Information report for g04145
Gene Details
Functional Annotation
- Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP family of genes. Component of chromatin remodeling complexes, involved in chromatin-mediated gene regulation. Phenotype of the arp4-1 mutant allele revealed partial sterility due to defects in anther development. Targeting the distinct, 3’ UTR of AtARP4 transcripts with RNA interference caused a drastic reduction in the level of AtARP4 protein expression, and resulted in strong pleiotropic phenotypes such as altered organization of plant organs, early flowering, delayed flower senescence and high levels of sterility. Western blot analysis and immunolabelling demonstrated a clear correlation between reductions in the level of AtARP4 expression and severity of the phenotypes.
- Encodes a protein with similarity to yeast Pfs2p, an mRNA processing factor. Involved in regulation of flowering time; affects FCA mRNA processing. Homozygous mutants are late flowering, null alleles are embryo lethal.
Homologous
- Actinidia chinensis: CEY00_Acc26610, CEY00_Acc21854
- Brassica napus: BnaA06G0126600ZS, BnaC05G0154800ZS, BnaA08G0257100ZS, BnaC08G0245900ZS
- Brassica oleracea: Bo5g025450
- Citrullus lanatus: Cla97C06G124430
- Cucumis melo: MELO3C017295
- Daucus carota: DCAR_011346
- Glycine max: Glyma.03G107300, Glyma.07G118800
- Juglans regia: Jr15_09460
- Manihot esculenta: MANES_01G012800
- Musa acuminata: Ma08_g18590
- Prunus persica: PRUPE_4G154200
Sequences
gDNA Sequence
- >BVRB_2g041450
TCAACAAAGTCGTTGTAGTATAGTGGTAAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCGCATATCTTTTTATATTTTAGTCCCTTTGTTTTCAGTTTCTTTAGTTTTAGTCCCTCGCATTTCAGGCTTTTCGTTTTAGTCCTTCTCTTCGTTCTTAAACCTTCCGACGAAGCTCCGGTAGAGAAAACCTCTCCGCCTCTCGCATTCTCCGCAGCCATGTTCTTTTCGCTTGAGTTCGTCTCGTCAAGGTCTAAACTTTTCCTTGGTGGGTTTTGTATCTATTGAACAGCTGAAGTGTCAGCCATCGTAGTTGACTTAGGTTCACACACTTGCAAAGCTGGTTACGCCGGAGAAGATGCCCCTAAAGCCGTTTTCCCTTCCGTAAGTCTCGTTGTTCACTTCCTCTCTTTGCAATTGGTTTTATTTTTCTTAAAGTTAGGTCCTTTTAGTGTAGAGCAAGCAATTCGATAAATTTAGTTTATTTTTTGTTGTTGCTGTTGTTGATAAATTCGATATAGATGGAAATGGAATGGATATTGATGATGCTGCAAACACCACGGAGGATACAAAGGATTCTGATAAAGAAAAGGGCAAAAGGAAGCTTTACGTAGGATCTCATGCTTTGAATTTTCGCCGCGATCAAATGGAGAAAAATATTGGTTTCCTTGGCCTCTCATCTGCCATTAATAAGCATAAGTCGCTTGATACTGATGTCTTATTACCCGTTTCATGACAAAACTTTTATTCACAGGCTGTCGTATCATCTCAAATTGGAGGAGATTTTCTCACTGATTGCTTATTGAAAAGCTTAGAGAGTAAAGGGATTAAAGTAAGTTACAACCATTGTCACACTGTTCTGGAGCCAATTCATTTGATCATTACTAATTCCTTCTTTTGCAGATAAAACCTAGATACTCTTTTAAGAGAAAGGAAATACGACCAGGAGAATTTCAGGTAATTCCGTGCTTTGCGTTGCAGATATGTTTAAAACTGTGGCTTCGTGTTTATCATCTGACAGAGAGAGTCATATGGTCAGAGAGAGTCATATGGTTTTCAGAATAAATTTGTATTTTATTGGTACAGTATCATTTTATTGGCAATGAAACAAAGCAAACATAAGATTTATCTCACTTCGTCCCTTTGTGTCCTTGCAGGTTACAGATGTAGAAGTTCCTGTTCCTGATACCACAGAAAAATTTAGGTCATCACACACTTTACATGTAAGGAAAATCATTTCCCTGCAATTGCTTGCTGCGTAGAAGACACAGGGACAAAGCTACGTGGAAGCAAAGGAAACAGTAGTTTGCTTAGTATTCCTGATATTATTAATTTTGTGTACAGACAAATCATATTCAAACATTCCAATGACGTCTTACGAGCTTCCTGATGGCCAGTAAGTTCCAATTTATCTGTTTATTGCTGTTATTTTTGCTTCAAATACAAATGCTATGGAGCATAAGTTTATATTACTGACAACTGCTATCTTTTACGTAGAGGCGACATATTCCACATTAACTTCTGCCTTGCAATGCAGGACACTGGAAATTGGTGCTGATAGATTCAAAGTTCCTGATGTTATGTTCAACCCTTCCATAGTTCAGGTTATTGTGCTAAATCCTGTAAACTCATCTCTACCAACTTGTTAGATCTATGTTGTTCTTGAGCTCCAAGTTGCCTCTGATTCTCAGTCAAAATATCTTTTTCCTTAAGTTCCCTCCTATTTTCTGTTGCAAATTACCAGACGATTCCTGGAATGGAAAATAACCCAGACATGCTTCA
CDS Sequence
- >BVRB_2g041450
ATGTTCTTTTCGCTTGAGTTCGTCTCGTCAAGGTCTAAACTTTTCCTTGCTGGTTACGCCGGAGAAGATGCCCCTAAAGCCGTTTTCCCTTCCGTAAGTCTCGTTGTTCACTTCCTCTCTTTGCAATTGGTTTTATTTTTCTTAAAGTTAGATGGAAATGGAATGGATATTGATGATGCTGCAAACACCACGGAGGATACAAAGGATTCTGATAAAGAAAAGGGCAAAAGGAAGCTTTACGCTGTCGTATCATCTCAAATTGGAGGAGATTTTCTCACTGATTGCTTATTGAAAAGCTTAGAGAGTAAAGGGATTAAAATAAAACCTAGATACTCTTTTAAGAGAAAGGAAATACGACCAGGAGAATTTCAGGTTACAGATGTAGAAGTTCCTGTTCCTGATACCACAGAAAAATTTAGGACACTGGAAATTGGTGCTGATAGATTCAAAGTTCCTGATGTTATGTTCAACCCTTCCATAGTTCAGGTTATTGTGCTAAATCCTGTAAACTCATCTCTACCAACTTGTTAG
Protein Sequence
- >BVRB_2g041450
MFFSLEFVSSRSKLFLAGYAGEDAPKAVFPSVSLVVHFLSLQLVLFFLKLDGNGMDIDDAANTTEDTKDSDKEKGKRKLYAVVSSQIGGDFLTDCLLKSLESKGIKIKPRYSFKRKEIRPGEFQVTDVEVPVPDTTEKFRTLEIGADRFKVPDVMFNPSIVQVIVLNPVNSSLPTC