Information report for fgenesh2_kg.8__389__AT5G44200.2
Gene Details
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Functional Annotation
- Encodes a nuclear cap-binding protein that forms a heterodimeric complex with ABH1 (ATCBP80) and is likely to participate in RNA metabolism. Its mRNA is ubiquitously expressed.Loss of function mutations suggest a role in processing of pri-miRNA and mRNA splicing.
Homologous
- Actinidia chinensis: CEY00_Acc22413, CEY00_Acc10010
- Beta vulgaris: BVRB_1g015470
- Brassica napus: BnaC07G0227300ZS, BnaA06G0437100ZS
- Brassica oleracea: Bo7g067210
- Brassica rapa: Bra033729
- Daucus carota: DCAR_018109
- Glycine max: Glyma.12G206400, Glyma.13G294500
- Gossypium hirsutum: Gohir.D02G177800, Gohir.A03G154800
- Juglans regia: Jr01_21620, Jr01_21600, Jr01_21610
- Musa acuminata: Ma11_g10030
- Populus trichocarpa: POPTR_017G014600v3
- Prunus persica: PRUPE_3G134700
- Sesamum indicum: SIN_1017231
Gene Resources
- Pfam: PF00076
- UniProt: D7MN19
- RefSeq: XP_002863606.1
- EMBL: GL348720
- AlphaFoldDB: D7MN19
- InterPro: IPR000504 , IPR012677 , IPR027157 , IPR034148 , IPR035979
- PANTHER: PTHR18847 , PTHR18847:SF0
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- CDD: cd12240
- eggNOG: KOG0121
- STRING: 81972.D7MN19
- HOGENOM: CLU_070952_0_0_1
Sequences
gDNA Sequence
- >fgenesh2_kg.8__389__AT5G44200.2
TAAGGTTTCGTAACGTGGGCCATGAAACCGGATACTCGAGAGTCGCCGGAGTGTCCTTGCTTCTTCTATCAGTTGTTCTGCTTCTCCTTTAGAAATTAGGGTTTTGGAGGAAGACGAGTAAGTGTCTCTCCGTCTCAATTTTGTCCTCATCTTCTTTTTTCACTCTGCATAACCTAATTTAAGCTATCACAATCCTCTCTCCTCATCGCAGATTCACTTCTTTTCACCGTGAAGCGATGGCTTCTTTGTTCAAGGTAACATAAAGTTTAGATTTTTGTCTGAACCCATTTCTGGGTTTTGCTTTTCGTATCATAGAAACTCGAGATTCGTTAGTATTTCTAGTGAATTTAGTATCTGGGCTGTCTAGGGTTTGGTCTTACGATTTGATTTGCTTTGTGCTGAAACTAGTTTCTTCGTGCATTTAGGCTTTCTAGGGATTTGTTTTGCATCTTTAGCGATTGGGTTAAGTTAAATTTTTCGTATTTGGGGTTTTTGATTGTCAGGAGCAAGCGAAGCTCTCGGCTTATCGAGATAGAAGATTTTCTGGAACACAAGAGGAGTTTGATGAGGCGTTAAGGGCATCTACAACGGTTTACATTGGCAATGTGTCTTTCTACACTACTGAAGAACAGCTTTACGAGCTTTTCTCTAGAGCAGGAGAAATCAAAAAGATCATCATGGGTTTGGATAAGAACACTAAAACACCTTGTGGCTTTTGTTTCGTCTTGTAAGTTTTCATTTTTCAACAGTTTTATATGTAAGTTTTATGATGGTGGTTGCTGAGTTTTGCTGTTGTGTGTTGTTTATCAGGTTCTACTCGAGAGAGGATACTGAAGATGCAGTCAAGTATATAAGTGGGACTATTCTGGATGATCGGCCTATTCGTGTGGATTTTGATTGGGGGTTCCAAGAAGGAAGACAATGGGGACGTGGTAGAAGCGGTGGCCAGGTATTCATCAGTTCCATCCTCTCTGTAATTTCCTGACTTTTGTATAAAAATTATGATGTTAATCATGGTTTTCTAATTTTCATACAGGTTCGAGATGAATACCGTACAGATTACGATCCTGATATCCTTTCAGTCCGAATTATAGCGCTCTCTGTTGTTCTTGTTTAGTAAACCTGTTTTGTGGTAGTAAAGATTGACTATCTTGATTTCTCGGTTATGAATTTGCCGCACATCCTTGTGTTGTTTCTTTAACTCATTGATTACCTAGAGGTGGTTATGGAAAATTAGTTCAGAAGGAACTTGAAGCACAAAGGCAGCTCGTGGATTACGGTACTGGCTCATTGGGAGCCTATCCTCAAGCTGCGCCATCAAATTGTATGTCCTTTTCAAAACTTTCTACCAAATTTACATTATCTTATTCATGGTTGCATGATTTTGCAATATACTGTGGACAAATGGTGAACTAAAAGCACCATGAATGTGAGTCTGAAGTTACTTTACTTAGAATTGTAGTGCTCAGAAGAAGACCTTGCGAAGCATCCACTTATTGTTTTTCCGGTTCCCTTTGGAATAGATAGTGAAAATGTGAAACAAGTTATGAATCCTAGTGTTAAGTAGCTTATTCAAGTCAAATCATGCGAGAACCCGTAAATAGAGCCTGCATAACATTAAGTTCCTAAATGCTTTTTGCATATGTTAATCACACAGATGGAAATGGAAGGCGTGGTGGTGGAAACTATGGTCAAGGAGGACCAAATCGCCATGGAAGAGGAGGAGGTATATTTTTCCCAAATGAGCATAATGCGTAGTAATAGTATAATCCTCAGCCACAATAGCACAATTCACTGTTTTTAATTTTTTGCAGACTATCATCGGAAACGACAAAGAGACGACGATCGCTATGGCCGTGATAACTCAAGAAGAAACACAGATCATGAGTCTAGGAGAGACACTGATCATGATATGAGACCGGTAATTAACACAACTTCTTTTTTCCGTAACAAACTTTTTGAGTATCTGATTCTAAAAAATTGTCTGCTATGGAATTTTGGTGATTGTAACAGGAGAAGAACCCACGTTTCCGTGAGAGCGGTGACTCCGATGATGATGGTGAAGATGATCGGAAGAGAAGATCTTAAAACAAACTTAGCAGCTACCAATGTTCTTGAAGGATCAATGTAATCTTTAGACTGATGAGTATGAACTCAGTTTGGGTTTTCTAGATTTTCATTACAAACTTTCTTAAGTTGGTTTCATTCAAATATCAATGTCCTAATGTAACTTTTGCTCCTTGATCAAC
CDS Sequence
- >fgenesh2_kg.8__389__AT5G44200.2
ATGGCTTCTTTGTTCAAGGAGCAAGCGAAGCTCTCGGCTTATCGAGATAGAAGATTTTCTGGAACACAAGAGGAGTTTGATGAGGCGTTAAGGGCATCTACAACGGTTTACATTGGCAATGTGTCTTTCTACACTACTGAAGAACAGCTTTACGAGCTTTTCTCTAGAGCAGGAGAAATCAAAAAGATCATCATGGGTTTGGATAAGAACACTAAAACACCTTGTGGCTTTTGTTTCGTCTTGTTCTACTCGAGAGAGGATACTGAAGATGCAGTCAAGTATATAAGTGGGACTATTCTGGATGATCGGCCTATTCGTGTGGATTTTGATTGGGGGTTCCAAGAAGGAAGACAATGGGGACGTGGTAGAAGCGGTGGCCAGGTTCGAGATGAATACCGTACAGATTACGATCCTGCTAGAGGTGGTTATGGAAAATTAGTTCAGAAGGAACTTGAAGCACAAAGGCAGCTCGTGGATTACGGTACTGGCTCATTGGGAGCCTATCCTCAAGCTGCGCCATCGAATTATGGAAATGGAAGGCGTGGTGGTGGAAACTATGGTCAAGGAGGACCAAATCGCCATGGAAGAGGAGACTATCATCGGAAACGACAAAGAGACGACGATCGCTATGGCCGTGATAACTCAAGAAGAAACACAGATCATGAGTCTAGGAGAGACACTGATCATGATATGAGACCGGAGAAGAACCCACGTTTCCGTGAGAGCGGTGACTCCGATGATGATGGTGAAGATGATCGGAAGAGAAGATCTTAA
Protein Sequence
- >fgenesh2_kg.8__389__AT5G44200.2
MASLFKEQAKLSAYRDRRFSGTQEEFDEALRASTTVYIGNVSFYTTEEQLYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWGRGRSGGQVRDEYRTDYDPARGGYGKLVQKELEAQRQLVDYGTGSLGAYPQAAPSNYGNGRRGGGNYGQGGPNRHGRGDYHRKRQRDDDRYGRDNSRRNTDHESRRDTDHDMRPEKNPRFRESGDSDDDGEDDRKRRS