Information report for fgenesh2_kg.8__1964__AT5G60100.1
Gene Details
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Functional Annotation
- Encodes pseudo-response regulator 3 (APRR3/PRR3). PRR3 transcript levels vary in a circadian pattern with peak expression at dusk under long and short day conditions. PRR3 affects the period of the circadian clock and seedlings with reduced levels of PRR3 have shorter periods, based on transcriptional assays of clock-regulated genes. PRR3 is expressed in the vasculature of cotyledons and leaves where it may help stabilize the TOC1 protein by preventing interactions between TOC1 and the F-box protein ZTL.
Homologous
- Actinidia chinensis: CEY00_Acc32265, CEY00_Acc30201
- Brassica napus: BnaC09G0435100ZS, BnaA10G0154500ZS
- Brassica oleracea: Bo9g141080
- Brassica rapa: Bra002512
- Juglans regia: Jr05_09250, Jr05_09260, Jr07_35490, Jr07_35480, Jr07_35500
- Nicotiana attenuata: A4A49_22842
- Vitis vinifera: VIT_06s0004g03650
Gene Resources
- Pfam: PF06203 PF00072
- UniProt: D7MT61
- RefSeq: XP_002866368.1
- EMBL: GL348720
- AlphaFoldDB: D7MT61
- InterPro: IPR001789 , IPR010402 , IPR011006 , IPR045279
- PANTHER: PTHR43874 , PTHR43874:SF117
- SUPFAM: SSF52172
- PROSITE: PS50110 , PS51017
- Gene3D: 3.40.50.2300
- CDD: cd17582
- eggNOG: KOG1601
- STRING: 81972.D7MT61
- HOGENOM: CLU_041215_0_0_1
Sequences
gDNA Sequence
- >fgenesh2_kg.8__1964__AT5G60100.1
AAAAAAAAAATGCCACTTTGTGAAAGTTTCTTCTGGTTCTTCAGATATTAGAAATGGATCTCTCTTCTATACCAATTTTGTTGTTCAACTGTCGTCACTTCCTGATTTATAATCATGCAAAGGACTCCATGTGAGTACATTACTATATAAGGATACTTTTTGAAACATCTATAGGGAGAAATCTTGCAAAGGATTTGAACTTACTTGCGAATGAATTGACCTTTGACGCGAGGCCGTTGCTCAGCTAGTTTCTTCCTGCTATGGTACCTAACCTAAAGCATACAAAAAAGGCGATAATTTTCGTCTAGGAAACGAGAGCTTAAGCTTGTTTAGAGCTTACCTTCTTCTCAAAACATCGCTCTTTACGTTTAAGGCGAAACTTCATCAAAGCAGCTTCTCTTTGTGCCGATCGGTCACTTCCACTAGACTGCTGATTTAAAGGATTGTCACTGCTCGAACCCGAACCCAACAGTTTCCCAACAGGACTGCCATGAGGAGAACAACTTCCCATGTTTTCTTCTGGAGCCTAACTCACCAAAAATTAAAGCTTTATGATGAAACCGGCATAGATTTCAAAGACAGCGTCAAGCATCGTAAAAATTACCTTATTAGCAGAAGTAGCATCATTATTGTATCTGCACATGAGTATATGACACAAGAAACAATAACTCCAAATCAGTCACAGGTTCCACAGTTCTTTAGCAGTTAAGGTCAAGAACTTACTTTGAGAACGGAGAGTGATTTGAATGCCTCAAAACACTTTGATCACCGATTCTGTAATCTCCAGCCTCTCTTGGTTTTTTCAGAGTTTGCTCGAGTGATTGCAAAACTTCTCGGTTAGATGAAGATGTTTTGCTTTCTACTTGTGAGTTACCAGAAGAGCGATTCAGCATGTCATCATTGTTTCTCTCCAAAGCTTGAACAGAATACTTTGCATCCTTTTCCAGATCTCCGTGTTCTTCAGCTTTCTTACTCATAGACATTCCTGTCTGTGATCCCGTGCCTATTACAATATCATCTAAAGTAAAACAGATAGAATCTCAAGGAATTGTTCCACAAGATCAGTGTACTCACATTTTAAGTGACTAATTAAATTGTGTTCTTACCTATTTGTTCTTTCTGATCTTCAACCTCCTTCGGTTTATTAACATGTACCGATCCATTTTCATAGGTTTCTTTCTTATTGGGTGCATCGGGCAATTGATTTGAAGGCGAGGTGCTCTTAGTATCACTGGCTCTTTTGGTCCAAGAACTCTACATATTTTTATAAATGCAAAACCAATAAAAAATTTATAAACAGATTATTCCGACATTGTTATTATCTATAGCCACAGAAACATATTACCTGAGTTCCACTCCCATTATCACTTCCACCATCTCGGTTACTCAAACCACCACTACTCCCATCTTCCGTCTCGAGTTCATCACTGATGCTGGCATCATTTTCTGACCCTTCAGTGCTTTCAGGTTTCACCGACTTCTTGTCCTGTATTCCACTCTCACTTCCGCTTCCGCTAGACTGGTAAATCAAGAAACGCATAAGTAAAAGAAAAAAACACAGAGTAACTTTTGTAAAACAGGTAACCAAATCAGAACTCATACGCTGTGACATTTTCTCCAGACATGTTGCCAAAGATTCTTTAGTTCGTTCTTTCTAATGGGCTTCACGAGAAAATCAACAGCACCATTCGACAAACACTTAAAGACCAGAACCATAGAATCATGAGATGACATCACTACAAAAAGAAAACATCAGATCTTGAGTTACACAAACTGAGCATCGCATAATGAAACTAGATAAACAATTATTTAATGAGGATTTAAGTAAATACTTATGACGGGGATGTTCTTAAGTGTCTTATGGCTCATAATCTTGGACAACAGACCGGTTCCAGAATGGACAGGCAGGACAACCTCTGTTAAGACAAGATCAATGCAACTCTTCTCATCTTCTAGAATTCTCCAGGCTTCAAGGACATCCGAAACAGCATTAACTGACAAAAAGTTTCCAAATTCACAACTTAGTCAAAAGCAACAATGTGATTGCTAAACAAGGATGATCAATTCAATAAAAAAAAAACCTTCATAGCTGCAATTCTTCAAAAGGGCAGTAACAATATGGCGTGTTGAGTCATCATTCTCCACCAGAAGAACCTTAAGCGATCTAACCGGGAGATACCTCTCCCACTTAACAACAGGAGCTAGCGGTTGCTGTTGTTGTTGAGAAATCTGTATCAAATTGTTGGCATCATCTCCAGGAGTATCTTCAACTCGAAATTCATCTTCTTCGGATGAAACAAACACTTGCCTCTCGGTTTTCACTTCATCACCAGTTTCGTTGTTATTAAAACACATTTTTAGAAATCTAAAGAAAATGTCAAGACCAGCCTCCATGAACAAGATAGAATAGAAGCAGCATCAAATAACAGCTAAGATTCTGCAGAAACGTCCCCTCTACACTGACATAACACTTGCACATTTCTTCTTTCCCCAAACTTATTTTAATCCCTTCACCAAAACCTCAACCCAATAAGAAAAGAGAAACAAAAATAGCAACATTCCGTAAGAACATCACAGTCTCACACCAGAACAAAACAAAAACTGAATTTGGATAAATCCTCAAACTTTGCCCAAAGAAAAACTAAACAAGCCAAATCAAAGTTCAATAGTAGAGCACACTCAGCTTTAGGAAACAATCTGAATCTTGTTGTTTCTGAAATCAAAAGCTAGAATGTACCAATAGAAAATCATCACAGTACTTGGCAACGAGTTAAGAAAGTTTGAACACAGTCTCTTTTATTCCTTAGATCTAAGATCACAGTACTTGGCAACTTTCTCAAAGTTGTTATAAATTCCTCAGAACCCAGATACAAAATCAAACTCCAAGCTATGATACTTAATGAAATAAGCACAAAAACTGAAACAGCAGCAGATTGTCAAAGCGACAAAACAAACAAAAGCAAACCTTTGTAGCTTAATCCATAGATGAAGAACACCACCACCACCAGAATCTCTTACCATACCTGACTTTCAAAAAAACAAATTACAACGAAAAAAAGAACAGATGTTTTGCTTAGCAATTTAATCACCTACACTAAATGAAAGGTATCATCCAAAAATGTTTTGATTCGTATCTAACTTTTTCTCTTACCAACAACTTTACAGAATCCAATTGCTACTAAAATATGTAAAAAGAAAGAAATTTTAAA
