Information report for g08340
Gene Details
Functional Annotation
- Encodes a MADS-box transcription factor involved in floral transition.;Encodes a MADS‐box protein
- Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.;MADS-box transcription factor;MADS-box gene
- Encodes gibberellin 20-oxidase. Involved in gibberellin biosynthesis. Up-regulated by far red light in elongating petioles. Not regulated by a circadian clock.
- Member of ASML2 family of CCT domain proteins.There is a preferential accumulation of RNA isoforms CCT101.1 and CCT101.2 in response to N-treatment, each isoform has different targets.
- Member of the RAV family of DNA binding proteins. Contains B3 domain. Recognizes 5’-CACCTG-‘3 motif.
Homologous
- Arabidopsis thaliana: AT5G51870.3, AT5G51870.1
- Brassica napus: BnaA10G0089200ZS, GSBRNA2T00110227001, BnaC03G0160100ZS
- Brassica oleracea: XP_013627103.1, XP_013627104.1, Bo3g023570
- Brassica rapa: XP_009107050.1, XP_009107045.1, XP_009107040.1, XP_009107033.1
- Raphanus raphanistrum: RrC10331_p1, RrC17819_p1
Sequences
gDNA Sequence
- >BRADI_1g08340v3
AGAACACAAAAAGCAAATTAAAGCTTAGACTTAGGGTTTGTGGCTCCTGTACAAAGAGGCACAGAGGTAAACACAGAGTCTATCATCATAAGATCTAGCTCAGCCTCTCTCTGAAATTTAGATTTAGGGTTTTACTTTCCGCCATTATTAAGCTTTTGTTCCTTTCATTTTTTTTTTTTTTTTTTTAAGATGTGCAAATTATATCCCTCTAACTTTGTCGGCTGTTTTTTGTCTGGAAAAAATTATGTTCTATGGAGCTTTAATTTTGAAGTGAATCTAGACAAATCTGGTTTTGGATCTCCTCAGTTTCCAACATTTTTCAAGTTATCACCTTTGACTTCTGGCTTTGAATCTCCTTCTCGTTTTTCAAGAAATCATTTATTGGTTTGGTCTGAATGAAATTTCCTTTCGGATTTAGTTAGGGTTTCAAATCTGATGAATCTTGGAATGAAAATCGTAGGAACAATGGTGAGAGGGAAGATTGAGATCAAGAAGATTGAGAACGTGACGAGCAGACAAGTCACGTTTTCGAAGCGAAGGAGCGGTCTATTTAAGAAGGCTCATGAGCTTTCGGTTCTATGCGATGCACAAGTCGCCGCCATTGTCTTCTCTCAGAGTGGAAGATTACACGAATACTCTAGCTCCGAGTAAGATATTCTTTCATCTAATTATTTCAAAATATTTTACACGTGTCTATTTTTAAAATCTTTCTCTACGCCTAGATTTATTGAGTGTTTAGAACTTCTGTAGTGAACTGTAGTGAATAGTTCTATTTCTCTGGTGAAATCGTACTAGAGATTTTACAATATACACGTTAAAGATTTGTCCCCTTTTTTCTTTTTTGGTACTAGCTAGTTCCTGAGCCCAACAAATGCCTTGTCACATTCTAATTTAATTTTTGTAAGTACTTCTTGATTTTATTTAAGCAAACTTACAAAGTTTGACTAAGAGAGTTGTTCTTCAAGCACGAGCAAGTGGATTTTATTAGGGTTTTCAGAAAAAGAGGTTTCTTGAACAGTGAACCTCGTATACCTTGGAACTTAAACTGTTTACCCACACACCCACTTGGCATATGTTTTTTTTAGAATATCCAACAATAAATGATTATCCGAAAATGTAGTTACATGTAAGTACAGAAAGTTTTATATATTATGCATAAGAAGATTTAAATCTCTCGGGGATCCAAACTTTGTCGCTAGATTTTCAATCATGATGAATATTCATTATAGGAGCCAACAAAAAGTCGATACATAGTTCATGTTATCCTTTTTGTTTTCTTTTGGTCAAGGTCAAATTGTCTAAAAAAATAGTGTACAGTTTTAACAGAGTAGGAGATTCATGATTTTGCAGAGTTCCCTTTTGTTTCATTTTGCATTTCATGCTTGACAAATTTTGTGCAGCAAACCAATTCTCCATTGGGTTTGGTGATTGCAACAACGAATTTGATTATATAGAATAATGTTATCTAAATTAGATATCAAATTTTACCAAAATCTTGGTTGATAATCATGGAATTCCGTATTAAATGATCATAACATGTATTTATATATTTTAAGGATATTCACACATAATATATCAATCTCATGAATGTCATCATCATGCATCACTGATAAAGAAAGCATCTCTTTTGAATTAACTTTTCAGGATGGAGAAGATTATAGAAAGATATGACAAGTTTACGAATGCCTTGTATGTGGCAGAGAGGCCCCAAGTAGAACGATACTTGCAGGTTCTCTATATCCATACCTATTCTTTATCTTAGTTTCTTCATTTATTTTAAAGTTTTTGATATGTACATTATGTTAGACTCGAAATGTATTTAGATGATAGTATTGACTATTTTTTGGGGGTTGTATAGGAGCTGAAGATGGAAATTAATAGAATGGTGAAGAAGATTGATCTTCTTGAAGTTCATCACCGGTTCAAATCTCACTAATTTGTTTCAGTCATTACTCTATCCATTGTATATAACTATACTTTGTTTCAGTCCTCCTAAAATATATTGAAATTTGTTATCTCTCTTGAATGCCACTATATATGAAGTAAGCTGTTGGGGCAAGGTTTGAATTCGTGTTCAGTGGCGGAACTTCAAGAGATAGACACTCAAATTGAGAAAAGTCTTCGTATTGTCAGGTCAAGAAAGGTACAAAACACACACACACACACATATTAGTATACGTATCTATACATACATGTTCATGATGTAATAATGTCTTCATTGGTTGATCTTGGTGCGTAGGCTGAGTTATATGCAGATCAACTGAAAAAGTTAAAAGAAAAGGTAAAATTTTTACCTGAGTAATTATATACAAAATCTAATCTATGGGATTGGTTGTATATTCTCCATGTAATTTTAATCGATCTTTCTTGCTCGGATTCTAGGAGAGGCAGCTCTTGAACGAAAGAAAAAGGCTGCGTGAAGAGGTAAATACGCACACACTCATCATAGGATACACATAAGACACACATAAATTTTAGTTAAATATAGCTCTTCGTTTAGGTATGTAGAAGCTTAGATATATATTTATTTCATTCCATTTCTAAGACTTCTTCTTATAAAAAGAATCATGGTTTATTGAAGACCGTACCCGATCAATTGTAGAACTATTGAGGCTTTTTTTGTTTGTGTTTGCATGCATCTACGTTTACATTTACCATGTTTTTGCCTTTTTTGGCCAAATTAGTCTCATAACCATAATTAAACATTTTAAACAAAATTTATTTGTTTATTGTAAACGCAAATGGAATCACGTTTGTGTTTGGCGTTTTCGTTTTCATTTTGCAAATTTGAAAATTGAAAATGTTTTCTATTTCAAAAATGTGAAAACCCCAATTTGTTTTTCCATGTAAACGCAAACATGGAAATTTTGTTTCGTTAAGAGCTTGCGTTTCCTTAATTTTCCATGCTCTCCTTTAATTTTAGTACTTGCATCAGTTTCTCTAAAGATATGTTAGGGAATATTATTCCTCTATGAGTCGCTTTTTAATATCTAACTCTCCTCGAGTTACATTGGTTTGGTGGAATTAACAACGTAAATTTCTTATATATCAAAAAGAAAAATATAGGTAATAATAGGTCTATGGATATATATGTCTCTGAGCTATATCCCTCTTTCTTTATATACATATTACGAAAAATAACTTTATAATTTATATTTTCAGCAAATTAGAGAAATGTTGATGCGACCGGTGGTACAACCAACTTTACAAATCTGTGATAAGAGTAAAACTGAAGGTGGTTGCAGAACCAAACATTCATCGGAGGTTGAAACCGATCTATTTATTGGATTGCCCGTGACTCGGCTATAACTTATTTCACACGTTCCGTAAATTGGCTCACAGTTTTAATTACTACTTCGGTTCCATGTTTGTATACTATAATGCTTCCATATAGTTTATTGTTTTCGGAGTGCTCTGGCGATATCTTAATATATGTGTATAAACTGGAAATAATTTGACAAGTACAAGTTGTCATTTTAGTTTTTATTTTGGAGTAAGTGTAACATTTTGTTTCTAATGCAAATGTGTCTAATGTGGTGTCGTCTTAGACCATGTACACCGGTGAATTTTGCCCAGTATCATTAGCCCAAAAACTATTTTATAATAGACCAAACCACTAAATTGGGCCTGATACGTATCAGTGGACTGATACCTCTGATACTCAATTTCATGTGACGTGTCGGTTTGCCATTGGTTCGTCTATTTTTTTGGTTAAAACAGAGAAAAAAAAATTCTTTTCTCCAACTCTCTCTCGCCTCTTTCTCAACTCTCTCTCGAAAACCAGCAGTCGGTTTCCGCCGAACGTCGATGCTCATCTCCGGCCACCGGGTTTGATTCTGAACCGACCTGTTAACCCGTTTCTTCAGAACGCCAACCCTAATCCAAATTTGATTCAACAAGCCAATAATTTCCAGCAACAGCAACAGCAACAGCAACAGATGATGATGATGATGATGCAACAACAGCAACAACAACAACAAAAACAGCAGAAATTGATGCGTCCATCGAATCAATTGGAGATACAATTCGCTTACCAAGACGCTTGGCGTGTTTGCCATCCTGATTTCAAGCGACCTTTCGCTTCTCTCGAAGACGCTTGTGAAAGGTTCGTCTAATTCTGTTTTTCCCAGTTATTTTTTTTACATTATTGAATTGATTTTATGGGTTRTTCTTGAAATTTCTGTGTTTATTGATTTCTTGAAATGGTTCTTTGAGTGAATTGATTCTCTGGTAGTCATTAGTTTTATAGATTCTAAAGAGGAATATCCAACTCATAGTGTCTCTATCACCATTTTATCATAAAGGCCAATGMTTTAT
CDS Sequence
- >Solyc08g083400.3
ATGGTGAGAGGGAAGATTGAGATCAAGAAGATTGAGAACGTGACGAGCAGACAAGTCACGTTTTCGAAGCGAAGGAGCGGTCTATTTAAGAAGGCTCATGAGCTTTCGGTTCTATGCGATGCACAAGTCGCCGCCATTGTCTTCTCTCAGAGTGGAAGATTACACGAATACTCTAGCTCCGAGATGGAGAAGATTATAGAAAGATATGACAAGTTTACGAATGCCTTGTATGTGGCAGAGAGGCCCCAAGTAGAACGATACTTGCAGGAGCTGAAGATGGAAATTAATAGAATGGTGAAGAAGATTGATCTTCTTGAAGTTCATCACCGTAAGCTGTTGGGGCAAGGTTTGAATTCGTGTTCAGTGGCGGAACTTCAAGAGATAGACACTCAAATTGAGAAAAGTCTTCGTATTGTCAGGTCAAGAAAGGCTGAGTTATATGCAGATCAACTGAAAAAGTTAAAAGAAAAGGAGAGGCAGCTCTTGAACGAAAGAAAAAGGCTGCGTGAAGAGCAAATTAGAGAAATGTTGATGCGACCGGTGGTACAACCAACTTTACAAATCTGTGATAAGAGTAAAACTGAAGGTGGTTGCAGAACCAAACATTCATCGGAGGTTGAAACCGATCTATTTATTGGATTGCCCTGGACTGATACCTCTGATACTCAATTTCATGTGACGTGTCGGTTTGCCATTGGTTCGTCTATTTTTTTGGTTAAAACAGAGAAAAAAAAATTCTTTTCTCCAACTCTCTCTCGCCTCTTTCTCAACTCTCTCTCGAAAACCAGCAGTCGGTTTCCGCCGAACGTCGATGCTCATCTCCGGCCACCGGGTTTGATTCTGAACCGACCTGTTAACCCGTTTCTTCAGAACGCCAACCCTAATCCAAATTTGATTCAACAAGCCAATAATTTCCAGCAACAGCAACAGCAACAGCAACAGATGATGATGATGATGATGCAACAACAGCAACAACAACAACAAAAACAGCAGAAATTGATGCGTCCATCGAATCAATTGGAGATACAATTCGCTTACCAAGACGCTTGGCGTGTTTGCCATCCTGATTTCAAGCGACCTTTCGCTTCTCTCGAAGACGCTTGTGAAAGGTTCGTCTAA
Protein Sequence
- >Solyc08g083400.3
MVRGKIEIKKIENVTSRQVTFSKRRSGLFKKAHELSVLCDAQVAAIVFSQSGRLHEYSSSEMEKIIERYDKFTNALYVAERPQVERYLQELKMEINRMVKKIDLLEVHHRKLLGQGLNSCSVAELQEIDTQIEKSLRIVRSRKAELYADQLKKLKEKERQLLNERKRLREEQIREMLMRPVVQPTLQICDKSKTEGGCRTKHSSEVETDLFIGLPWTDTSDTQFHVTCRFAIGSSIFLVKTEKKKFFSPTLSRLFLNSLSKTSSRFPPNVDAHLRPPGLILNRPVNPFLQNANPNPNLIQQANNFQQQQQQQQQMMMMMMQQQQQQQQKQQKLMRPSNQLEIQFAYQDAWRVCHPDFKRPFASLEDACERFV