Information report for g05287
Gene Details
Functional Annotation
- Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation. Mutations in TIR1 block auxin stimulation of flavonoid synthesis.
- Serine/Threonine kinase family catalytic domain protein;(source:Araport11)
Homologous
- Brassica napus: BnaC08G0417600ZS, BnaA09G0568100ZS, BnaC04G0258600ZS, BnaA07G0222100ZS, BnaA04G0003900ZS
- Brassica oleracea: Bo6g079740, Bo4g098350, Bo8g098290
- Brassica rapa: Bra007720, Bra003518, Bra014378
- Glycine max: Glyma.02G152800, GmTIR1A
- Gossypium hirsutum: Gohir.D08G080700
- Juglans regia: Jr08_12700
- Manihot esculenta: MANES_05G067800, MANES_01G214300
- Prunus persica: PRUPE_8G253300
Sequences
gDNA Sequence
- >g05287
CTCCTCTCCTCTCCTCTCCTCTTCTTCATCTTTGTTTCTGCTTCTTCTTCTTCGAAACTAGATTATCTCCGTCAATGGCGCCTCAGATCTAACCTTCGGATATAAAAATATACTTGTTCAACTCTTCCTCGAACTTTTCCCTGTGGTTGGATCATCGAGATCTCGAGGTTATTTGGCCGCAATGCAGAAGCGAATAGCCTTGTCGTTTCCAGAAGAGGTGCTTGAGCATGTATTCTCGTTTATTCAGCAGGATAAGGATAGGAACTCGGTCTCTCTGGTGTGCAAGTCATGGTACGAGATCGAGCGTTGGTGCAGGAGGAAAGTCTTCATCGGGAACTGTTACGCCGTGAGTCCAGCGACGGTGATTAGGAGGTTCCCGAAAGTGAGATCCGTGGAGCTCAAGGGGAAACCTCACTTTGCTGACTTTAATTTGGTACCCGACGGATGGGGAGGTTACGTGTATCCATGGATTGAGGCCATGTCGTCGTCTTACACGTGGCTTGAAGAGATAAGGCTGAAGAGGATGGTGGTGACCGACGATTGCTTGGAGCTCATAGCCAAGTCCTTTAAGAATTTCAAGGTTCTTGTGCTTTCTTCCTGCGAAGGCTTCTCCACCGATGGTCTCGCTGCTATCGCTGCCACTTGCAGGTATTCCTTCATGAAGAAGATGATTCCCTTTTGCTTTTGGAAGAATCATTCGTTTGAATTAATAAACTGTTTGATATGTGATTTGTAATTTCATTCTACTACTTGAGTAATTTGATCTGGGCATAGATGTTTTGCTGCGTTGTTCCTGCTGATGTTACTCTGTTCTTTGTTGTTTTTTTCTTGGGTCAAGATTTTGCGTATCTAAAAGATTGATGTTTTAATCACGTTTCTAAAGATTCTTAATATAGCCATTCTTTTATCTCCTATTTCACGGTGGTATATATCTATTTATTCCTGGATTATTCGCTCTCAGTGAATCTCCTGAGAGTGGGAAATCTAGTCAATTTGGCTTTTCTTTTACTTTTCCTTTTGTGGTTTCTTTTTTACCTTGTTGGGAAACTTTGATCTGTTTTCGGATTCCCCTTCTTTAGCTCTGTTTTAGCATCTCTCACTATGTGAATTTTTTAGTAATTGTGTAAATTGTTCTATGCTTATATAGTTTCCCAAAGTGATCTATCTACATTATTGTATCAAATACAACTTTGAAGAAATTAACTACAATTATGCACATGATTTTATTTATTTATTAGGTCCCTTTTGTAGCAATGTTTATGTATTGCAAGTTGTATAACGTGGGTCACTCGATGCTAATTATGTGATTCTTATGCAGGAATCTGAAAGAGCTTGATTTACGCGAGAGTGAGGTTGACGATGTTAGTGGCCATTGGCTTAGCCATTTCCCAGATACTTACACATCTTTGGTATCACTCAATATCTCTTGCTTAGCATCTGAGGTCAGTTTTTCTGCTCTGGAAAGGCTGGTGACTAGGTGTCCCAATCTCAAGTCTCTCAAGCTTAACCGATCTGTTCCCCTTGAAAAATTGGCTACTTTAATTCAAAGAGCTCCTCAATTGGAGGAATTGGGCACTGGTGGGTACACTGCAGAAGTCCGACCAGATGTTTATTCTGGTTTATCTGTAGCGCTCTCTGGATGCAAGGATTTGAAGTGCTTATCTGGATTTTGGGATGCTGTTCCTGCCTATCTTCCAGCTGTTTATTCAGTTTGCAGTCGGCTTACAACTTTGAATCTGAGTTATGCAACAGTCCACAGCTATGATCTTGTCAAGCTACTTAGTCAATGCCCAAAACTGCAGCGCCTCTGGGTGAGTCCATTTTAACATACAATTTAACGCATGAGTTTTGAAAATTTTAGGTCATTTTACTGTATGGTATAGTTTTCTTATTATAACTGTGATCTGACAGACGAAAAAAAAAAAAAAAAAAAAACTGTGATCTGACTTATTATTGACTACAGGTGCTTGACTACATTGAGGATGCTGGTCTTGAGGTGCTTGCTTCAACCTGCAAGGACCTACGCGAGCTGAGGGTGTTTCCGTCTGAGCCTTTTGTCATGGAACCAAATGTGGCATTGACGGAACAGGGGCTTGTCTCCGTCTCCATGGGCTGTCCAAAACTCGAGTCGGTTCTCTACTTCTGCCGTCAAATGACCAATGCTGCATTGATAACCATTGCTAGGAACCGTCCCAACATGACTCGCTTCCGCTTGTGCATCATTGAGCCAAAAGCTCCAGACTATCTGACTCTAGAGCCACTGGATGTTGGATTTGGAGCCATAGTAGAGCACTGCAAAGATCTCCGTCGCCTCTCTCTATCTGGCCTCTTGACCGACAAGGTTTTTGAATACATTGGGACATATGCCAAGAAGATGGAAATGCTCTCAGTGGCATTTGCAGGAGACAGTGACTTAGGCATGCATCATGTTTTGTCGGGGTGCGATAGCCTGAGGAAACTAGAGATAAGGGACTGCCTGTTTGGAGACAAGGCGCTTTTGGCCAATGCTTCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCTTCTTGTTCCGTGAGTTTTGGAGCCTGCAAGTTATTAGGACAGAAGATGCCAAAGCTGAATGTGGAAGTCATCGATGAACGGGGTCCACCGGACTCGAGACCAGAGAGCTGCCCTGTGGAGAGAGTGTTCATTTACCGAACAGTGGCAGGTCCTCGGTTTGACATGCCTGGCTTCGTCTGGAACATGGACCAAGACTCAACAATGAGGTTTTCCAGGAAAATCATCACTACTAACGGATTATAAGACAAATAAACGAGGTACATTTTTCATTAATCCTTGTTCATCATCCCATATAATCGTGTTCCGGTTTAGGAACATGAGAGAGCTCTCGGTCGCCAATAATTTGATTCTAGGCTGCTTCATATAACCATCAAGCTCATGAGCAATGAATAAGTGGAGAGAGAGAGAGATCTAAGAGAGCTTTGTTTTATTTATGTAAGAATTTTTTATTGTTGTATGTTTGTTTACACTGAGAGATCCTGGTGGGGTATTTTTCTTAAGAGGATAAGAGATTTTTTAAAAGACAATGTCAAAAATGTAACTGTTCTCTTGTTTGGACTCTTTTATCCTTTTAATTGTTTGATATCTCTCTCTTTGTTGTCTTTGCCATTCCTTTGTCCGCTTAATGAACTGATTGCAGCCTT
CDS Sequence
- >HanXRQChr16g0528711
