Information report for fgenesh2_kg.6__2487__AT5G24930.1
Gene Details
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Functional Annotation
- Flowering repressor in long days (LD) and short days (SD) and acts on the expression of FT and FT-like genes as well as on SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 (SOC1).
Homologous
- Arabidopsis thaliana: AT5G24930.1
- Brassica napus: BnaC07G0361000ZS, BnaA06G0333200ZS, BnaC09G0055900ZS, BnaA09G0066400ZS, GSBRNA2T00133568001, GSBRNA2T00146006001
- Brassica oleracea: XP_013611790.1, Bo9g011530, Bo7g096320
- Brassica rapa: Bra009805, XP_009151020.1, XP_009111648.1, Bra036528
Gene Resources
- Pfam: PF06203 PF00643
- UniProt: D7M3T2
- RefSeq: XP_002872134.1
- EMBL: GL348718
- AlphaFoldDB: D7M3T2
- InterPro: IPR000315 , IPR010402 , IPR045281 , IPR049808
- PANTHER: PTHR31319 , PTHR31319:SF77
- PROSITE: PS50119 , PS51017
- OrthoDB: D7M3T2
- CDD: cd19821
- eggNOG: KOG1601
- STRING: 81972.D7M3T2
- HOGENOM: CLU_028225_3_2_1
Sequences
gDNA Sequence
- >fgenesh2_kg.6__2487__AT5G24930.1
ATGCCAAGTAATTTCATCTCAATACAATAAAATTACGTTGTTTGGCTAAGATTTCACCACGTGTCAACATTTCATTCGATCTAGATGGATACCCATGGACCCCACATGGATAGACTCATTGACACGCTCATGTGAAGCCATAGTAACACCAACCACAAAAGAAAGAGAAAGAGAGAGAGACCCTGAAACTTAGAGAGAGAAAAATGGCGTCTAAGCTCTGCGATTCGTGCAAATCGGCGACGGCGGCGTTATACTGCCGACCAGACGCAGCGTTTCTCTGCTTAAGCTGCGATTCAAAAGTCCACGCGGCGAACAAACTCGCGTCACGACACGCGCGCGTGTGGATGTGTGAAGTGTGCGAGCAAGCACCGGCACACGTCACGTGCAAAGCAGACGCGGCCGCGTTATGTGTCACGTGCGACCGTGATATTCACTCTGCTAATCCGTTAGCTCGCCGTCACGAACGCGTTCCCGTTACTCCGTTTTACGATTCCGTCTCTAGTGACGGTTCCGTTAAACATACTGCCGTTAATTTCCTTGACGACTGTTACTTATCCGATATAGATGGTAACGGAAGCCGTGAAGAAGAGGAGGAAGAAGCTGCTTCGTGGCTGCTTCCGAATCCGAAGACTACGACGACGGCGACGGCGGGGATGGTTGCTGTTACTGCAGCTGAGGAAGTTCCGGGAGATAGCCCGGAGATGAACACGGGTCAACAGTATTTGTTCTCGGATCCGGATCCGTATCTGGATCTGGATTACGGAAGTGTTGATCCGAAAGTGGAATCGTTGGAGCAGAATAGCTCCGGGACTGATGGTGTTGTTCCGGTGGAGAATCGGACGGTTAGGGTTCCGACGGTGAACGAGAATTGCTATGAAATGGATTTTACCGGAGGATCTAAAGGTTTTGCTTATGGTGGTTACAATTGCATCAGTCACAGCGTAAGCTTCTTAATTAATTAGATTAACCATAGCGATTAATTTAATTGATTCTGTTGATAAAACAATTATTTATCCAAAAAAATCTTTAGGGTTTAGACTTTGATGAGAGCTAAATTATTAATTTAATAGGAACTAATGATTGTGTGACTAAAATTTAGGGTTATAGGAGAGTAACAAGTGTAAATTAATCTGTACTTAGAAGAAATACCATGATAATCTAATTATATACTAATCAAATAATTTTTGTCTGTTTTGTTTAATCAAAGTTTAGATCTTTGTGGTATTGAGTGACTTAAAGTTTCATCTAAAATTATTAATTTAATCGGAAGAAATAGTTTCAGGCGAGCAACATGCATAAGCTACTCTAATCATATAATAGTAATCCTCAATTTAATTATGTAGTCATATAAGTTAAGTTCTAAGTATGTATTGACTTTTAAACTATAGTATTTGTCACTTATTTTTAATGGCTAGTCAAAGAGTTGTTTTTGATCTAATGGTTGGTTGGTTATTGCAGGTCTCATCATCGTCGATGGAAGTGGGAGTGGTGCCAGATGGTGGCTCTGTGGCCGATGTTTCGTATCCTTACGGTGGTCCTGCAACCAGTGGAGCAGATCCCGGGAGCCAGCGGGCTGTTCCGCTGACTTCAGCTGAGAGAGAAGCGAGGGTGATGAGGTACAGAGAGAAGAGGAAGAACAGGAAGTTTGAGAAGACGATAAGGTATGCTTCAAGGAAAGCTTATGCGGAAATGAGACCGAGAATCAAGGGACGGTTTGCGAAGCGGACGGATACAAGTGAGAGCAGTGATGTGGTTGGTCATGGTGGTATCTTTAGTGGGTTCGGACTTGTACCTACGTTTTAGATATCGAGAGAGAAAGAGAGAGACTCTAAATATGGAAGTTGGTTTGGTGTTTGTTTTAGTAATAATGTTTTAACGAACGTTTTTATTTAAAACGAGTTGTTTGTTTTTGTTGATGAGTTTTTTAATTAGTTGTGGGCGAGAGGAAGAGAAGTGAGTGGTGGTGTTTATAAGTAACCTGT
CDS Sequence
- >fgenesh2_kg.6__2487__AT5G24930.1
ATGGCGTCTAAGCTCTGCGATTCGTGCAAATCGGCGACGGCGGCGTTATACTGCCGACCAGACGCAGCGTTTCTCTGCTTAAGCTGCGATTCAAAAGTCCACGCGGCGAACAAACTCGCGTCACGACACGCGCGCGTGTGGATGTGTGAAGTGTGCGAGCAAGCACCGGCACACGTCACGTGCAAAGCAGACGCGGCCGCGTTATGTGTCACGTGCGACCGTGATATTCACTCTGCTAATCCGTTAGCTCGCCGTCACGAACGCGTTCCCGTTACTCCGTTTTACGATTCCGTCTCTAGTGACGGTTCCGTTAAACATACTGCCGTTAATTTCCTTGACGACTGTTACTTATCCGATATAGATGGTAACGGAAGCCGTGAAGAAGAGGAGGAAGAAGCTGCTTCGTGGCTGCTTCCGAATCCGAAGACTACGACGACGGCGACGGCGGGGATGGTTGCTGTTACTGCAGCTGAGGAAGTTCCGGGAGATAGCCCGGAGATGAACACGGGTCAACAGTATTTGTTCTCGGATCCGGATCCGTATCTGGATCTGGATTACGGAAGTGTTGATCCGAAAGTGGAATCGTTGGAGCAGAATAGCTCCGGGACTGATGGTGTTGTTCCGGTGGAGAATCGGACGGTTAGGGTTCCGACGGTGAACGAGAATTGCTATGAAATGGATTTTACCGGAGGATCTAAAGGTTTTGCTTATGGTGGTTACAATTGCATCAGTCACAGCGTCTCATCATCGTCGATGGAAGTGGGAGTGGTGCCAGATGGTGGCTCTGTGGCCGATGTTTCGTATCCTTACGGTGGTCCTGCAACCAGTGGAGCAGATCCCGGGAGCCAGCGGGCTGTTCCGCTGACTTCAGCTGAGAGAGAAGCGAGGGTGATGAGGTACAGAGAGAAGAGGAAGAACAGGAAGTTTGAGAAGACGATAAGGTATGCTTCAAGGAAAGCTTATGCGGAAATGAGACCGAGAATCAAGGGACGGTTTGCGAAGCGGACGGATACAAGTGAGAGCAGTGATGTGGTTGGTCATGGTGGTATCTTTAGTGGGTTCGGACTTGTACCTACGTTTTAG
Protein Sequence
- >fgenesh2_kg.6__2487__AT5G24930.1
MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKHTAVNFLDDCYLSDIDGNGSREEEEEEAASWLLPNPKTTTTATAGMVAVTAAEEVPGDSPEMNTGQQYLFSDPDPYLDLDYGSVDPKVESLEQNSSGTDGVVPVENRTVRVPTVNENCYEMDFTGGSKGFAYGGYNCISHSVSSSSMEVGVVPDGGSVADVSYPYGGPATSGADPGSQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTSESSDVVGHGGIFSGFGLVPTF