Information report for g07382
Gene Details
Functional Annotation
- Encodes a structural core component of a COMPASS-like H3K4 histone methylation complex.;Encodes WD repeat‐containing protein 5
- Encodes a 645-amino acid methylcytosine-binding protein with a PHD domain, two RING finger domains, and an SRA domain that is involved in centromere heterochromatinization. This protein functions as an E3 ubiquitin ligase in vitro. The protein has been shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the former. It plays a role in the establishment/maintenance of chromatin structure during cell division and is localized in the nucleus. Plants over-expressing VIM1/ORTH2 show an inhibition in root growth and a delay in flowering. Both over-expression of GFP:ORTH2 and loss of ORTH2/VIM1 lead to decreased levels of DNA methylation. GFP:ORTH2 over-expressers also have increased levels of FWA transcripts.
- Ubiquitin-specific protease, which together with UBP12 deubiquitinates DA1, DAR1 and DAR2, hence reducing their peptidase activity. Works upstream of DA1, DAR1 and DAR2 to restrict their protease activity and hence fine-tune plant growth and development.
Homologous
- Arabidopsis thaliana: AT3G49660
- Brassica napus: BnaA06G0270700ZS, BnaC03G0562300ZS
- Brassica oleracea: Bo3g109400
- Brassica rapa: Bra019610
- Citrullus lanatus: Cla97C01G017310
- Cucumis melo: MELO3C007681
- Cucumis sativus: CsGy6G028950
- Gossypium hirsutum: Gohir.D11G212900, Gohir.A11G210200
- Juglans regia: Jr11_05460
- Manihot esculenta: MANES_12G119800
Sequences
gDNA Sequence
- >g07382
ATCTTGAAATCCAGGAGCCACCTTACCTACCATATGCTTAAGCAGACGATCAAATGGATAACAGAAGGAAAACATTCACAAGATTCCTACCAAGTGCAGCATCGATCCCACCATCATCACCCTCGTCTAAATTGGAACCGTTGCCATTGGTCCTTTCAATTACGTAATCACCAAACACCACTGTTTTTTCTCTCCACTTCGACACTTTCTTTCTCTCTCTTGGTACGTAAGGGGGTAGGATTTATTGAGAAGCCTAATAAACAATGTGAAATCCATCAGATAGAATCAACTAGTAGAGAAATTGAGCTACTTGGAAGTTAATTCACTCAAATCAATCTTTTGAACTTCAGATCTAAGTTCATTGATTGATTTGGACATAAGTAATTGAATCTTGCTATCAAGATACTGAAAAAATCTAAATTCCCAGCAGAAGAAACTGAAACGAAACAAAAAACATATCCTTTGAGACATAACATCAAACACTTGCAAGACAAAGAATTTAACATCAAAGAGAGACATCAAAGAGTGATGCTAACTAATTCTCTGTTGATCTTAGAGAGGAACGGAGCTAAGGATTTACCAGATGTGGTGGTGTTACAGACAACCTCGTACCAGTCGTTGAGATAACAGTCTCGTCATCCGATTCCAAAAGGAAAAAGAATCTCGATACCTCCACAGATTCGATTACATGAAGTTGAAGAAGACGAAGATGGAGATTGAGCTGTCGTTATCAAAGGGCCATTGATGAACAGAGTTAGGATAGAGAGTAGAACACATATGTCTCTCTTTGATGTTTAGTTAGCATCACTCTTTGACGAAGACAAGCTAGAAGAGTTCATCAACGAAGTCKTCATTCTCGTCTACGCAAATGACATCCAAACATTTTTAATTCAAAAACAAAGACAATAAATTCAACAGATCTAACAAAGAATAAATCTAAATTGAAGAGTAAAATTAAGAACCTATCAAATTAAGGGAAGAGGGAGTTCGGTAGAGGAGAGTAAGGATCTCCTTCTTCTTCGTCTCGTAAAAGAGAAATCGATGATGGTGGTTGGAGAAAGAGAAATCGATTAGCTGGGACTATTTTCTAACTAATATTTCTAATCAAACGAGAGAGGAGAGAAAGTGTATAACATGTCTTTAGTTAAATTAGGGGCAATAGCGTCATTTTTGTCTCCAAAAAGAAGGAGAAGTGCCTCTTGTTTTGAAAGTGTCTAAAGTGTAAGAACTTTGGCTATAAATCACCCTTGAAAAAATGTATTTTTGTATTGGGAAAACAGAGAGAACCAAAGAGGAAACATATTCTGTATCACCTCTCGCAAGTCATTTTCGATTTGCAGAATTTACTTAAACGTAATGGTGTCAGATCGAGTTTGTGTCTCTTCTACAACAATAGACATTGAATCACTGATGAATTTACCTCTCTCTATAGGAGAGTTTTTTTTTGCACTTGTTCATTCTTTCTTCGTGTGTCCAAAACTTTTTTATTGGATCACTGATATATGCAATAGTTTTCGGATGGGTGGGATGCCACGCTCGTGACAGCTTTGAGAGAGATAAAGCTATTAAAAGAGCCGTTGAACTCTTGACGCTTTCCCTCACAATGAAAGTTTGCATCTAGTTTTAATTTTGAGTATATGCAAACGGATTTAGAAGCAGTGATTCGTGATCGGAATATCTTTTTATCTCCTGGAGATATTAATAAGTCTTATTTGTTGATGACTTTGAAGGGGTTTAGCTTATTGTCACAAGAAAACCATGTACTATCTTCTATAATTTTGAAGAAGTATACTATCTTCTCTGATTTTCTAGGAGAATGTAACTGGTTTAGTCCACAGGATAATCTTGGACTATCTTCTATAACAAAAGAAGCAAAACATAAGGACATATGGCCTCTTTAGGGAAGCTAAAAAAATTTGGTTGCCATTGGTTTCGGTTTCATATTATGAAAGTTAATTCACCCGATTGTATTGTATCGTCTTTGTAGCTAAAGAATGAGAAAGATGAATTGTTGTTAGAGAGGATAAACCAATTGGAGGCAGAAAGTCAGATTGTAACCAAGAAAGGTTACATTTGAATTCTGAAAGTTATCTTTTCCATCTTAATAAACATTAGCTAAAAGCGTTTTAAGGGGTTGGAGGTGATGATATTGTTGGTTGACTTGGTGGTACAGATGGTGATTTCCTTGCTGATCGATAAACTGCAACGCCGGGACTGGTAAGGGGAGTGCGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGCAATCCAAATATGTCTTCTTAAAGGAAACTCCGCAACAGTCACAGATCCACTGTTTTGTAGGGGAAAGTCGACAATCAGCTAGTAGGCTCCGAGAATCTACTAAGAYAACATTGTAAAAATGTTTCTCATTCAAAGATTTAACAACACTTGCAGAATCAATCCTTAGTTCTAAACATGATTCAACCCATATTGGCAAACTATTGCAACATAATCCATTGTCTAAATTAGTTCTGAACATAATCCATTCTGGAGTAATTACAACATAATCCATTGTCCCTCGCCTAATTATTAATACCAATTTTGTCTCCGGGCCAATCACCTCTATAACTTTGAGTAGTAGAGAGTAATTATTCTCTAAGAATAGGAAAACAATAATGAACCAAGGGAAATGATGAGAAAATGCAGATAGCAAAATACTCTCATAGGCTATGAACCCGTTGTTTTTTGAGTTAACAAGTTTAAAGATGGGAAACAAAGTAGGGAAACATAATCCAGAATGAGCTAATAAACATTAGCTAAAAGCATTTTTAAGTGGTGGAGGTACTTGCTGAGCCAAATGCATTTATAAGTGGTGGAGGTAGTTGCTGAGCCAAACGGGATTTCCTTGCTGATCGATAAACTGCAACGCCGGGACTGGTAAGGGGAGTGCGGGGGGGGCGGGGGCAATCCAAATATGTCTTCTTAAAGGGAACTCCGCAACAGTCACAGATCCACTGTTTTGTAGGGGAAAGTCGACAATCAGCTAGTAGGCTCCGAGAATCTACTAAGACAACATTGTAAAAAGGTTTCTCATTCAAAGATTTAACAACACTTGCGACCTGCTTGTCTTCTTTGATGTTTTCAGAGAGAATAAACAAATTTGATGGACAAGGACGATGGKTGTGTGCCCAGATAAGAATMTRCACTGTCATGYGGTGAAGTCTGGCATGTTTATTACCTGGAAATAGTATATCAACAACGAGATAATTACATATATACATGAGAAAATAAAAACAATATATAAGAGAGAAAAAGTAAAAAGGAATTGTCTCACCTTTGGCTACGGGTAAATGAACCATTCCGGAAGACGTATATGCATATAACAGGTTGTCCGGGATATCATCATCAAAKAAGGCCTSGATACTCGTGTCAGAGCGTARATATCCTCTATCATTAAGATGGGAGAAGGTTTTCTCAACAACCAATTCAGGATCTAGATCCTTAAGGATCGACCAATCCTCCACGTCCCAGAAGATCGTATTTTCATCCCCTGCGTGGTTTAACATAACGGAGACGCAAGACAAGGAATCAGATCTCGTGATTAGATCCTCCATTAAAATCGATAATTAGGGTTTACAATCACATCCAATATACATATATATATATATATATTGAATGAATAGATACAATATAAACAAACAATTTCGATCTTACAGTTTCTAGGAGGGTCAGGCATTGAGACGCCGGATGATGTTTCATCCCCTGCGTGGTTTAACATAACGGAGACGCAAGACAAGGAATCAGATCTCGTGATTAGATCCTCCATTAAAATCGATAATTAGGGTTAAATGAATAGAGACAATAAACAAACAATTTCCATCTTACAGTTTCTAGTAGGGTTAGGCATTGAGACGCCGGATGATGACCCGATGATAATAGACATCCTATAAATTTCGATCTTCATGCATCTATCTATCTATATATATACTAATAAAGCCCAGAGAGTATCTTATTGGGCTGGCAGATAATATGATCAAATAAGTCCATTTGATTTTCTGTATTATTACCTCTCGAGTTTGTGTCTCTTTTACAACTGTATCGCACTTTCTACATCACTAAACAACTGATGAAAGCTAGAATCAATCAAAACAGAACTACATTAGCAAGAACAGGATGATACTCCATTGGATCACTGATCAACGTACCTCTCTCTGTAGGATGGGTTCTAAAAGAGAGTTTTACTGTTGTTGTTTATTCTTTCTTCTGTGTCCAAATCCTTATTGATTTGTCTAGTGAGCCTGATGCAATCAAGTTTTCGTTGGGTGGGATGTCACGGCCGTGACGGTTTCCTTGTGACCTTCAAGTTTCTGAAGCATTTTCTTGGAATTTAACTCCCACATGTAAACACAGTTGTCCTCGGATCCGCTAATGATCCGCTTCCCGTTCGAGAAAGAGAATGCAGAGGAAATGCAGTATTGGGAGTTTGTGTGTCCGCTGTATGTCTTGATGAATTTAGCTGTAGCAATGTTCCACAACCTCTGTATATTGAATACCGCAGAGATTAGCGAATGATCATACAGATTTAGAGATTGACAATGGCATACGACGAAATAAAAGAAAGCGAAAAACACAATTTCTAACAATCTGAGCTTCAAATCCATCTCAAGTAACCTAAAGATGTATCTTTTAAAGTTAAGCTAAACTCTAACACGACACTATCGACCCAAAATGAAACCATTAATGTTTCTACTATTCATCTAAAGCTATAAAAATTTCCTATGTCAAAGAGTAAGTCCTAGATGGCTAGATCAGAAACACAATGCCTTCCTAATGTCGTTTTGATTCAATTCACCTACATATGAATTCGGAAACAAGAGCAACCCCAAATCAAAATAACTTAACATTGTAAAGGTCAAGTCTTTGAAACTCACTCACCAGCTTATTGTCGAGTGTGCCAATGAGGATGAATTTGCCATTGGGAGAGAACTTAACGAAGGAAACAGGAGGGTTCTCATCGTCAATTAAGGTCTTCACACAATGCCCAGTTCCAGAATCCCAAATCCGACACAACCCATCGTAGCTGCTTGACACAATCAAAGACCCGTCACGATTGAAATCAACACAAGTCACAGGATCAGAATGCGCAGGAAGAACTTTCAAGCATTTGCCAGATTTAACATCCCAAATCCGAACAGTCTCATCAAAAGAACCAGAGACAATCATGTTGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGATACACCGTTGTCGTGGCCGGAAAACTCGTGAACGGGCTTGGCGATGGAATCTTCTTGAGCAATGTCGATTGCGTAAGTGCGGATTGTTTTATCTCCGGAGGCGGAGGCTAAGAGACGGCCGTCGGTGGAGAATTTGACGGAGGAGACGGCATGGGAGTGGAAATTTAGGGTTTGGGAGTGAATGTAAGGTATAAAGCATCCACCTTTAACTTCCTCTGCCATGAGTATCCGAAAAAAGGTTTGATCTTTGCTCGGAATTCAAATCGTTATGTTTATGAGGATTGGGTCGGCGAAGTTGGGTTTTTGGAAAGGGTTGTGTTTTTTCTGGTTTAGTATACTACAAGATTTTGGGGTGAGTATTGAAAGTAACAACAATGTTGGGGTACTAATGTAGCATGCTACAAACTTTTGGGGTGAGTTTTGAAAGTAACAACAATGTTGGGGTCTATTTC
