Information report for g05047
Gene Details
Functional Annotation
- Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sYFP:OTS2 protein accumulates in nuclei in a punctate pattern. Double mutant analysis with ULP1D/OTS1 indicates that these genes are involved in salt stress responses and flowering time regulation.
- Relative of Early Flowering 6 (REF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a positive regulator of flowering in an FLC-dependent pathway. REF6 mutants have hyperacetylation of histone H4 at the FLC locus. REF6 interacts with BES1 in a Y2H assay and in vitro. REF6 may play a role in brassinoteroid signaling by affecting histone methylation in the promoters of BR-responsive genes. It is most closely related to the JHDM3 subfamily of JmjN/C proteins.
- DNA-binding bromodomain-containing protein, interacts with core SWI/SNF complex components.
Homologous
- Brassica napus: BnaC05G0084200ZS, BnaA06G0067900ZS, BnaA09G0168500ZS, BnaC09G0188000ZS
- Brassica oleracea: Bo5g012030, Bo9g044180
- Brassica rapa: Bra019923, Bra027164
- Cucumis sativus: CsGy5G022240
- Medicago truncatula: Medtr8g064470
- Musa acuminata: Ma06_g04850
- Nicotiana attenuata: A4A49_06464
- Solanum lycopersicum: Solyc04g026200.3
- Vitis vinifera: VIT_01s0026g00090
Sequences
gDNA Sequence
- >g05047
GTCATGCTCCTTATTTATTACAGGACTTGAACAAAATGATCGGTTAACAAAAAACGTATCTTTCATTTCATTTCTTAATTAGGGTGACCAAACTTGACACTGTTCTATACAGCATTAATCTGTTTGATTACCCTTGCGGAATAGATCAACGAGTAAGTTCCAGATTTTGATCCTCAAAGCGGAAGCTTCTTCGGGTTTAAACCACTTCTTGTGAATCTGGAGATCAAGACAAGACAACAAGTTGTGTTAAGAACAATTGTTTAGAATAGACCACAGAAGACGAAGATGGAAGAAAAACACACCATTTTCAAATCCTGCAATTTCAGCCTTTGAGGAGCCTCTTCGATGAAACGTCTTATGAAGAAGAGCACAAACAGACCACAGTCGAAATCATTCTTCTGTTGTGGAACCTGAGAAGGTGATGAAATAATAGATGAATACTATAAGTTGTCTTTAAATACTATATATTGTAAACGTAAGAAGTGAAAAAGACTAGCCTGCACTTCAGCTTCGTTGATCATATTGGGAAGGTCTTTCCATACTTTTGCTGAAATTGGTAAATCCAATGGAGCATCTTGATTTAGATAGTTCCATTCCTCTCTCAGAAATCTGCAACAATATAGTGAAGATGGTCTTACCACTCTGATTATGCAATCAGCATCAAATCATTGGTACGGATTCCTTGGGTCTCACCTTTTGACATTATTAAAAATCAAACTTCTTGGGTGAAGTCCCAATGAATCCAAGTGAATTATAGTCAATCCCGATTCGTCCTCCTCGTCTGGGATGCAAATTATTATTAAGCTCCAGTGGAGACTGAAACATCCAAGAGGAAAAAAAAAACATTAACCAATCTAACAATTGATGCTGAGAACATTTCTCCATAAGAAAGAGCAGACTGAGATGTGATAACTCTGATCTTAGATAGCATCTTTTTCCATAATCTTCTAAGCTTAGATGACAAAAATTACTCTTCAAGCCAAAAAAAATGCAATCATAGGATTCAATAGAAAACAGTCACAAAATTACGTACTCTTCATGTATCGGTATAAATATATATGATTTACAGAAAAGATCAAAACCCTTCCACCACCGCCTGAACTTCACAAAATATGCATCCTTGTCGTTACCCTAATCATATTGAAAAGACAAGACAAAGAGACCAAACAACACATGAGTAGCCAAGAAGAAAATTATGTTAATCACAAGATTCAAAAATGAGGTAGTATTATCATTTTCTCTCAATTCTTGTTACAATTGCACATGAAATATTTAGACTCAACCTTCTATAATAGAACAATGAAACTTAAAGCATCTCGAGGACTTGAAATTTTTTGAAATGCAAACCAAACATAATGAGCTCAAAGCCATCATAGAAACCAGGGAAAACAATCACCTTGTACGAAACAGCTTCTATGAGCTTCTTGTAGAAAAACGTATTGAAGAAATGACAATTCGCAGCTGTCTCATCCGCTGAAAACACGTGATGTTGCAAGAACCTAGTCAAACAGAAGCTGAAATTATCACAAAGCTATAACTCGAGATATTTAATGCAAGTATGCAAGTCGGTACTTAAAAGTCACCTGATGTAGAAATTTATAACTGGCGATGTAAGATATTCCCCAGGTGAAAGGCATTTCAAATCTTTAAGAGATACTTGAACAAGGTCTCGCCCATCACTTTGATCACTAGATGAAGTGGAAAAAAGGTCATATATCTAATTGACGATTACAATAAGTAAACCTACACCAACAACATAGTAGTTTTTCTACCTACCTTGATGGGTAGTAAATATCTTCAGGTAACCTGCAGATTTTACCAAAATTAAGTTATCTCCAACAAGAAAGATTCAGTCACTTGATGAAGATAAACAGTAATAACTCTGTTTTTACCCTTCAGGAAGTTCACATGCTTCCTCTACTACCATTGGAGACTGAGGTTCATCTTCGTCCAAATTAATCACTTTATCATCTGATTTCTATAACAAAAATGTCAGAGAGGGTGCGAAGGTCCTTGTTTTAATGTACAATTGTATGGCATAAGATGACATACCTTCCTGCAGCTTGAACTCTGTGATGGCGACGCTTTCGAACTCCACTCCCTGTGAGAGAAAGAAATAAGGATATGTCCATACAATGAATTCTCTTCAGAACGATAGGTGTGGTTTGAAAAGTGAAAGTTAGCCAGGACCACATGGTGTGGCATAAATGGCAGTAACTAAGTCATTTTGAACTTGAAAAGACATGAAAAACAATTTATGGAGCAGTCGCAGGGAGAAAAGATATGGACCTGGGAGTTTCATAGCCAACGACATCATCGTCATCATCATCATCAACAAGTAAGTAAGGGGAAGATTCCTTTGGCTTTCCCTTACCATAAGCTTCATTGGGTTTTCGAACCCCTTTTGGATCCTTAGATTCAGAATAAAAGTTCTTTTCACTGACCTTACACTTGCTCAATTTTGGCAGCGACCGCCACCCATTACTTTTCTCTATTATTGAGTCTCTATTTGATTTGCTTTTCCAGCTTCCACGTCCCAAATCTTGCAGTTTGTCATTAAATAGTTTCACTGATTGAGCTCCCGTCTGTTAAACAAGGATTATTAAGAAGCAGCTACCTATAAGAGTTTAAACAACACTACAACAGAGAACGAAAAAAACACCATACTTTAGGATTGTCACTAAAATGAGCAGCAAATGTTGACCGAGACACGTCTTTCGATCCCGTATTCCCTTGTCCAGAGGTGTCTTTTGAGGCTGTACTCGCGCGCATAAACACATCTGGAAAAAAATTACATGTTAAACACAAACTTTTGCACTCAACACCAACATTAGCTAAGACAAACTTGCAACAAGATACCTGAGCTTTTAGGTTGCTCAAGAATCTGACATCCAGTGTCCGCTTCCTGCTAAAATATGGTAAAGTCACATGGATTGTATCAGATCAATTCATATAATTTTGCCTAAACAGAGATTGTGACAGAGGATTACACATCCATAAGTAAAAAAAAACAGATACCAAACAAAATCAAGACTATACTAAACAAGTGAAAATGTAAAACAAAAGAGAAGCTTTAGCAGAATATTGAACCAATCAAAGCACACAACCACTGATCCTCCTAACACATAGTACATTATCTTGCACACATCATCAAACTCTAAATTCCACTGCACAATTAACTTCAGCTACATATATAGAGAACACAAAAGATTTCATTTGAGTCACAATCAAACACAGAATGCTGCAATTGCAGAGTAAAAAAAGACAAAACCATTTTGGTCCGTTGTTGGAACATCCTTCGCTGCTTCTCGTACTCGAGGTCTCCGATTCTGTTTCGGATTTTCTCGCCCTTATCTGGCAACTTATCACCGAGACGAGTAAGAAGTGATCTCTGACGCTTCAGATGATCGTCGAGTTCGTTATCCCTGAGGGATCGCACGCAGACGGCGGGTTCATCGCCGGAAAGAGTAGGCTCACGCGGGGGAATTTTGTCAGTTGCGATGATCTCGAGCTCGGGAACTTCTTCTTCACCCAAAGCATCGTCCCAATCTATGTTGAACTTTGTTGTCTTCTCCACACGATCTAACTCAATTACTCTTTGTCTCTTCATCTTTTCATCGAATAAAACTACTCGATATAATTTAGGTTTTGGTCTAGAATTCTCCTGGCTATTTTCATCGCC
