Information report for g05188
Gene Details
Functional Annotation
- Encodes a floral inducer that is a homolog of FT. Plants overexpressing this gene flower earlier than Col. Loss-of-function mutations flower later in short days. TSF and FT play overlapping roles in the promotion of flowering, with FT playing the dominant role.TSF sequences show extensive variation in different accessions and may contribute to quantitative variation in flowering time in these accessions. TSF has a complex pattern of spatial expression; it is expressed mainly in phloem and expression is regulated by daylength and vernalization.;E9 gene 1, Flowering locus T gene 2a, Flowering locus T-like gene 3
- Encodes a nuclear localized protein with similarity to transcriptional regulators. Recessive mutants are late flowering. Expression of LFY is reduced in LD mutants.
- CDF4 is member of the group II DOF transcription factor family is involved in regulation of differentiation root columella cells. It is a direct target of the transcriptional repressor WOX5. CDF4 itself is a transcriptional repressor that appears to repress root columella stem cell identity. Ectopic expression of CDF leads to premature differentiation of root columella cells.
- Light-labile cytoplasmic red/far-red light photoreceptor involved in the regulation of photomorphogenesis. It exists in two inter-convertible forms: Pr and Pfr (active) and functions as a dimer.The N terminus carries a single tetrapyrrole chromophore, and the C terminus is involved in dimerization. It is the sole photoreceptor mediating the FR high irradiance response (HIR). Major regulator in red-light induction of phototropic enhancement. Involved in the regulation of de-etiolation. Involved in gravitropism and phototropism. Requires FHY1 for nuclear accumulation.;Phytochrome A gene 2;Encodes photoreceptor phytochrome A
Homologous
- Brassica napus: BnaC02G0200600ZS, BnaA02G0156900ZS, BnaFT.A02, BnaFTA2, BnaC04G0181400ZS, BnaA07G0282700ZS, BnaC06G0323800ZS, BnaA07G0365100ZS
- Brassica oleracea: Bo2g051350, Bo6g099320, Bo4g061100
- Brassica rapa: Bra022475, Bra004117
- Gossypium hirsutum: Gohir.D08G248000, GhSFT, Gohir.A08G227700
Sequences
gDNA Sequence
- >g05188
GTATCAGCATCACTTTATTTTTCTTATTACATAGACGTGTAGATGCTTAAATATCTCATTAGGGAACATTGCGATATACGAATGGATTATTAGTTAAAGTAAGTAGGCATCTACGTTATTCTTCCTCCACAGCCATTCTCCCTCTGGCAATTGAAGAAAGTTGCAGCCACAGGAAGACCAAGATTGTAGATCTCAGCAAACTCACGAGTGTTGAACTGTTGGCGCCACCCGGGTGCATAAACCGTTTGTCTTCCGAGTTGCCGGAACAATACCAACACAATACGGTGAATTCCTGAGGGTGGACGTGGACTCTCGTAGCACACCACTTCATTGCCTGATAAATAATCATAAACACACGTATTAGGCTATTAGCCCTACAATAAAAGGTGTTTTTGTCGCTTATTTTATATAGATTAACTAAAGCTTTGATGGTTGCAACGGACATATAAAGCAGACTATATAAACCGCTTTAGGTTTGTGATAACATGGAACATACTAATATATCTTCTTAAAATATGTTTTGCAGCATAAAGTAACTTATGTTTGTTTATGAATGCTCCATGACACTATTCAAAGCCTAAGCTTGTTGATTAATAATTGTATATATGCATGTATGAGTTTATCTATCTTCATATATATGTACCTATTGTATCTATAGAGTTTTTTTTTTTTTTTTAATACTTACCATTGATAATAGGCCCAAAAAACTTGGAAACCTAGAATTACACAGTGTCTCCTAACAGAGTTTAATTAAACTTACCAAAGGCCGTTCCAGTTGTGGCAGGTATATCAGTCACCAACCTGTAACGAGAGTATATCCATTTAAGTTAAAGATGGTGCAACCAAATAGTTAAATGCGACTGAAAACAAAGCATGCATCAAAGTTTTTGAAAGTTTCGTCTAAAGCATGTAGAATGGTCAGACTATAAAGAATAGACGTTTTGTTGCGTGCAAGCTATGATATAACATGACACACTCTAAAACAGAAACTATCTCTGACCACCACAAAGTCATGTTCGGTACTTGTTTAAAGTCTCTCTGTAATTCATATAAAGAACATTTAATTGGATGTATATGTCCCCTTCTATTATTAGTAAAAATATAAAATACCGTTTTTTGTGTGTCACTTGAGATATGTATTGGATCTCTAAATTTTTAAGTGTATATATACTGTACCTATATTTTTTTCTTTAAATTGTGGGAATTCTAGATTTTCGGTCTATAATTTTTTCTAATGTATTTATTTATTACGAGTAGTAGTAGAATTATTATATTCGAACAAGAAATTTGAGGTTATCTATTTAATCACTAAAGTTATACTCCCTCCGTTTCAGTTTAGTTGTCATTTTAGGGTATAAATTTTGTTTCATAATAGTTGTCGTTTTAGGTTTTCAATGCAAATGTTTAGTGAAAATTCCAGTTTTATCCCTACTGTTTTAATGTTTTGGCCAATGAAATTTTTTATAAAATATATTAATAAAGGGTAAAACAGAAAATTTAATGATTTTCTTAATTTATGTGAAAAAACCTTAAACGACAACTAAAACGAAACGGAGGGAGTTAGTTATATGAAATGAAGAGAGATGATACAAACCAATGGAGATATTCTCGGAGGTGAGGGTTGCTTGGACTCGGCACATCTGGATCCACCATAACCTTTATTAAGCACGTCAACAACCGTATAAGAGAATATCGATTATGAAAATAGTAAAGCAATCAATAAAGAAAAGTAAAGACGAAGAAGCTTAAATTAGAATAAAGGTAATAGTTAAATTTTCCATAAATATAAGAGTATCTAGAACTAGAAATACTGGCCGGCTTGACTATTCAGATTCAAAAGTCGTTAAGATTAGGGTCAAATAAGATATTTATTACTTTCTTGATATTTATGCAAATTTAAAAGTGAATATAATATTCAAGTTAACCGTGTCTTGAACATGTACGTAATATATAATCCAGATTCAAATTTGATTTAAATAAAGTAAAATCAAACTAATAACAATTATGCATGCATTCAATATCAGGTGTGTAGATGAGGCTACGAGAGAAAAGAATTATCAAACTACTTACAGTTAAGTTTGGATTTGAAAAAATATTGATAGTTTCATGAAGAAAAGTGAAAATAAAACATTGGGTTTTTAATTTGAATATCTAAGGTTAATTTCTTCGACAATGGACGTTAGTAAGAAAACAAAAGAGTTAGCTAGGAAGAATTAAGCAGTGAAGAAAACAGGAAGGAGAAGAACCAAGGTGTAGAAATTTCTGAAGTCGTCTCCTCCAATATCCACTGTTGGTTTGTTCAGAACTTGAGAGGGCCTTAGATCCAAGCCATTAGTAACCTCTCTTTGGCCATAAGTGACCCGAAGAGAGACCAATCTCGTGAAAGGATCAAGAACATCTCCAACAACACGTCCCACCACAAGAGGATCTCTACGACTTAAAGACATATATTTTGGATCTCAGGTCTCAGTGTTTGCTTCTTACCTTAT
CDS Sequence
- >HanXRQChr16g0518831
ATGTCTTTAAGTCGTAGAGATCCTCTTGTGGTGGGACGTGTTGTTGGAGATGTTCTTGATCCTTTCACGAGATTGGTCTCTCTTCGGGTCACTTATGGCCAAAGAGAGGTTACTAATGGCTTGGATCTAAGGCCCTCTCAAGTTCTGAACAAACCAACAGTGGATATTGGAGGAGACGACTTCAGAAATTTCTACACCTTGGTTATGGTGGATCCAGATGTGCCGAGTCCAAGCAACCCTCACCTCCGAGAATATCTCCATTGGTTGGTGACTGATATACCTGCCACAACTGGAACGGCCTTTGGCAATGAAGTGGTGTGCTACGAGAGTCCACGTCCACCCTCAGGAATTCACCGTATTGTGTTGGTATTGTTCCGGCAACTCGGAAGACAAACGGTTTATGCACCCGGGTGGCGCCAACAGTTCAACACTCGTGAGTTTGCTGAGATCTACAATCTTGGTCTTCCTGTGGCTGCAACTTTCTTCAATTGCCAGAGGGAGAATGGCTGTGGAGGAAGAATAACGTAG
Protein Sequence
- >HanXRQChr16g0518831
MSLSRRDPLVVGRVVGDVLDPFTRLVSLRVTYGQREVTNGLDLRPSQVLNKPTVDIGGDDFRNFYTLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTAFGNEVVCYESPRPPSGIHRIVLVLFRQLGRQTVYAPGWRQQFNTREFAEIYNLGLPVAATFFNCQRENGCGGRIT