Information report for fgenesh2_kg.8__2435__AT5G64200.1
Gene Details
|
|
Functional Annotation
- encodes an SC35-like splicing factor of 35 kD localized to the nuclear specks.
Homologous
- Actinidia chinensis: CEY00_Acc11657
- Brassica napus: BnaC03G0533800ZS, BnaA06G0292700ZS
- Brassica oleracea: Bo3g101530
- Brassica rapa: Bra024276
- Glycine max: Glyma.08G072600
- Juglans regia: Jr16_20170
- Manihot esculenta: MANES_14G165400
- Musa acuminata: Ma05_g05110
- Prunus persica: PRUPE_1G516100
Gene Resources
- Pfam: PF00076
- UniProt: D7MR86
- RefSeq: XP_002866601.1
- EMBL: GL348720
- AlphaFoldDB: D7MR86
- InterPro: IPR000504 , IPR003954 , IPR012677 , IPR035979 , IPR051106
- PANTHER: PTHR48028 , PTHR48028:SF4
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- OrthoDB: D7MR86
- CDD: cd12311
- eggNOG: KOG4207
- STRING: 81972.D7MR86
- HOGENOM: CLU_012062_10_0_1
Sequences
gDNA Sequence
- >fgenesh2_kg.8__2435__AT5G64200.1
GAGATAAGTGAAACTCAACTGAACTTAGATTGAAAACTAAACGAGCCAGGCCCTTCTAAGTAAGCATTGGGCAACAAGTTAGAGACACAAAGATGCTACTATGTACGGAAGGGGAGTTTAAGCAGATTACTGTGACCAGCATCGAACATCTACGGTTTCATAAACAGCATCGATCATCTACAGTTTCATAAACAGCATCAACAGCTACAATCTCAACATGGTTGTGCCATCTTCCAAGTCAATTCTTTTCTCGAACCAGACTAGAAAAATCCAAGACAAGCCATGGGAATGGAGTTAGAATGCTATGAATTCCAAACCAAAGAAGATTCAAACAAACCATAGTCTAAAACGGCTGTTCAGACAGTAATAATCCTTGCACATAAACACTAAACCCGAAAGATAACAGGAAACAAAGATACAGTCAGTAGTTTGGGGGCACCTACGGAAAAGCAAGTAATACTACAGAGGGTAGACGTTCCAGTGCTTGATGATGAAACATCATCAGTACAAGCAAACGTGTTTTTCATACACCATGTCTCCTTCACAAGTGGCTGCAGTCATTCCTGCAAACAAAATGTAAACAAGCACAATTCAGACATCAAGTTTCATTCGTGATACACATCTGAAGCACTGTGTTTTTTTGTAACCCACCGCAGCATAAGGAGATTGACTTCGAGAAGCAGCATCAACTTTGCCCAGGGGAGAAGGGCTACCAGGAGACGGGGACCTCTCATTGCTACGCCTTTCAGGAGACACCTCCTTAGATGGAGAGGCCTTTTGCAAAGATGGGCTTCTTGGGCTGAGGCTGCGACGAGGAGATGGAGACCTCTCATTGCTACGCTTATCAGGAGAAACTTCTCTAGGAGGAGAGGTTTTTTGTGGGGAGGAACTTCTAGGGCTGAGGCCGTGGCGAGCAGGAGATGCACTGCATGTCAAAAAGTTGAAATCAGGATATTTTTACATAGTATTGTGGAGAAACAACATGAAAAAAGAGGTTCACAATGGAAGAAACCTCAAGGAGCGACTGTGACTGCGGCTCTCATCATCATAACGGCCTCTGACTCTGCGTTTGTCATCTGGGCTGGCACTACGAGACCTAGTTCGACGACGATGATCTCTATCCTTCTCCTGATGCCTTTCACGCCTCTCATAGCTTCTGCTCCTGCTCCTCTTCCGGTAGTCTTTTTCCCTGTAATCATCTCGGGACCTACAAGTTATGTAGCTCGATGAGAGAATTATTCAGACAAATACTGTTCTTGGGCTGAGATGGAGTTTCTTTGATGATTCAAGTAACAAAAGCTAGTTGAGTGATAGCATAACCATTATCTCCCACCGGTTCACCTAATCATGATAAAAATTCAGATTAAAAAAGAAACACACCTCCTACGAGGACTACGGCTTCTTCTCGGACTACGGCGTCTAGGCGGGCTACGGCTCCTCCGAGGACTACGACTCCTCCTAGGACTACGGCTTCTCGATCTTCGTGACTTTGGTGGTGGTTCCACAACCCTTCCTTTGGAACTGACATGAAAATTACAAACTAATCAAATACAATTACAGATGCAGCTTTTTACTGGATAGAAGTTCCAATAGCACAAAAAACGGAAATGATCTAAAGAGGAAACATTCATAGTGAGCTCCCGAATATCAAATAAGATCATTATTTATACAAGTAGGCCATGAGTTTGGAAGCTCAAAACCAATGGCAACAAAATTGAACAATCATTGGCAAAGAAAGAAGCATACATCTTTTCAGCATTTGGCCCATATTTCGCAAACTGAACAGTTATTTCTCGGCCATCGACAACTCTTCCTGAAACAGAGACAGAAACTTCATGTCAAATCCAAGCACCAAAAGCATAAACACATATAACAAAACCAATAATAGTGGATGAATCTTACCATCAAGCCTTTCCACTGCTTTGTGAGCTTCATCTTTATACTTATACCGAACAAACGCAAAACCACGCGAATCACCAGTCCTAAAAATCGACACAAGAATCAATAACAGAAATTAAGAAACCCTAATTTCTCAGTCGGAGAAGAAGAAGAAGAAATTGGACCTTCGATCTCTGGGAATAAAGACATCAACGACCTTTCCATACTTTGCGAATAGAGGATAGAGATCATCAGCAGTCGTACCTACACATAAGAACAAACCCTAATCTCTTAGAAACCCAGTTCACAAATATTGAAACGAGGTTTAGAAAAGGGATTGAGAGTTTACGGAAGGTTATGTTAAGGACGAGAAGCGAGTAGGTGTCGCTGATATCCGGTGGACCTGACCTTCCGAAGTGCGACATAGTTTTCCCGCCGGCGGAGAGACTGGGAGAGAGAGCAGAGCAAGTGAAATTAGGTCTATGAAACAATGGAATCTACT
CDS Sequence
- >fgenesh2_kg.8__2435__AT5G64200.1
ATGTCGCACTTCGGAAGGTCAGGTCCACCGGATATCAGCGACACCTACTCGCTTCTCGTCCTTAACATAACCTTCCGTACGACTGCTGATGATCTCTATCCTCTATTCGCAAAGTATGGAAAGGTCGTTGATGTCTTTATTCCCAGAGATCGAAGGACTGGTGATTCGCGTGGTTTTGCGTTTGTTCGGTATAAGTATAAAGATGAAGCTCACAAAGCAGTGGAAAGGCTTGATGGAAGAGTTGTCGATGGCCGAGAAATAACTGTTCAGTTTGCGAAATATGGGCCAAATGCTGAAAAGATTTCCAAAGGAAGGGTTGTGGAACCACCACCAAAGTCACGAAGATCGAGAAGCCGTAGTCCTAGGAGGAGTCGTAGTCCTCGGAGGAGCCGTAGCCCGCCTAGACGCCGTAGTCCGAGAAGAAGCCGTAGTCCTCGTAGGAGGTCCCGAGATGATTACAGGGAAAAAGACTACCGGAAGAGGAGCAGGAGCAGAAGCTATGAGAGGCGTGAAAGGCATCAGGAGAAGGATAGAGATCATCGTCGTCGAACTAGGTCTCGTAGTGCCAGCCCAGATGACAAACGCAGAGTCAGAGGCCGTTATGATGATGAGAGCCGCAGTCACAGTCGCTCCTTGAGTGCATCTCCTGCTCGCCACGGCCTCAGCCCTAGAAGTTCCTCCCCACAAAAAACCTCTCCTCCTAGAGAAGTTTCTCCTGATAAGCGTAGCAATGAGAGGTCTCCATCTCCTCGTCGCAGCCTCAGCCCAAGAAGCCCATCTTTGCAAAAGGCCTCTCCATCTAAGGAGGTGTCTCCTGAAAGGCGTAGCAATGAGAGGTCCCCGTCTCCTGGTAGCCCTTCTCCCCTGGGCAAAGTTGATGCTGCTTCTCGAAGTCAATCTCCTTATGCTGCGGAATGA
Protein Sequence
- >fgenesh2_kg.8__2435__AT5G64200.1
MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSRRSRSRSPRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSYERRERHQEKDRDHRRRTRSRSASPDDKRRVRGRYDDESRSHSRSLSASPARHGLSPRSSSPQKTSPPREVSPDKRSNERSPSPRRSLSPRSPSLQKASPSKEVSPERRSNERSPSPGSPSPLGKVDAASRSQSPYAAE