CDS Sequence
- >HanXRQChr16g0504791
ATGAAGAGACAAAGAGTAATTGAGTTAGATCGTGTGGAGAAGACAACAAAGTTCAACATAGATTGGGACGATGCTTTGGGTGAAGAAGAAGTTCCCGAGCTCGAGATCATCGCAACTGACAAAATTCCCCCGCGTGAGCCTACTCTTTCCGGCGATGAACCCGCCGTCTGCGTGCGATCCCTCAGGGATAACGAACTCGACGATCATCTGAAGCGTCAGAGATCACTTCTTACTCGTCTCGGTGATAAGTTGCCAGATAAGGGCGAGAAAATCCGAAACAGAATCGGAGACCTCGAGTACGAGAAGCAGCGAAGGATGTTCCAACAACGGACCAAAATGCTGAAGTTAATTGTGCAGTGGAATTTAGAGTTTGATGATGTGTGCAAGATAATGTACTATGTGTTAGGAGGATCAGTGGAAGCGGACACTGGATGTCAGATTCTTGAGCAACCTAAAAGCTCAGATGTGTTTATGCGCGCGAGTACAGCCTCAAAAGACACCTCTGGACAAGGGAATACGGGATCGAAAGACGTGTCTCGGTCAACATTTGCTGCTCATTTTAGTGACAATCCTAAAACGGGAGCTCAATCAGTGAAACTATTTAATGACAAACTGCAAGATTTGGGACGTGGAAGCTGGAAAAGCAAATCAAATAGAGACTCAATAATAGAGAAAAGTAATGGGTGGCGGTCGCTGCCAAAATTGAGCAAGTGTAAGGTCAGTGAAAAGAACTTTTATTCTGAATCTAAGGATCCAAAAGGGGTTCGAAAACCCAATGAAGCTTATGGTAAGGGAAAGCCAAAGGAATCTTCCCCTTACTTACTTGTTGATGATGATGATGACGATGATGTCGTTGGCTATGAAACTCCCAGGGAGTGGAGTTCGAAAGCGTCGCCATCACAGAGTTCAAGCTGCAGGAAGAAATCAGATGATAAAGTGATTAATTTGGACGAAGATGAACCTCAGTCTCCAATGGTAGTAGAGGAAGCATGTGAACTTCCTGAAGGGTTACCTGAAGATATTTACTACCCATCAAGTGATCAAAGTGATGGGCGAGACCTTGTTCAAGTATCTCTTAAAGATTTGAAATGCCTTTCACCTGGGGAATATCTTACATCGCCAGTTATAAATTTCTACATCAGGTTCTTGCAACATCACGTGTTTTCAGCGGATGAGACAGCTGCGAATTGTCATTTCTTCAATACGTTTTTCTACAAGAAGCTCATAGAAGCTGTTTCGTACAAGGGTAACGACAAGGATGCATATTTTGTGAAGTTCAGGCGGTGGTGGAAGGGTTTTGATCTTTTCTGTAAATCATATATATTTATACCGATACATGAAGATCTCCACTGGAGCTTAATAATAATTTGCATCCCAGACGAGGAGGACGAATCGGGATTGACTATAATTCACTTGGATTCATTGGGACTTCACCCAAGAAGTTTGATTTTTAATAATGTCAAAAGATTTCTGAGAGAGGAATGGAACTATCTAAATCAAGATGCTCCATTGGATTTACCAATTTCAGCAAAAGTATGGAAAGACCTTCCCAATATGATCAACGAAGCTGAAGTGCAGGTTCCACAACAGAAGAATGATTTCGACTGTGGTCTGTTTGTGCTCTTCTTCATAAGACGTTTCATCGAAGAGGCTCCTCAAAGGCTGAAATTGCAGGATTTGAAAATGATTCACAAGAAGTGGTTTAAACCCGAAGAAGCTTCCGCTTTGAGGATCAAAATCTGGAACTTACTCGTTGATCTATTCCGCAAGGGTAATCAAACAGATTAA
Protein Sequence
- >HanXRQChr16g0504791
MKRQRVIELDRVEKTTKFNIDWDDALGEEEVPELEIIATDKIPPREPTLSGDEPAVCVRSLRDNELDDHLKRQRSLLTRLGDKLPDKGEKIRNRIGDLEYEKQRRMFQQRTKMLKLIVQWNLEFDDVCKIMYYVLGGSVEADTGCQILEQPKSSDVFMRASTASKDTSGQGNTGSKDVSRSTFAAHFSDNPKTGAQSVKLFNDKLQDLGRGSWKSKSNRDSIIEKSNGWRSLPKLSKCKVSEKNFYSESKDPKGVRKPNEAYGKGKPKESSPYLLVDDDDDDDVVGYETPREWSSKASPSQSSSCRKKSDDKVINLDEDEPQSPMVVEEACELPEGLPEDIYYPSSDQSDGRDLVQVSLKDLKCLSPGEYLTSPVINFYIRFLQHHVFSADETAANCHFFNTFFYKKLIEAVSYKGNDKDAYFVKFRRWWKGFDLFCKSYIFIPIHEDLHWSLIIICIPDEEDESGLTIIHLDSLGLHPRSLIFNNVKRFLREEWNYLNQDAPLDLPISAKVWKDLPNMINEAEVQVPQQKNDFDCGLFVLFFIRRFIEEAPQRLKLQDLKMIHKKWFKPEEASALRIKIWNLLVDLFRKGNQTD