Information report for fgenesh2_kg.7__1163__AT4G30200.2
Gene Details
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Functional Annotation
- Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.
Homologous
- Brassica napus: BnaA01G0071400ZS, BnaA08G0156000ZS, BnaC01G0084500ZS, BnaC03G0774400ZS, BnaA03G0516300ZS, BnaC07G0495000ZS
- Brassica oleracea: Bo1g014420, Bo3g175710, Bo7g114310
- Brassica rapa: Bra011173, Bra024097, Bra010297
- Gossypium hirsutum: Gohir.D08G030100, Gohir.A08G019500
- Prunus avium: Pav_sc0000359.1_g500.1.mk
- Prunus persica: PRUPE_1G084700
Gene Resources
- Pfam: PF07227
- UniProt: D7MC72
- RefSeq: XP_002867362.1
- EMBL: GL348719
- AlphaFoldDB: D7MC72
- InterPro: IPR003961 , IPR013783 , IPR032881 , IPR036116 , IPR044514
- PANTHER: PTHR46286 , PTHR46286:SF2
- SUPFAM: SSF49265
- PROSITE: PS50853
- Gene3D: 2.60.40.10
- OrthoDB: D7MC72
- CDD: cd00063 , cd15521
- eggNOG: ENOG502QR8D
- STRING: 81972.D7MC72
- HOGENOM: CLU_016873_0_0_1
Sequences
gDNA Sequence
- >fgenesh2_kg.7__1163__AT4G30200.2
CTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCCATCTCACAGCGTCAATCTCTCTCTCTCTTCTCCGCTCACAACGACTCTCTCTCTCTTCTCCGGTGTATCCGTTCTCCGGGAACTTCTCCGAAGAGGGAGAGAGAAAAAAAACCGTTCGATTCAATCTCTTGACGAATTTTTCTTAAGCTTTCCTTATTGGGTAACTTTCTTTCCTTTAATACTTTTTTCCCGATCTCTCTCTCCTCTGTTTTTATTTCACTCCCATAAAGTTTTTATTTTTTTCAATCGTTTACCTAATTTTTTTATTTTCTTCACATCGCAGGATTTGAAGATTCTGAGTGGTTGTTATGATGATAATGTGGGTTTGATTAGTTCTTGACAGTTTCTCTACGCTCATGGATTCTTCTCTCGATGGTAGATTTCTGGGTTTCATTGGTTGCTTAAGATTTATCGATATCCGTGTCTCTTTGTTTTTCCCTATAATAATGTTTCAAGAAAAAAAAAACATATTTTTTTACTTCTTTTTGTTTTTAGCTGGTGATGAATGAAGAAGCTTTGGATTCTCAAATTTGTGTTTATTTTATTCAAATTTTTTTCGAAAGTTGGAGACTTTATGTTTTATACTAATTTGCTACTGATTTTAGATTACTGGGTTCTTTAATCTTTCTATTTCTATTGGAAGTTTTATGTTTTCTAATTGGTGATTCTAAATGGTGGGTCTTTACTTTTTTTTGGTTGATTGGTTCTAACTCCATATTCTTGTGTGTTTGTGTGTGTTTTTTTCCACTATCATTGGTTTGATGAATTGGGTTTTTAATTTAATCGTGCGTCAGAAGACTATATGACTTTTGTTATGTGTATAGAATAAGATTCCATGATGGCATGATTGATGAATGTGGGTTCTATTACCTAAAAGAATCATGCTTTCATTCTCTAACTTGTGGCTTATTCTTTGCTTTGGATCTTGGTCTATTGCATCCTATAGAACATTATCTTTGCTGTCTTATTGTTTGGTTCTCTCTGACTCCTTGATGTCTATTGATCAAACCTTATCAGCATTGTTGTCCTGTGGTGGTAGTTGAACTATCTTTGTTTTTAAATGAACAAAGTGTTTCACTTTTCAGAATTCCAATTTAGTTTTGTATTTGAATTTGTATACATTCTTCTTAGTTTTGGAAAACAAGGTTCTAAGGCAGATTCCTGTATTAGTCTTGGATAGTTTGTGTGTTTCTGGTTAAGACATTGTTCTCCATTGCCTTCACTTCGAGCCAAAAATGTAATTTGACTTCCTTTTCTTTCTATATACAGGAGCTGCAGGTGACTCATCGAAATGCAATGAAATGAGTGTTGATGAGAAGAGACAGCTTGTTTATGAACTGTCGAAGCAATCACATCTAGCTTCTGAGGTCTTGCAGGCATGGAGCCGGCAAGAGATTCTACAGATCTTATGCGCAGAAATGGGAAAAGAAAGGAAGTATACTGGCTTGACCAAAGTCAAGATCATCGAGACCCTTTTGAAAATTGTATCCGAGAAAAACCCTGGAGAGAATGAAGGAAAGAAGAGAGATTCTGATTGTTTGCCTATTCAGAGAAACACAAAGAGACAAAGGAAGGTCGATAATCCTTCTAGGTATGTGCTTCCAGCAAGCAACAACGTAACAAGCAACAATGCCTCAGGGAGCTGCAGCTCGGTTAATACTAAAGGTAAAAAAATCTTCTGTTTTGGGTTCAATGTTATCAACTTTTTGGTGCATTCTAATCCGAAAATAGAATTTGGTCAGGTGAGAGTACTATCTACTGCAAGAATTTGGCTTGCCGTGCTGTACTGAGACAGGAAGACTCATTTTGCAGAAGGTGTTCCTGTTGCATCTGTCGTAAGTATGATGATAACAAAGATCCTAGTCTCTGGTTAACATGTAGCTCAGATCCTCCATTTGAGGGTGAGTCTTGCGGATTCTCGTGTCATCTTGAATGTGCTTTCAAGACTGAAAAATCCGGTCTTGGAAAAGACAAGCAAAGTGAGGGATGCTGCTTCTATTGTGTCTCTTGCGGTAAAGCAAACAGTTTGCTTGAATGTTGGAAGAAGCAATTGACGATTGCTAAAGAAACCAGAAGGGTAGATGTGCTTTGTTACCGTCTTTTCTTAGTACAGAAACTATTGAAGAGCTCAACAAAATACCGAAATCTGTGTATGGTTGTGGATGAAGCTGTCAAGAGTCTTGAAGCTGATGTAGGTCCTCTCACTGGTCTCCCTATGAAAATGGGTAGAGGAATTGTAAACAGACTTCATTCGGGACCCGATGTGCAGAAACTTTGCTCTTCTGCTCTTGAATCTCTTGAAACTCTAGCAACTAAACCTCCGGATGTTGCTGCATTACCTTCATCTCGCAGCTCCAAGATGCAGCAAGGTCAGAATTTTTATATCTTCAACGATTGAGTAATATAACAAGTATGTTAAATAACGTTGATTCTCTGATTTTGTTTCGTAGATTGTTCTTATGTATTGAGTAATGAGATATCTGCAGATACAGCAACCACAGGATCAACCAAGATCAGGTTCGAGGATGTTAACGCGACTTCACTTACAGTGGTTCTCGCCTCTAATGAAATTCCCTCACCTCCAAACATCGTCCACTACAGTATTTGGCATCGCAAGGTACCAGAAAAAGATTACCCGGAGAAATCGACTTGCACATTGTTTACTCCAAACACAAGATTTGTTGTCTCTGGATTAGCTCCAGCTTCCGAGTATTGCTTCAAAGTTGTGTCCTATAGTGGAACCAGAGAAATGGGCGTCGATGAAATCAATGTTTTGACACGTAGCGCTGAAGAAGGAGCGAATTGCTCTTCGGGAGTCGAAAGAAGCGAAAGCCCTCTCACAAATTGCAGCACATTGTCTTCTAATCCTTCTTCTGTCGAAGCTGAGTCCAATAACGATTACATTGTGCCAAAGAAGCCATCAAAGAACGACAACAACAATTCTCCTTCAGTTGATGAAAGTGCTGCTAAAAGGGCGAAGAGGACAACCGAATCAGACATTGTACAGATTGAGAATAACGTTGAACAGATTGTGTTGTTGGATGAGGAAGAACAAGAAGCTGTTCTGGATAAGAACGGATCCGGATCCGGATTCGGATCTGAAACTCCAGCCCTGGTTACTACGAATAATCTTGCTAGTAATCGAAACAATTCAGATGCGAGTTTGCCAATTACTCCCTTCAGGTCAGATGAAATCAAGAACCGTCAAGCCAGAATTGAAAAATCGGTTAAAGACAATTGTAACAACGGTGATCACTCAGCGAATGGAGGAACAGAGAGTGGACTAGAGCATTGTGTGAAGATCATAAGACAGCTCGAGTGTTCAGGACATATCGACAAGAATTTCAGACAGAAGTTTCTGACTTGGTATAGCTTGAGAGCAACGTCACAAGAGATTAGAGTTGTGAAGATATTCATTGATACGTTTATTGATGATCCCATGGCTTTAGCTGAGCAGCTCATAGATACTTTCAACGACCGCGTTTCGATAAAGCGTTCTGCGATTGGTGGTAGCGGTGCGTCTGCGGTTGTTCCATCTGGATTCTGTATGAAGTTGTGGCATTAGAGATGGGGAGATTTGGGAACTTCTGCTCTGTTTTTTTTTCAAGTCATTTTCAAAACGTTATTCTAATTATTGGGAAATTTGCATTATTGGAACATTTCCATGCAAGAACAGTAGTACTGTTGCTATCGAATAGTTTGTTTTGTCGGATTATTTATTTTATTTTATGGATTTGATTCCATTTATAATTTAGTACTAGACTGAATTATTATAATTTCGTTGAC
CDS Sequence
- >fgenesh2_kg.7__1163__AT4G30200.2
ATGGATTCTTCTCTCGATGGAGCTGCAGGTGACTCATCGAAATGCAATGAAATGAGTGTTGATGAGAAGAGACAGCTTGTTTATGAACTGTCGAAGCAATCACATCTAGCTTCTGAGGTCTTGCAGGCATGGAGCCGGCAAGAGATTCTACAGATCTTATGCGCAGAAATGGGAAAAGAAAGGAAGTATACTGGCTTGACCAAAGTCAAGATCATCGAGACCCTTTTGAAAATTGTATCCGAGAAAAACCCTGGAGAGAATGAAGGAAAGAAGAGAGATTCTGATTGTTTGCCTATTCAGAGAAACACAAAGAGACAAAGGAAGGTCGATAATCCTTCTAGGTATGTGCTTCCAGCAAGCAACAACGTAACAAGCAACAATGCCTCAGGGAGCTGCAGCTCGGTTAATACTAAAGGTGAGAGTACTATCTACTGCAAGAATTTGGCTTGCCGTGCTGTACTGAGACAGGAAGACTCATTTTGCAGAAGGTGTTCCTGTTGCATCTGTCGTAAGTATGATGATAACAAAGATCCTAGTCTCTGGTTAACATGTAGCTCAGATCCTCCATTTGAGGGTGAGTCTTGCGGATTCTCGTGTCATCTTGAATGTGCTTTCAAGACTGAAAAATCCGGTCTTGGAAAAGACAAGCAAAGTGAGGGATGCTGCTTCTATTGTGTCTCTTGCGGTAAAGCAAACAGTTTGCTTGAATGTTGGAAGAAGCAATTGACGATTGCTAAAGAAACCAGAAGGGTAGATGTGCTTTGTTACCGTCTTTTCTTAGTACAGAAACTATTGAAGAGCTCAACAAAATACCGAAATCTGTGTATGGTTGTGGATGAAGCTGTCAAGAGTCTTGAAGCTGATGTAGGTCCTCTCACTGGTCTCCCTATGAAAATGGGTAGAGGAATTGTAAACAGACTTCATTCGGGACCCGATGTGCAGAAACTTTGCTCTTCTGCTCTTGAATCTCTTGAAACTCTAGCAACTAAACCTCCGGATGTTGCTGCATTACCTTCATCTCGCAGCTCCAAGATGCAGCAAGATTGTTCTTATGTATTGAGTAATGAGATATCTGCAGATACAGCAACCACAGGATCAACCAAGATCAGGTTCGAGGATGTTAACGCGACTTCACTTACAGTGGTTCTCGCCTCTAATGAAATTCCCTCACCTCCAAACATCGTCCACTACAGTATTTGGCATCGCAAGGTACCAGAAAAAGATTACCCGGAGAAATCGACTTGCACATTGTTTACTCCAAACACAAGATTTGTTGTCTCTGGATTAGCTCCAGCTTCCGAGTATTGCTTCAAAGTTGTGTCCTATAGTGGAACCAGAGAAATGGGCGTCGATGAAATCAATGTTTTGACACGTAGCGCTGAAGAAGGAGCGAATTGCTCTTCGGGAGTCGAAAGAAGCGAAAGCCCTCTCACAAATTGCAGCACATTGTCTTCTAATCCTTCTTCTGTCGAAGCTGAGTCCAATAACGATTACATTGTGCCAAAGAAGCCATCAAAGAACGACAACAACAATTCTCCTTCAGTTGATGAAAGTGCTGCTAAAAGGGCGAAGAGGACAACCGAATCAGACATTGTACAGATTGAGAATAACGTTGAACAGATTGTGTTGTTGGATGAGGAAGAACAAGAAGCTGTTCTGGATAAGAACGGATCCGGATCCGGATTCGGATCTGAAACTCCAGCCCTGGTTACTACGAATAATCTTGCTAGTAATCGAAACAATTCAGATGCGAGTTTGCCAATTACTCCCTTCAGGTCAGATGAAATCAAGAACCGTCAAGCCAGAATTGAAAAATCGGTTAAAGACAATTGTAACAACGGTGATCACTCAGCGAATGGAGGAACAGAGAGTGGACTAGAGCATTGTGTGAAGATCATAAGACAGCTCGAGTGTTCAGGACATATCGACAAGAATTTCAGACAGAAGTTTCTGACTTGGTATAGCTTGAGAGCAACGTCACAAGAGATTAGAGTTGTGAAGATATTCATTGATACGTTTATTGATGATCCCATGGCTTTAGCTGAGCAGCTCATAGATACTTTCAACGACCGCGTTTCGATAAAGCGTTCTGCGATTGGTGGTAGCGGTGCGTCTGCGGTTGTTCCATCTGGATTCTGTATGAAGTTGTGGCATTAG
Protein Sequence
- >fgenesh2_kg.7__1163__AT4G30200.2
MDSSLDGAAGDSSKCNEMSVDEKRQLVYELSKQSHLASEVLQAWSRQEILQILCAEMGKERKYTGLTKVKIIETLLKIVSEKNPGENEGKKRDSDCLPIQRNTKRQRKVDNPSRYVLPASNNVTSNNASGSCSSVNTKGESTIYCKNLACRAVLRQEDSFCRRCSCCICRKYDDNKDPSLWLTCSSDPPFEGESCGFSCHLECAFKTEKSGLGKDKQSEGCCFYCVSCGKANSLLECWKKQLTIAKETRRVDVLCYRLFLVQKLLKSSTKYRNLCMVVDEAVKSLEADVGPLTGLPMKMGRGIVNRLHSGPDVQKLCSSALESLETLATKPPDVAALPSSRSSKMQQDCSYVLSNEISADTATTGSTKIRFEDVNATSLTVVLASNEIPSPPNIVHYSIWHRKVPEKDYPEKSTCTLFTPNTRFVVSGLAPASEYCFKVVSYSGTREMGVDEINVLTRSAEEGANCSSGVERSESPLTNCSTLSSNPSSVEAESNNDYIVPKKPSKNDNNNSPSVDESAAKRAKRTTESDIVQIENNVEQIVLLDEEEQEAVLDKNGSGSGFGSETPALVTTNNLASNRNNSDASLPITPFRSDEIKNRQARIEKSVKDNCNNGDHSANGGTESGLEHCVKIIRQLECSGHIDKNFRQKFLTWYSLRATSQEIRVVKIFIDTFIDDPMALAEQLIDTFNDRVSIKRSAIGGSGASAVVPSGFCMKLWH