CDS Sequence
- >fgenesh2_kg.8__1964__AT5G60100.1
ATGTGTTTTAATAACAACGAAACTGGTGATGAAGTGAAAACCGAGAGGCAAGTGTTTGTTTCATCCGAAGAAGATGAATTTCGAGTTGAAGATACTCCTGGAGATGATGCCAACAATTTGATACAGATTTCTCAACAACAACAGCAACCGCTAGCTCCTGTTGTTAAGTGGGAGAGGTATCTCCCGGTTAGATCGCTTAAGGTTCTTCTGGTGGAGAATGATGACTCAACACGCCATATTGTTACTGCCCTTTTGAAGAATTGCAGCTATGAAGTTAATGCTGTTTCGGATGTCCTTGAAGCCTGGAGAATTCTAGAAGATGAGAAGAGTTGCATTGATCTTGTCTTAACAGAGGTTGTCCTGCCTGTCCATTCTGGAACCGGTCTGTTGTCCAAGATTATGAGCCATAAGACACTTAAGAACATCCCCGTCATAATGATGTCATCTCATGATTCTATGGTTCTGGTCTTTAAGTGTTTGTCGAATGGTGCTGTTGATTTTCTCGTGAAGCCCATTAGAAAGAACGAACTAAAGAATCTTTGGCAACATGTCTGGAGAAAATGTCACAGCTCTAGCGGAAGCGGAAGTGAGAGTGGAATACAGGACAAGAAGTCGGTGAAACCTGAAAGCACTGAAGGGTCAGAAAATGATGCCAGCATCAGTGATGAACTCGAGACGGAAGATGGGAGTAGTGGTGGTTTGAGTAACCGAGATGGTGGAAGTGATAATGGGAGTGGAACTCAGAGTTCTTGGACCAAAAGAGCCAGTGATACTAAGAGCACCTCGCCTTCAAATCAATTGCCCGATGCACCCAATAAGAAAGAAACCTATGAAAATGGATCGGTACATGTTAATAAACCGAAGGAGGTTGAAGATCAGAAAGAACAAATAGGCACGGGATCACAGACAGGAATGTCTATGAGTAAGAAAGCTGAAGAACACGGAGATCTGGAAAAGGATGCAAAGTATTCTGTTCAAGCTTTGGAGAGAAACAATGATGACATGCTGAATCGCTCTTCTGGTAACTCACAAGTAGAAAGCAAAACATCTTCATCTAACCGAGAAGTTTTGCAATCACTCGAGCAAACTCTGAAAAAACCAAGAGAGGCTGGAGATTACAGAATCGGTGATCAAAGTGTTTTGAGGCATTCAAATCACTCTCCGTTCTCAAAATACAATAATGATGCTACTTCTGCTAATAAGGCTCCAGAAGAAAACATGGGAAGTTGTTCTCCTCATGGCAGTCCTGTTGGGAAACTGTTGGGTTCGGGTTCGAGCAGTGACAATCCTTTAAATCAGCAGTCTAGTGGAAGTGACCGATCGGCACAAAGAGAAGCTGCTTTGATGAAGTTTCGCCTTAAACGTAAAGAGCGATGTTTTGAGAAGAAGGTTAGGTACCATAGCAGGAAGAAACTAGCTGAGCAACGGCCTCGCGTCAAAGGTCAATTCATTCGCAATCCTTTGCATGATTATAAATCAGGAAGTGACGACAGTTGA
Protein Sequence
- >fgenesh2_kg.8__1964__AT5G60100.1
MCFNNNETGDEVKTERQVFVSSEEDEFRVEDTPGDDANNLIQISQQQQQPLAPVVKWERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVNAVSDVLEAWRILEDEKSCIDLVLTEVVLPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVWRKCHSSSGSGSESGIQDKKSVKPESTEGSENDASISDELETEDGSSGGLSNRDGGSDNGSGTQSSWTKRASDTKSTSPSNQLPDAPNKKETYENGSVHVNKPKEVEDQKEQIGTGSQTGMSMSKKAEEHGDLEKDAKYSVQALERNNDDMLNRSSGNSQVESKTSSSNREVLQSLEQTLKKPREAGDYRIGDQSVLRHSNHSPFSKYNNDATSANKAPEENMGSCSPHGSPVGKLLGSGSSSDNPLNQQSSGSDRSAQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPRVKGQFIRNPLHDYKSGSDDS