGGTGGGAACGAAATATTTGTACATGCGTTAGCGGAAAATCTTCCGATTTTTTACGGGAATACAGTTGAGAGCATCAGATATGGAAGCAACGGGGTTCTTGTTTACGCAGGAGACAAAGAATTCCACTGCGATATGGCTCTTTGCACGGTTCCGTTAGGTGTTCTGAAGAAAGGTGCGATCGAGTTTTATCCCGAGCTTCCTGAGAAGAAGAAAGAAGCGATTCAGAGACTCGGATATGGATTGTTGAACAAAGTGGCGATGTTGTTTCCGTATAACTTCTGGGGCGAAGAGATTGATACTTTTGGGCGATTAACCGAAGATTCGTCCACTAGAGGAGAATTCTTCTTGTTCTACAGCTATTCTTCTGTTTCCGGTGGTCCATTACTTGTAGCACTTGTAGCTGGTGACGCTGCAGAAAGATTCGAGTCATTGTCGCCTACTGATTCCGTTAAACGGGTCTTGCAGATACTACGCGGAATATATCACCCGAAAGGAATTGTTGTTCCTGATCCGGTTCAAGCACTCTGTTCCAGATGGGGCCAAGACAAGTTTTCATACGGTTCTTACTCATATGTTGCGGTCGGATCATCAGGAGATGATTACGACATTTTAGCTGAGAGTGTCGGTGACGGAAGAGTGTTCTTTGCAGGTGAAGCTACTAACAGACAATATCCAGCAACAATGCACGGAGCCTTCTTAAGTGGAATGAGAGAAGCAGCAAACATACTTAGAGTTGCTAGAAGAAGAGCATCATCTTCGGCTTCAAATCCTAACCAGACCTGCATCGACAAAGAAGAAGAGGTCGACGAAGAAGAAGACAGCTGTTTGGATCAGTTATTCGAGACACCCGATCTGTCATTCGGGAATTTCTCGGTTTTGTTTACTCCAAATTCGGATGAACCTGAATCCATGTCATTGTTGAGAGTTAGGATCCAAATGGAGAAACCTGAATCGGGTCTTTGGCTTTACGGTTTAGTGACAAGAAGGCAAGCTATTGAGCTTGGGGAAATGGAGGGAGATGAGTTGAGAAATGAATACTTGCGTGAGAAGTTAGGTTTTGTACTCGTCGAAAGGAAGAGTTTATCTCAAGAAGGAGAATCGATGATCTCTTCACTCAAAGCTGCGAGATTGAATCGACAGATCTTTGATTAGTACTAAAATAGATTTAGATGGAATTG
CDS Sequence
- >g18761
ATGTCAACAGAGACCAAAGAAACCCGACCCGAAGACCCGGAAACCCATTCTAATTTGGATTTACCCGGTGAAGTACCTATCGGAAAGCTTATCGCTGACGACGTGAACGACGTCGTTTCTGATGCGTCGGCGACGGAGACTGACTTCTCACTCTCCCCGAGTCAATCGGAGCAAAATATTGAAGAAGACGGCCAAAACTCACTCGATGACCAATCGCCATTAACGGAGCTTCAACCTCAGCCTCTTCCTCCTCCTCCTCCTATCGAAACACGAATCTCAGAATCGCCCGGTGAAGAAGAATCTTCCGATCTGGTAACGGAGCAACAATCACAAAACCCTAATGCGGCGGAGCCTGGTCCTAGGGTAAGAAAACGACGCCGTAGGAAGCGTTTCTTCACTGAGATTAATGCGAACCCAGCTTTCTCCAGAAACCGCCGCACTAGCGTCGGCAAAGAGGTGGATTCAGAAGCGCTAATCGCAATGTCGGTAGGGTTTCCGGTTTATTCGCTCACGGAGGAAGAAATCGAAGCTAATGTGGTTTCGATCATCGGAGGTAAAGATCAGGCTAATTACATTGTTGTGAGGAATCACATTATCGCTCTGTGGCGATCTAATGTATCGAATTGGTTAACGCGAGATCATGCGCTTGAGTCTATACGTGCTGAACACAAAAACTTAGTGGATACAGCTTACAATTTCCTTCTTGAGCATGGTTATATTAACTTCGGGCTTGCTCCGGTTATTAAAGAGGCGAAATTGAGGTCGTTTGATGGCGTAGAGCCGCCTAATGTTGTGGTTGTAGGGGCGGGTTTAGCTGGTTTGGTGGCTGCTAGACAATTGTTGTCAATGGGGTTTAGGGTTTTGGTTCTTGAAGGTAGAGATAGACCGGGTGGGCGGGTTAAGACTCGTAAGATGAAAGGTGGTGATGGTGTTGAGGCAATGGCTGATGTTGGTGGAAGTGTTCTCACCGGTATTAATGGGAATCCGCTTGGGGTTTTGGCGAGGCAACTAGGTTTGCCTCTTCATAAGGTCAGAGATATTTGTCCTTTGTATCTTCCCAGTGGAGAGCTTGTTGATGCTGGTGTTGATTCTAAGATTGAGGCATCGTTTAATAAGTTGTTGGACAGAGTTTGTAAGCTTAGACAGTCGATGATAGAGGAGAATAAATCAGTAGATGTGCCTTTGGGAGAAGCGCTTGAAACATTTCGATTGGTTTATGGGGTTGCTGAGGATCAGCAAGAGAGAATGCTCTTAGATTGGCATTTAGCAAACTTGGAATATGCAAATGCTACATTGTTGGGGAATCTGTCAATGGCGTATTGGGATCAAGATGATCCATATGAGATGGGCGGTGACCATTGTTTTATCCCAGGTGGGAACGAAATATTTGTACATGCGTTAGCGGAAAATCTTCCGATTTTTTACGGGAATACAGTTGAGAGCATCAGATATGGAAGCAACGGGGTTCTTGTTTACGCAGGAGACAAAGAATTCCACTGCGATATGGCTCTTTGCACGGTTCCGTTAGGTGTTCTGAAGAAAGGTGCGATCGAGTTTTATCCCGAGCTTCCTGAGAAGAAGAAAGAAGCGATTCAGAGACTCGGATATGGATTGTTGAACAAAGTGGCGATGTTGTTTCCGTATAACTTCTGGGGCGAAGAGATTGATACTTTTGGGCGATTAACCGAAGATTCGTCCACTAGAGGAGAATTCTTCTTGTTCTACAGCTATTCTTCTGTTTCCGGTGGTCCATTACTTGTAGCACTTGTAGCTGGTGACGCTGCAGAAAGATTCGAGTCATTGTCGCCTACTGATTCCGTTAAACGGGTCTTGCAGATACTACGCGGAATATATCACCCGAAAGGAATTGTTGTTCCTGATCCGGTTCAAGCACTCTGTTCCAGATGGGGCCAAGACAAGTTTTCATACGGTTCTTACTCATATGTTGCGGTCGGATCATCAGGAGATGATTACGACATTTTAGCTGAGAGTGTCGGTGACGGAAGAGTGTTCTTTGCAGGTGAAGCTACTAACAGACAATATCCAGCAACAATGCACGGAGCCTTCTTAAGTGGAATGAGAGAAGCAGCAAACATACTTAGAGTTGCTAGAAGAAGAGCATCATCTTCGGCTTCAAATCCTAACCAGACCTGCATCGACAAAGAAGAAGAGGTCGACGAAGAAGAAGACAGCTGTTTGGATCAGTTATTCGAGACACCCGATCTGTCATTCGGGAATTTCTCGGTTTTGTTTACTCCAAATTCGGATGAACCTGAATCCATGTCATTGTTGAGAGTTAGGATCCAAATGGAGAAACCTGAATCGGGTCTTTGGCTTTACGGTTTAGTGACAAGAAGGCAAGCTATTGAGCTTGGGGAAATGGAGGGAGATGAGTTGAGAAATGAATACTTGCGTGAGAAGTTAGGTTTTGTACTCGTCGAAAGGAAGAGTTTATCTCAAGAAGGAGAATCGATGATCTCTTCACTCAAAGCTGCGAGATTGAATCGACAGATCTTTGATTAG
Protein Sequence
- >g18761
MSTETKETRPEDPETHSNLDLPGEVPIGKLIADDVNDVVSDASATETDFSLSPSQSEQNIEEDGQNSLDDQSPLTELQPQPLPPPPPIETRISESPGEEESSDLVTEQQSQNPNAAEPGPRVRKRRRRKRFFTEINANPAFSRNRRTSVGKEVDSEALIAMSVGFPVYSLTEEEIEANVVSIIGGKDQANYIVVRNHIIALWRSNVSNWLTRDHALESIRAEHKNLVDTAYNFLLEHGYINFGLAPVIKEAKLRSFDGVEPPNVVVVGAGLAGLVAARQLLSMGFRVLVLEGRDRPGGRVKTRKMKGGDGVEAMADVGGSVLTGINGNPLGVLARQLGLPLHKVRDICPLYLPSGELVDAGVDSKIEASFNKLLDRVCKLRQSMIEENKSVDVPLGEALETFRLVYGVAEDQQERMLLDWHLANLEYANATLLGNLSMAYWDQDDPYEMGGDHCFIPGGNEIFVHALAENLPIFYGNTVESIRYGSNGVLVYAGDKEFHCDMALCTVPLGVLKKGAIEFYPELPEKKKEAIQRLGYGLLNKVAMLFPYNFWGEEIDTFGRLTEDSSTRGEFFLFYSYSSVSGGPLLVALVAGDAAERFESLSPTDSVKRVLQILRGIYHPKGIVVPDPVQALCSRWGQDKFSYGSYSYVAVGSSGDDYDILAESVGDGRVFFAGEATNRQYPATMHGAFLSGMREAANILRVARRRASSSASNPNQTCIDKEEEVDEEEDSCLDQLFETPDLSFGNFSVLFTPNSDEPESMSLLRVRIQMEKPESGLWLYGLVTRRQAIELGEMEGDELRNEYLREKLGFVLVERKSLSQEGESMISSLKAARLNRQIFD