CDS Sequence
- >Solyc06g073820.2
ATGGCAGAGGAAGTTAAAGGTGGATGCTTTATACCTTACATTCACTCCCAAACCCTAAATTTCCACTCCCATGCCGTCTCCTCCGTCAAATTCTCCACCGACGGCCGTCTCTTAGCCTCCGCCTCCGGAGATAAAACAATCCGCACTTACGCAATCGACATTGCTCAAGAAGATTCCATCGCCAAGCCCGTTCACGAGTTTTCCGGCCACGACAACGGTACTGTTCGGATTTGGGATGTTAAATCTGGCAAATGCTTGAAAGTTCTTCCTGCGCATTCTGATCCTGTGACTTGTGTTGATTTCAATCGTGACGGGTCTTTGATTGTGTCAAGCAGCTACGATGGGTTGTGTCGGATTTGGGATTCTGGAACTGGGCATTGTGTGAAGACCTTAATTGACGATGAGAACCCTCCTGTTTCCTTCGTTAAGTTCTCTCCCAATGGCAAATTCATCCTCATTGGCACACTCGACAATAAGCTGAGGTTGTGGAACATTGCTACAGCTAAATTCATCAAGACATACAGCGGACACACAAACTCCCAATACTGCATTTCCTCTGCATTCTCTTTCTCGAACGGGAAGCGGATCATTAGCGGATCCGAGGACAACTGTGTTTACATGTGGGAGTTAAATTCCAAGAAAATGCTTCAGAAACTTGAAGATAGATGCATGAAGATCGAAATTTATAGGATGTCTATTATCATCGGGTCATCATCCGGCGTCTCAATGCCTAACCCTACTAGAAACTGGGATGAAACATCATCCGGCGTCTCAATGCCTGACCCTCCTAGAAACTGGGATGAAAATACGATCTTCTGGGACGTGGAGGATTGGTCGATCCTTAAGGATCTAGATCCTGAATTGGTTGTTGAGAAAACCTTCTCCCATCTTAATGATAGAGGATATYTACGCTCTGACACGAGTATCSAGGCCTTMTTTGATGATGATATCCCGGACAACCTGTTATATGCATATACGTCTTCCGGAATGGTTCATTTACCCGTAGCCAAAGGTAATAAACATGCCAGACTTCACCRCATGACAGTGYAKATTCTTATCTGGGCACACAMCCATCGTCCTTGTCCATCAAATTTGTTTATTCTCTCTGAAAACATCAAAGAAGACAAGCAGGTCGCAAGTGTTGTTAAATCTTTGAATGAGAAACCTTTTTACAATGTTGTCTTAGTAGATTCTCGGAGCCTACTAGCTGATTGTCGACTTTCCCCTACAAAACAGTGGATCTGTGACTGTTGCGGAGTTCCCTTTAAGAAGACATATTTGGATTGCCCCCGCCCCCCCCGCACTCCCCTTACCAGTCCCGGCGTTGCAGTTTATCGATCAGCAAGGAAATCCCGTTTGGCTCAGCAACTACCTCCACCACTTATAAATGCATTTGGCTCAGCAAGTACCTCCACCACTTAA
Protein Sequence
- >Solyc06g073820.2
MAEEVKGGCFIPYIHSQTLNFHSHAVSSVKFSTDGRLLASASGDKTIRTYAIDIAQEDSIAKPVHEFSGHDNGTVRIWDVKSGKCLKVLPAHSDPVTCVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVKFSPNGKFILIGTLDNKLRLWNIATAKFIKTYSGHTNSQYCISSAFSFSNGKRIISGSEDNCVYMWELNSKKMLQKLEDRCMKIEIYRMSIIIGSSSGVSMPNPTRNWDETSSGVSMPDPPRNWDENTIFWDVEDWSILKDLDPELVVEKTFSHLNDRGYLRSDTSIZAXFDDDIPDNLLYAYTSSGMVHLPVAKGNKHARLHXMTVXILIWAHXHRPCPSNLFILSENIKEDKQVASVVKSLNEKPFYNVVLVDSRSLLADCRLSPTKQWICDCCGVPFKKTYLDCPRPPRTPLTSPGVAVYRSARKSRLAQQLPPPLINAFGSASTSTT