Information report for g09640
Gene Details
Functional Annotation
- Encodes a transcriptional repressor that performs overlapping functions with LHY in a regulatory feedback loop that is closely associated with the circadian oscillator of Arabidopsis. Binds to the evening element in the promoter of TOC1 and represses TOC1 transcription. CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis.
Homologous
- Arabidopsis thaliana: AT2G46830.1
- Brassica napus: GSBRNA2T00132937001, BnaA05G0011000ZS, BnaC04G0011300ZS, GSBRNA2T00073198001
- Brassica oleracea: XP_013637507.1, XP_013637506.1, XP_013637509.1, XP_013637508.1, Bo4g006930
- Brassica rapa: XP_009142593.1, XP_009142594.1, Bra004503
Gene Resources
- Pfam: PF00249
Sequences
gDNA Sequence
- >g09640
AAACAGTTTATGATTTGTTGATAATACAGAGTCAAATGTTACAGGAAGACTATGGACAAGGAAACAAATACAAAGGCCTCAAAAGACAAAGAAAATGTACCAGTGATCTTGAAAATTTAAAAACAGAGTTCAAACAGAACACATGAAAATAGAGTTTCATGTCGAAGCTTGACTTTCCAACCTCATCCGTTTGGGGTCTTTCTGTTCCACATGAATGATAGGATTGGTGTTGAGGATTCTACTTTCTTTGGCTTCCATGGAACATCTTTTATATGGTTTGAAACCTGTTCTTCCTCTACTTATTAATAGCTTTGAAGCATCCAATCCGATTCCGAGAAATCCTGTGTTTCTCCTCTCCTCTTGATCATCAACTGGAGTTAACTGAGCTGTGAAGTTAAGATCAAGTGCCATTGGATATCTTTGTTGTTGTTGTTGTTGTTGTTCCTCCTCTCTGTGTTCTTCTCGATATGTAAAGCTTTGCGGTAGTACCTCTCTGGAGAAGAGAGCTTGGAAGGCAATTCGACCCTGAATGTACAATATTAAGTTTCAACAGACTAGTATGAGAAAATGATTTGAAATAAAGGAAGTTAATCTTTAGTCCAAGTAAGTACCTCGTCAGACACAGACTTCCAAGGATCGGTTATATTGGAGCTGATTCTACTGCGGCGTGCATTGGACTCTGAAGTTTGAGGATTATTAGTGTCTTCATTCATTTCTTTCACCTCACCATTGGTGCCATCCTCTTGCCTCTCTGATGCATCCGCCTCAACATCATCACTACTCGAGGGAGTGTTTGAGCCACACGAAGACCGGTCAACTTGTTTTCTGTCTCCTGCTCCATCTGAACCCTTTGCATCACTCTCAGGTGTTGCAGAAGGCTGCTCATGACAATCTGGTTTACTCTTATTTTCAATCTCCTCTGAGTCCAATGAAGATCGAGCCTTTGATGCCTCAGAGTGTTCTTGCTCTCGGCTCTGCGCAGAAACATGCTGTAAAGTGCTTGTTTTTGTGTACTTTACATCACCGGATGGTCCAAAAGTAGATGGAGGATGACTAGTGAAACCACCTGAACTAAGAGGAGCACATAAAGGTAACAATCCATTGGCAGCCCACCAAGCACTTGCAGCTGCAACAGTGGCAGCGGCCATAGCAGCCAGATTCGGAGGTGAGTTCCCTTGAACAGGTGGGCTACCACTAGAATCGGGAGGCCAAAATGATGAGGCGAAAGTTGCGGCAGTATAGAGAGCCGGTGTTTGTAAAAGGGTTGACATTATATGATTAGGAAACGACTGATAATCTCCTGCAACAATGTGAGGATGACTGTCTGGCTCTGAAGGAGGATGTGATAGAGAACTTGTTATTGAGCTCCCCAATGGCACTAGCACAGGGATACGCATTGGATAAGTCTGAGGTCCTTGCTCATTATCGGTTTCTAGAGATTTTGCATTCAAATCACAGTAATTCTCTGAGTTTGACTCCTTTCTTATCCTGTTATTCTGACTTCCCTGTTATTCCCCCATGTTTAGTTTCATGAAAAGTACTAATCGTCTTAAAACCTCAAATAGCAATGAAAGATTGGTTTTTACCTCTTCCCGTGAAGGCAAGAACTCGCGGAAAGTGCTTGCATTTGATGTCTCTATAGAACTTTTATTCATGGAGGATGCAGCAGAGAGGTACTGATGAGTGAAACAATCTGAACAGTTTTCTTCCTGCAGATTATTATTCTCTTCAGGCTTTGATTGTTGTCGATCTTCATTGGCCATCTAAGAACAAAACACACAATCTGCATTAATAACATGAGGAGCAATATGACACACTACAGAAAGATGTCATTGACCATGAAAATCACCTCAGGATGGGACACTTTTTCTGATCCAAGGGACTCTTGTCCATCATTCACACCCGCTGTTAACATCGGGATACTTCCACTTCCCGTCTTTCTAGGATAAGGATTGCTTGGTTTACGCTTAGGCCGTGGAGGAGGAATAGCTATATCTAGCGCTTGACCCATAGCTACACCTTTAGCTTCAGCCTCTTTCTCTACCTGAGAGAGATGAGAGTAATCTTGTTACCCTCTAGACAAACGCAAGGAAACAAAAATATAATGACACTAACAAGTTTAAATGACAAAACTAGAAAATCAAAAATGGTTTACCTCTATGGCTTATGACAAGGAACAATAAACATATTCAAATGGTTCACCTTGTGAGACAAAAATTTCTAGGACTTAGCCCACTTTTGCCACTACCTCAGAATCGATAAGACTTTCAAGAAGACAGAATTTGATCTCCCCTGACTTTCAAGAGAAACTAACATTCTTCTGAAGATGCTATGTACATGTTTGTGGATTAACAACATATAGGTATAAACCAAACAAAACGATTACACTCTCATAATTTCTCCTACTATCTTAAGACTTATAGCTCATTACTAAACTCTAATACGTAATCTATCTCCTGACTAAAGCAAAAGAAGCAGAAAACTTGCCTGGCTTCAATAAGTCTTAACCATTAAGCCAATGAAGATGAGAACAGCAGTTCAAAATTAACCGATTTTACCTTGGAGAAAAATTTCTGAGCGTGACTTCTTATCTGAACAGCAGTTTTCGTTGCTACATGTTCTGTCCAAATGAAAAAAGCAAAAATCAGTTTGAAGAAGAAACAAAACAAGAAAAACCTCTGCAAACATATAAAGAAAATAAAAAATAAACCTTCAATCTTTTGCCATGCTCTACCATAAAGCCTCAAAGCTTCAATGAATCTATTATGTTCTTCCTCAGTCCACCTTTCACGTTGCTTCGTTATCGTATATGGCTTCCGAGTCTATATCAAGTTTCACTAAATTCTCAATCTTTTTCACCTAAGACAATCATTTTCCCCTAAAATTTAATTAAATTACCTTAATAACCAGATCTTCTCCAGACGAATTTGTCTCCATCACTAAGCTCCTCAAAAGCTATACACACAACTTCAGATCTTCTCTTTACAAAATTCACAAAAAAAAACAAACAATCAAGTCAAGTTTTTCATCAAATTGAGAAATAAGAAAGACCATGAGACAATAAAAACCAGATTCTTAAGTACCTTTAGAGAGATGATAATTCAATGAAAGAAACAAAACTCAGCCTGGATTCGATAAAGATCCCATTTTTAAATTCAGATTTTGTCGGAGAAGAAAACAGTAAGAAATCGAGAAGAAGAAGTGATTTGCTTTTGATCAATGAAACAAGAAAAAGAGACCAGAAGCTACGGAAATGGAGAAATCTCAGC
CDS Sequence
- >g09640
