Information report for fgenesh2_kg.7__1822__AT4G24540.1
Gene Details
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Functional Annotation
- Encodes a MADS-box protein involved in flowering. Regulates the expression of SOC1 and is also upregulated by SOC1. Binds with IMK3 kinase domain. Phosphorylated by IMK3; likely to be a target for IMK3 kinase domain.
Homologous
- Arabidopsis thaliana: AT4G24540.1
- Brassica napus: GSBRNA2T00116099001, BnaC01G0180300ZS
- Brassica oleracea: XP_013583417.1, Bo1g039080, XP_013583411.1
- Brassica rapa: XP_009137455.1, XP_009138207.1, XP_009138200.1, XP_009138194.1, XP_009137454.1, XP_009137453.1, XP_009138187.1, XP_009138179.1
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: D7M8T2
- RefSeq: XP_002867660.1
- EMBL: GL348719
- AlphaFoldDB: D7M8T2
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS00350 , PS50066 , PS51297
- Gene3D: 3.40.1810.10
- CDD: cd00265
- eggNOG: KOG0014
- STRING: 81972.D7M8T2
- HOGENOM: CLU_053053_14_1_1
Sequences
gDNA Sequence
- >fgenesh2_kg.7__1822__AT4G24540.1
CTCTCTCTTTCTCTCTCACTCACACATTAGGGAATCAAAAGCTACCAGAAAAACCTTTTTTTATCTTCTCACGAATTTAATAAAGTAGGTGCTGAGATTGCAAAACCTAATCCAAGATATTCAAAGAAAGGTAATTAAAAGCTGTGAATCTGTGTTCTTTCTTCTTAAGCAAAGTGTTTGATGGATTCATCTAGTCCTGTTCCTTCTTTTGCTTCTCATGGTTTCTGGATCTGATCTCTCTTTCTCCCTCTCTCTCTCTACCCATCTAGGGTTTCTTGAGAATATCATCTAAACCCTCTTTTGCTAACCAATGTTCCACTTGGTTTCTTTCTCTGTTCTTTCTCTAAATGGTGTTATGGGTAGGCAAGATTCAAGAACAGTAGTGAAAGAGATCTGGTAAAATGGCGAGAGAGAAGATAAGGATAAAGAAGATTGATAACATAACAGCGAGACAAGTTACTTTCTCTAAGAGAAGAAGAGGAATCTTTAAGAAAGCCGATGAACTTTCAGTTCTTTGCGATGCTGATGTTGCTCTCATCATCTTCTCTGCCACTGGAAAGCTCTTCGAATTCTCTAGCTCAAGGTATTCTCTAGAATATGGTTTGAGAAATATATTAAGATATATGTATTTAAATGAGATTTCTTTTTTTCTTGTTTACTTTCAATAGTTAATTATCATTAGGCTCGGAGATCTCATGTACGAAATCGACTCAGTTTTTCTGCATAATGTGAGACCTAAATTATTATACTTGCTCTCATTCCTTTGTGTACCTAATTAAATACTAGGGTTTATGTTTCTATTTATCACTTTTATGTTCTAACAAATAATGTAATTAATTGCGTTTAACTTTTCTGAAACATAATTATGGGTTATTAACTTTGAATTTTTCAATGATTTTCATTTAGACTCATGGTTATTAATTTTGGAAGCATATGTATATATGGATACATAGTACTTACCACAATTAGAATGAATTTCTTTTCCCTTTTTTTCCATTTGACTTTTATGTATTACAAATGTCTTTGACACTGTCACTGGTATGATTGGGGATTAAGTCTTAACCAGTCGTTTAGTTTATCTTGGGAAGCTTTACCATAATTGGGAACAGAGTTATCTAATAAATATTGTCTGCATCATGATGGGTACTTCTGATTATTTTTTCTTTTATTATAACTGAAAAAGGCTTTTACTAGTATATTTGCAAATGTAAATATGGACGAAGGAAAGGTTCATATGAAAGATGGATTGTTTGTTGAAACGTGTAGAATGAGAGACATATTGGGAAGGTATAGTCTTCATGCAAGTAACATCAACAGATTGATGGATCCACCTTCTACTCATCTCCAGGTATTCTCAAAATCACTCACTCACTCTTCTTTTTTTTTTTTTTTTTTTTTTTGAATAGAATGTAAAATTTATTCAAAAAATACTTATGTACAATGAATGCAGCTTGTTTAAAGAATTTCTTTGACTATTTTTAAAAGATAGAGAGGTTTAAAAAGAATAGACGATTATCTCGTGGCTAACAATCTCACTCTTCTCTATTGACCAAACCCTTCTCTTTTTATCAAACCCGTTTCTCTATAATATTTTCCAATATTTACTTGTTGTTACACTTTTGTGTTGTATTTGTTTAGGTGTACGTCTAAATATAGAAACATAATGTGGCATAGAATCATTAATCTTTAAGCATTTTGAAAATGTTGACTTTGCATCTAGCAGCTTGAGAATTGTAACCTCTCCAGACTAAGTAAGGAAGTCGAAGACAAAACCAAGCAGCTACGGTATGGCTCCATTTATGTGTATTTGTTATATAGCTGTAAGAGATATACTATTTCATGTTTGTGGTTTTTATGTTTTGACAATGATGTGTGAATGTTTTTTTTTTTTATCACCAAATGATGTGTGAGTGTTTTTTATATAGGTTTTAGAAACTATATCATGGAAAAAGGTCGTTTCATCATGTGTAGGTTCGTCGTGTTCTGGTGTTTCTTGGAAATTGATGTTTTGTTTGTAGATTTTAATTAAGAGCTACTTCTAAAGTTTACAAGAGTTTTGTAGTTTTCAAATATGGTCATTATTCTCATTTTTATTTAATTATCAACATTATTTAGCATAGGTAGATAATATTTTTGTTTGGTAATTATTTCTCAAAGCTGGGTCCAAAACAACTCTGTAAGATATTTTGGTAGAAATGAGTGTACGTATTTGATGTGGTTTCAAGTATTCTCATAAATTTGAAGTGATTATTATGTTGTATTAATTCAACGTAAAACAGGAAACTGAGAGGAGAGGATCTTGATGGATTGAACTTAGAAGAATTGCAGCGGCTAGAGAAACTGCTTGAATCCGGACTTAGCCGTGTTTCTGAAAAGAAGGTTTACTACTATACAAAAACTTATTAATATCATGCATATTTCCATAACGTGGCATGTAATATATAAAAGTTTGACTCTAGTTGCTTTTGGTAATTATTAATAGGGCGAGTGTGTGATGAGCCAGATTTCTTCACTTGAGAAACGGGTTAGTACATACAATTCGAATAACTAATGGAAATGATAAGCCTATCTATAGCTAGTGACTCTTTCTTAATAAGTGAAACAGGGATCGGAATTGGTGGATGAAAATAAGAGACTGAGGGATAAAGTATGGCTCTAAACCCTTATAGAAATCATGTAATTAATAACCTTAATCTGTTTTTTTTTTTTCTCCTATATATAATAAAATAAGATGAGGGAACGTATATTATATATCGGCAGCTAGAAACGTTGGAAAGGGCTAAACTGATTACGTTTATGGAGGCTTTGGAGACAGAGTCGGTGACCACAAATGTGTCAAGCTACGACAGTGGAGCTCCCCTTGAGGATGACTCCGACACTTCCCTGAAGCTTGGGTATAATTTATTTAACTGAACATATATTTCAAACTTTTTATTGACCATTTTGTATGTGGATGTTACTAATTTTTTTTTGGTTAGGCTTCCATCTTGGGAATGAACCTGAGAGAGAGAAAGATCCAGCAGAGTTGACTTCGATGGAAGCCCACAAACTATTAAGTCTAGTCTACCTTTTCCCTTTCTTTCCTTTGAAATAAGTATTGAAAAAAAATTGGGATGGGAAGAATGAATTCTCATTGCATTGCAGAGAAGCAAGTTTCAGACATTGTACGTGTTATTGGTTTTTATAACTGTTTTGCAC
CDS Sequence
- >fgenesh2_kg.7__1822__AT4G24540.1
ATGGCGAGAGAGAAGATAAGGATAAAGAAGATTGATAACATAACAGCGAGACAAGTTACTTTCTCTAAGAGAAGAAGAGGAATCTTTAAGAAAGCCGATGAACTTTCAGTTCTTTGCGATGCTGATGTTGCTCTCATCATCTTCTCTGCCACTGGAAAGCTCTTCGAATTCTCTAGCTCAAGAATGAGAGACATATTGGGAAGGTATAGTCTTCATGCAAGTAACATCAACAGATTGATGGATCCACCTTCTACTCATCTCCAGCTTGAGAATTGTAACCTCTCCAGACTAAGTAAGGAAGTCGAAGACAAAACCAAGCAGCTACGGAAACTGAGAGGAGAGGATCTTGATGGATTGAACTTAGAAGAATTGCAGCGGCTAGAGAAACTGCTTGAATCCGGACTTAGCCGTGTTTCTGAAAAGAAGGGCGAGTGTGTGATGAGCCAGATTTCTTCACTTGAGAAACGGGGATCGGAATTGGTGGATGAAAATAAGAGACTGAGGGATAAACTAGAAACGTTGGAAAGGGCTAAACTGATTACGTTTATGGAGGCTTTGGAGACAGAGTCGGTGACCACAAATGTGTCAAGCTACGACAGTGGAGCTCCCCTTGAGGATGACTCCGACACTTCCCTGAAGCTTGGGCTTCCATCTTGGGAATGA
Protein Sequence
- >fgenesh2_kg.7__1822__AT4G24540.1
MAREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSSRMRDILGRYSLHASNINRLMDPPSTHLQLENCNLSRLSKEVEDKTKQLRKLRGEDLDGLNLEELQRLEKLLESGLSRVSEKKGECVMSQISSLEKRGSELVDENKRLRDKLETLERAKLITFMEALETESVTTNVSSYDSGAPLEDDSDTSLKLGLPSWE