ATGCAGAAGCGAATAGCCTTGTCGTTTCCAGAAGAGGTGCTTGAGCATGTATTCTCGTTTATTCAGCAGGATAAGGATAGGAACTCGGTCTCTCTGGTGTGCAAGTCATGGTACGAGATCGAGCGTTGGTGCAGGAGGAAAGTCTTCATCGGGAACTGTTACGCCGTGAGTCCAGCGACGGTGATTAGGAGGTTCCCGAAAGTGAGATCCGTGGAGCTCAAGGGGAAACCTCACTTTGCTGACTTTAATTTGGTACCCGACGGATGGGGAGGTTACGTGTATCCATGGATTGAGGCCATGTCGTCGTCTTACACGTGGCTTGAAGAGATAAGGCTGAAGAGGATGGTGGTGACCGACGATTGCTTGGAGCTCATAGCCAAGTCCTTTAAGAATTTCAAGGTTCTTGTGCTTTCTTCCTGCGAAGGCTTCTCCACCGATGGTCTCGCTGCTATCGCTGCCACTTGCAGGAATCTGAAAGAGCTTGATTTACGCGAGAGTGAGGTTGACGATGTTAGTGGCCATTGGCTTAGCCATTTCCCAGATACTTACACATCTTTGGTATCACTCAATATCTCTTGCTTAGCATCTGAGGTCAGTTTTTCTGCTCTGGAAAGGCTGGTGACTAGGTGTCCCAATCTCAAGTCTCTCAAGCTTAACCGATCTGTTCCCCTTGAAAAATTGGCTACTTTAATTCAAAGAGCTCCTCAATTGGAGGAATTGGGCACTGGTGGGTACACTGCAGAAGTCCGACCAGATGTTTATTCTGGTTTATCTGTAGCGCTCTCTGGATGCAAGGATTTGAAGTGCTTATCTGGATTTTGGGATGCTGTTCCTGCCTATCTTCCAGCTGTTTATTCAGTTTGCAGTCGGCTTACAACTTTGAATCTGAGTTATGCAACAGTCCACAGCTATGATCTTGTCAAGCTACTTAGTCAATGCCCAAAACTGCAGCGCCTCTGGGTGCTTGACTACATTGAGGATGCTGGTCTTGAGGTGCTTGCTTCAACCTGCAAGGACCTACGCGAGCTGAGGGTGTTTCCGTCTGAGCCTTTTGTCATGGAACCAAATGTGGCATTGACGGAACAGGGGCTTGTCTCCGTCTCCATGGGCTGTCCAAAACTCGAGTCGGTTCTCTACTTCTGCCGTCAAATGACCAATGCTGCATTGATAACCATTGCTAGGAACCGTCCCAACATGACTCGCTTCCGCTTGTGCATCATTGAGCCAAAAGCTCCAGACTATCTGACTCTAGAGCCACTGGATGTTGGATTTGGAGCCATAGTAGAGCACTGCAAAGATCTCCGTCGCCTCTCTCTATCTGGCCTCTTGACCGACAAGGTTTTTGAATACATTGGGACATATGCCAAGAAGATGGAAATGCTCTCAGTGGCATTTGCAGGAGACAGTGACTTAGGCATGCATCATGTTTTGTCGGGGTGCGATAGCCTGAGGAAACTAGAGATAAGGGACTGCCTGTTTGGAGACAAGGCGCTTTTGGCCAATGCTTCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCTTCTTGTTCCGTGAGTTTTGGAGCCTGCAAGTTATTAGGACAGAAGATGCCAAAGCTGAATGTGGAAGTCATCGATGAACGGGGTCCACCGGACTCGAGACCAGAGAGCTGCCCTGTGGAGAGAGTGTTCATTTACCGAACAGTGGCAGGTCCTCGGTTTGACATGCCTGGCTTCGTCTGGAACATGGACCAAGACTCAACAATGAGGTTTTCCAGGAAAATCATCACTACTAACGGATTATAA
Protein Sequence
- >HanXRQChr16g0528711
MQKRIALSFPEEVLEHVFSFIQQDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESEVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRSVPLEKLATLIQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKDLKCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVHSYDLVKLLSQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDVGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCLFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGPPDSRPESCPVERVFIYRTVAGPRFDMPGFVWNMDQDSTMRFSRKIITTNGL