Information report for fgenesh2_kg.8__1230__AT5G53420.1
Gene Details
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Functional Annotation
- Member of ASML2 family of CCT domain proteins.There is a preferential accumulation of RNA isoforms CCT101.1 and CCT101.2 in response to N-treatment, each isoform has different targets.
Homologous
- Brassica napus: BnaA10G0098900ZS, BnaC09G0356000ZS, BnaC03G0151100ZS, BnaA03G0130000ZS, BnaC02G0176800ZS, BnaA02G0139100ZS, BnaA08G0165700ZS
- Brassica oleracea: Bo9g111240, Bo3g022670, Bo2g045820, Bo8g052930
- Brassica rapa: Bra003057, Bra029069, Bra022655, Bra010391
- Gossypium hirsutum: Gohir.D08G104200
- Manihot esculenta: MANES_06G159900
Gene Resources
- Pfam: PF06203
- UniProt: D7MSY2
- RefSeq: XP_002864241.1
- EMBL: GL348720
- AlphaFoldDB: D7MSY2
- InterPro: IPR010402 , IPR045281
- PANTHER: PTHR31319 , PTHR31319:SF71
- PROSITE: PS51017
- eggNOG: ENOG502QRVZ
- STRING: 81972.D7MSY2
- HOGENOM: CLU_073213_0_0_1
Sequences
gDNA Sequence
- >fgenesh2_kg.8__1230__AT5G53420.1
AGGCAAGAGGAGAGCTAAGTACCAAACTTTTTCCCTCAGGGTTTTCCTCTCAAATTCACAACTTGGCCTCTGTTTTTCTTTTTGGCTTTCTTTATGTTCTCTTCTTCTCTAAAAACTCGTTTCCTACTTCCAAGAATTTCTCTCAGAAAGACCAAGAACTCAAAATGTATCAAGATTCTGGATTAATGCTCCGTTACATGCAAAACTGTTCCCCAGATATTCAACAATTCGAAGACCTCTTCAAATCATACAAACTCTCCGATGAAATGGTCTGATTTTGCTTTCAATTCTGTTTTTTTTTTCTATTCACTGCATTTGATTACAGATCTTTCTTCTTCTTCTTTACTTTAGATAGGTTTTTTTTTTTACTTACTTTAAAACTCACTTTCTAGTTTTTGGTTAAAGATTCTGATAGTTTTTTTGTTTCTTTTTTCCTTGTGAAGTAATTTGTCTACTAGTGAAGTAAATTTTCCTAAAAGTTTTGTGGTGCTAAGTGTTAAGTGGCTTATTTGTTTTTCTGGTGTAAATTTTGTAGCCACTTGATGAGATATTTTGGTTTCGCTGACCTTACCAAAATGTGTTTTTGGCTGCTGAGAAAGTTGAGTAAGAAAAAATTAGGTTTGTTTAAAAGGAATAAAAATGGAATCTTTTTTTACTGCTGCAAAAAAGCCAGATTTTTCTTTTCCATTGAAAAAAGGGAGTTTTCTAGGGAAACTAAAGAAAGTCTCTTTTTTTGTTTGTGGGTTTTGATTTTTGATAATGGGAATTACTCTTTATTTCACATGAGATTCCATGAATTCTGTAACATGAGGTTCCGTGCTCTTCAAGACTTGTTTTGTTCTGATTTAAATTACTTCTTAAAACTAGAGAATTGGTTTTGTGTTGTTTTAATTGGCTCTTTCTTCTCAAAATCAATCCTCCACTGAAGAAAGAAAAAAGATTCTTTTTTCTCTTACCCTTTTTTGAACGAATCCACTCAACAAAAAAGATTTGTGTTTCACTGTCTGAATGTCTCGAACTATGTTCTGTCTTGTGTGGTCTTATTGATTCGATGTTACTTTTGATTGTCCTTTTTTGCAGAACAACACTTTTGTTGAGTCATCAAACATATCTGAGTATCATATTGGAGAAGAAGGTGATCTTTTTAAAGCTCCTGATCCAATTCTTGAAGAACAAATCTTACCTGTTGATCCACTCTCTGCTGCTTTGACTATGATCTCTTGTGGTGAAGACACTTCGCAAGGTCTTTGTGAGCTTCCTGATCTTGGTTCATTGCAGAGTGGTCAACAGCTTCTTGACAAAGCTTTTTATGAGTGTGAGCAAGATCTTATGATGAAATCAGCTATGGAGTCTCCATTCTCTGATGTTTTAGACATCAAGAACATCTCTGTTGTGACGACAATCAATGAGAACCAAGATATGCAGAAGAGCGTTAGCTCGGGGAATTTGAGCTCTATGGATTGGTCACATGCACAGCAAGAGACTGTAATGATTCAGAATTTCCCTGATTTCGATTTTGGTTATGGGATGCGAAGAGCCTTTAGTGAAGGCGACATACAGGTTTGACATTAAAAAACATAAAACATTGATCTGAAATGAAAGTTTTGCGCGATTCTGTATCATCTAGAATTTGAGTAAGTTGTATCCTTTTTAGACTCTTGAGATGAATATAAATTGTGGATTTGAGTATCTCTTTTTTTTGTTTTTGGATAGCAGAAACTAAGGACAGGTCTTGTCCATCTTCATGGATAGGATTATTGTGAGCTGTACTTCAGAGGATCGCCGTGAGAAGCTTTCTCGATACAAGAACAAGAAGAGCAGACGAAATTTCGGGCGTAAAATTAAGGTATACAAACAAAACACTTGAAGTCATTTTAGCTCAAAAACAAGCACTTGAAGATCATCTAAATGTTGTTTGGTTTGGTTTCAGTATGCTTGCAGGAAAGCTCTTGCAGATAGCCAACCTAGAGTCCGAGGAAGGTTTGCGAAAACAGAGGAGAGGAAATAGAATGGTTCAAAAAAAGAGCTCAAAAGGAGGAGACTAAGCAAAAGGAAGAAACTAGAAGAAGAATAAGGATATAAAGCCCCATCTCATTGGAAACTAGTTTTGTTTTATAATCTATGTATAAAACTTTAAAATCTTATAAGCATCCAATTAGTTTTTGTATATAAAGGGTTTCTCTAAATAAGCTTTTAAGAAAAGAAATTGTAGCTAAAAAATGTTTGTATTATTGTAGT
CDS Sequence
- >fgenesh2_kg.8__1230__AT5G53420.1
ATGTATCAAGATTCTGGATTAATGCTCCGTTACATGCAAAACTGTTCCCCAGATATTCAACAATTCGAAGACCTCTTCAAATCATACAAACTCTCCGATGAAATGAACAACACTTTTGTTGAGTCATCAAACATATCTGAGTATCATATTGGAGAAGAAGGTGATCTTTTTAAAGCTCCTGATCCAATTCTTGAAGAACAAATCTTACCTGTTGATCCACTCTCTGCTGCTTTGACTATGATCTCTTGTGGTGAAGACACTTCGCAAGGTCTTTGTGAGCTTCCTGATCTTGGTTCATTGCAGAGTGGTCAACAGCTTCTTGACAAAGCTTTTTATGAGTGTGAGCAAGATCTTATGATGAAATCAGCTATGGAGTCTCCATTCTCTGATGTTTTAGACATCAAGAACATCTCTGTTGTGACGACAATCAATGAGAACCAAGATATGCAGAAGAGCGTTAGCTCGGGGAATTTGAGCTCTATGGATTGGTCACATGCACAGCAAGAGACTGTAATGATTCAGAATTTCCCTGATTTCGATTTTGGTTATGGGATGCGAAGAGCCTTTAGTGAAGGCGACATACAGGTCTTGTCCATCTTCATGGATAGGATTATTGTGAGCTGTACTTCAGAGGATCGCCGTGAGAAGCTTTCTCGATACAAGAACAAGAAGAGCAGACGAAATTTCGGGCGTAAAATTAAGTATGCTTGCAGGAAAGCTCTTGCAGATAGCCAACCTAGAGTCCGAGGAAGGTTTGCGAAAACAGAGGAGAGGAAATAG
Protein Sequence
- >fgenesh2_kg.8__1230__AT5G53420.1
MYQDSGLMLRYMQNCSPDIQQFEDLFKSYKLSDEMNNTFVESSNISEYHIGEEGDLFKAPDPILEEQILPVDPLSAALTMISCGEDTSQGLCELPDLGSLQSGQQLLDKAFYECEQDLMMKSAMESPFSDVLDIKNISVVTTINENQDMQKSVSSGNLSSMDWSHAQQETVMIQNFPDFDFGYGMRRAFSEGDIQVLSIFMDRIIVSCTSEDRREKLSRYKNKKSRRNFGRKIKYACRKALADSQPRVRGRFAKTEERK