Information report for fgenesh2_kg.6__2319__AT5G23260.2
Gene Details
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Functional Annotation
- Encodes a MADS box protein. Regulates proanthocyanidin biosynthesis in the inner-most cell layer of the seed coat. Also controls cell shape of the inner-most cell layer of the seed coat. Also shown to be necessary for determining the identity of the endothelial layer within the ovule. Paralogous to GOA. Plays a maternal role in fertilization and seed development.
Homologous
- Arabidopsis thaliana: AT5G23260.2, AT5G23260.1, AT5G23260.3
- Brassica napus: BnaC07G0373800ZS, GSBRNA2T00082681001, GSBRNA2T00113632001
- Brassica oleracea: XP_013596702.1, Bo7g097810, XP_013596700.1
- Brassica rapa: XP_009136373.1, Bra013028, XP_009136371.1
- Raphanus raphanistrum: RrC5510_p4
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: D7M1P7
- RefSeq: XP_002872046.1
- EMBL: GL348718
- AlphaFoldDB: D7M1P7
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS00350 , PS50066 , PS51297
- Gene3D: 3.40.1810.10
- CDD: cd00265
- eggNOG: KOG0014
- STRING: 81972.D7M1P7
- HOGENOM: CLU_053053_0_1_1
Sequences
gDNA Sequence
- >fgenesh2_kg.6__2319__AT5G23260.2
TCATCCAACCTCAAACTCCATTTCCAGATCCCCAAGAACACAGCTCAACAAAAAGTACTTTAAAAAGGCGACTGATCTCTTTCTCCCTCTATCTCTCTCTATATATATTTTTCACTAGCTCTTTCACACACACTCACTCTCTTTTCTCTCTCTATCTCCTTTCTAATTCACACATCAAGATTCAAGAATCAAACACCATCCTTGAAATGAATCTTGTAATTAACTAATTCTAGGGTTTTCAGATTCTTGTTTTTTTTTTTAATTAGGGTTTCTTTTAAGTTGATCTAGCTTCCATATACATTTGAATCAGGAGGAAGAGGGAGCAACTAACAAGAGGAAGAAGAGAGAGATGGGGAGAGGGAAGATTGAGATAAAGAAGATAGAGAATCAGACGGCGAGGCAAGTGACCTTCTCCAAGAGAAGAACTGGTCTTATGAAGAAGACTCGTGAGCTCTCTATTCTCTGTGACGCTCACATCGGTCTCATCGTCTTCTCTGCCACCGGAAAGCTCTCAGAGTTCTGCTCCGAACAGGACAGGTGAACTTTCTTCCTCTTCTTCTTCTTTCTCAAATTAGGGTTTCAGAGATCTATACATACATGTGTATGTATCCATCTAATTAATGAGGAAATGAGCTAGATATATAACTCGTGCTTGTGAACAGACAGTTTTCATCATTAGTTTCTGAAGTAGCAGGTGTCATGACTCATGAGTCTGGTTTAGATTTTAATTTGGCCCAGAAGTTAAGAATCTTTGATCCAATATTTTTGTTTCTTGCAGTATTTAATTTGTATATATGTGCTCATGCATGTATCTTATCATATTTAATACGTATGGGTCAAAATTATATATTTTTTACAACGGCCTAACAAAGATTTTTCTGCAAAGCTTTGACATTTCTTGATCAATATTTTTATAATCAGATCCCAATATGTGTAGATGTCATATTTACGACATATACATACCTATATATATATATATGTATAAGTCTATATGTCGTTAATGATTCAATTTAGTACAATTATAAAGGTATGCAAATTAGAAGTGTTAATCTAAGTCATGAAGCATGAAGAAATATTTATTTACATATATCCATAATAGGAGAAGAAGGGTGGGCTATAATAGTTTGAGCTCAGCTTACATAAAACAAAGGGTAAAACACCTTTTAATTATGTTTTCTCCAAACCACTTTTATGGCCAAAATATTATATTTGTTATTTGAGTCTAGTGCTCCTCCAATTACTATTGAAGTCTTGACGTGTAACATTAAAGATGCTAATTTGATCACATTTTATATTTAGGATGCCTCAACTCATTGACCGATACTTGCATACCAACGGACTGCGACTTCCTGATCATCAGGACGACCAGGTATATATACACACGCATACTTATTCCTTTGTGTTACCTATTGACCACTAAGAAAATCACACATATCTTGAAAAATATTATTCATTTTGAGTTTTTTTTGTTTGTGTAGGATCAATTGTACCATGAGATGGAAGTATTAAGAAGAGAGACATGTAACCTTGAGCTTCATCTGCGTCCCTATCAAGGACATGACTTAGCCTCCATTCCTCCTCATGAGCTTGACGGACTCGAGCGACAGCTCGAACATTCTGTCCTCAAAGTCCGTGAGCGTAAGGTAATGCAACATATGTCCATATCAATATATATTCTCATAAAACTATATTTTGGTTACACTTTTGTTTGATCTCTGCTATTAATATATTGAAGAATGAGTTAATGCAGCAACAGTTGGAGAATCTAAGCAGAAAGGTCACTCTCTCATCACTTTTTAAACTCTAATAATCTTATTATACCGCGGGTTTAATGATCATTACCGTGTCTATCTATGCATATAATATATCAGAGGCGGATGCTAGAAGAAGATAACAACAACATGTACCGTTGGGTAAGTTTGGTTTCTAAAGAATGTTAAATATGTTATCACATTTACATTTGAATGACATTTTTCTATATATAACGGTGTTTATCGCAGCTTCATGAGCATCGTGCAGCGATTGAGTTTCAGCAAGCTGGGATAGAGACGAAACCAGGGGAGTATCAACAGTTTCTAGAGCAGCTTCAGTACTATAAACCAGGGGAGTATGATCAACAGTTTCTAGAGCAGCAGCAACAACAACAACCAAACAGTGTTCTTCAGCTTGCTACACTTCCTTCCGAGATTGATCCTAATTACAATCTCCAGCTTGCTCAGCCTAATCTTCAAAACGATCCAACGGCCAAGAGCGATTAATATAATCCTCAATAGATATCTACTCGTTCTTTCCGGAGACAGATTAATGAACTTTTACTACCTATATTTTTATTAGCCAATGTCTTCTTTTGTGTGGCCATGGAACCTTGTTTGAAGTATAATTCACTTGACATATTATTGGTTATATAATTAATCATCATTATTAC
CDS Sequence
- >fgenesh2_kg.6__2319__AT5G23260.2
ATGGGGAGAGGGAAGATTGAGATAAAGAAGATAGAGAATCAGACGGCGAGGCAAGTGACCTTCTCCAAGAGAAGAACTGGTCTTATGAAGAAGACTCGTGAGCTCTCTATTCTCTGTGACGCTCACATCGGTCTCATCGTCTTCTCTGCCACCGGAAAGCTCTCAGAGTTCTGCTCCGAACAGGACAGGATGCCTCAACTCATTGACCGATACTTGCATACCAACGGACTGCGACTTCCTGATCATCAGGACGACCAGGATCAATTGTACCATGAGATGGAAGTATTAAGAAGAGAGACATGTAACCTTGAGCTTCATCTGCGTCCCTATCAAGGACATGACTTAGCCTCCATTCCTCCTCATGAGCTTGACGGACTCGAGCGACAGCTCGAACATTCTGTCCTCAAAGTCCGTGAGCGTAAGAATGAGTTAATGCAGCAACAGTTGGAGAATCTAAGCAGAAAGAGGCGGATGCTAGAAGAAGATAACAACAACATGTACCGTTGGCTTCATGAGCATCGTGCAGCGATTGAGTTTCAGCAAGCTGGGATAGAGACGAAACCAGGGGAGTATCAACAGTTTCTAGAGCAGCTTCAGTACTATAAACCAGGGGAGTATGATCAACAGTTTCTAGAGCAGCAGCAACAACAACAACCAAACAGTGTTCTTCAGCTTGCTACACTTCCTTCCGAGATTGATCCTAATTACAATCTCCAGCTTGCTCAGCCTAATCTTCAAAACGATCCAACGGCCAAGAGCGATTAA
Protein Sequence
- >fgenesh2_kg.6__2319__AT5G23260.2
MGRGKIEIKKIENQTARQVTFSKRRTGLMKKTRELSILCDAHIGLIVFSATGKLSEFCSEQDRMPQLIDRYLHTNGLRLPDHQDDQDQLYHEMEVLRRETCNLELHLRPYQGHDLASIPPHELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDNNNMYRWLHEHRAAIEFQQAGIETKPGEYQQFLEQLQYYKPGEYDQQFLEQQQQQQPNSVLQLATLPSEIDPNYNLQLAQPNLQNDPTAKSD