ATGGAGACAAATTCGTCTGGAGAAGATCTGGTTATTAAGACTCGGAAGCCATATACGATAACGAAGCAACGTGAAAGGTGGACTGAGGAAGAACATAATAGATTCATTGAAGCTTTGAGGCTTTATGGTAGAGCATGGCAAAAGATTGAAGAACATGTAGCAACGAAAACTGCTGTTCAGATAAGAAGTCACGCTCAGAAATTTTTCTCCAAGGTAGAGAAAGAGGCTGAAGCTAAAGGTGTAGCTATGGGTCAAGCGCTAGATATAGCTATTCCTCCTCCACGGCCTAAGCGTAAACCAAGCAATCCTTATCCTAGAAAGACGGGAAGTGGAAGTATCCCGATGTTAACAGCGGGTGTGAATGATGGACAAGAGTCCCTTGGATCAGAAAAAGTGTCCCATCCTGAGATGGCCAATGAAGATCGACAACAATCAAAGCCTGAAGAGAATAATAATCTGCAGGAAGAAAACTGTTCAGATTGTTTCACTCATCAGTACCTCTCTGCTGCATCCTCCATGAATAAAAGTTCTATAGAGACATCAAATGCAAGCACTTTCCGCGAGTTCTTGCCTTCACGGGAAGAGGGAAGTCAGAATAACAGGATAAGAAAGGAGTCAAACTCAGAGAATTACTGTGATTTGAATGCAAAATCTCTAGAAACCGATAATGAGCAAGGACCTCAGACTTATCCAATGCGTATCCCTGTGCTAGTGCCATTGGGGAGCTCAATAACAAGTTCTCTATCACATCCTCCTTCAGAGCCAGACAGTCATCCTCACATTGTTGCAGGAGATTATCAGTCGTTTCCTAATCATATAATGTCAACCCTTTTACAAACACCGGCTCTCTATACTGCCGCAACTTTCGCCTCATCATTTTGGCCTCCCGATTCTAGTGGTAGCCCACCTGTTCAAGGGAACTCACCTCCGAATCTGGCTGCTATGGCCGCTGCCACTGTTGCAGCTGCAAGTGCTTGGTGGGCTGCCAATGGATTGTTACCTTTATGTGCTCCTCTTAGTTCAGGTGGTTTCACTAGTCATCCTCCATCTACTTTTGGACCATCCGGTGATGTAAAGTACACAAAAACAAGCACTTTACAGCATGTTTCTGCGCAGAGCCGAGAGCAAGAACACTCTGAGGCATCAAAGGCTCGATCTTCATTGGACTCAGAGGAGATTGAAAATAAGAGTAAACCAGATTGTCATGAGCAGCCTTCTGCAACACCTGAGAGTGATGCAAAGGGTTCAGATGGAGCAGGAGACAGAAAACAAGTTGACCGGTCTTCGTGTGGCTCAAACACTCCCTCGAGTAGTGATGATGTTGAGGCGGATGCATCAGAGAGGCAAGAGGATGGCACCAATGGTGAGGTGAAAGAAATGAATGAAGACACTAATAATCCTCAAACTTCAGAGTCCAATGCACGCCGCAGTAGAATCAGCTCCAATATAACCGATCCTTGGAAGTCTGTGTCTGACGAGGGTCGAATTGCCTTCCAAGCTCTCTTCTCCAGAGAGGTACTACCGCAAAGCTTTACATATCGAGAAGAACACAGAGAGGAGGAACAACAACAACAACAACAACAAAGATATCCAATGGCACTTGATCTTAACTTCACAGCTCAGTTAACTCCAGTTGATGATCAAGAGGAGAGGAGAAACACAGGATTTCTCGGAATCGGATTGGATGCTTCAAAGCTATTAATAAGTAGAGGAAGAACAGGTTTCAAACCATATAAAAGATGTTCCATGGAAGCCAAAGAAAGTAGAATCCTCAACACCAATCCTATCATTCATGTGGAACAGAAAGACCCCAAACGGATGAGGTTGGAAAGTCAAGCTTCGACATGA
Protein Sequence
- >g09640
METNSSGEDLVIKTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQIRSHAQKFFSKVEKEAEAKGVAMGQALDIAIPPPRPKRKPSNPYPRKTGSGSIPMLTAGVNDGQESLGSEKVSHPEMANEDRQQSKPEENNNLQEENCSDCFTHQYLSAASSMNKSSIETSNASTFREFLPSREEGSQNNRIRKESNSENYCDLNAKSLETDNEQGPQTYPMRIPVLVPLGSSITSSLSHPPSEPDSHPHIVAGDYQSFPNHIMSTLLQTPALYTAATFASSFWPPDSSGSPPVQGNSPPNLAAMAAATVAAASAWWAANGLLPLCAPLSSGGFTSHPPSTFGPSGDVKYTKTSTLQHVSAQSREQEHSEASKARSSLDSEEIENKSKPDCHEQPSATPESDAKGSDGAGDRKQVDRSSCGSNTPSSSDDVEADASERQEDGTNGEVKEMNEDTNNPQTSESNARRSRISSNITDPWKSVSDEGRIAFQALFSREVLPQSFTYREEHREEEQQQQQQQRYPMALDLNFTAQLTPVDDQEERRNTGFLGIGLDASKLLISRGRTGFKPYKRCSMEAKESRILNTNPIIHVEQKDPKRMRLESQAST