Information report for fgenesh2_kg.6__1302__AT5G13480.1
Gene Details
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Functional Annotation
- Encodes a protein with similarity to yeast Pfs2p, an mRNA processing factor. Involved in regulation of flowering time; affects FCA mRNA processing. Homozygous mutants are late flowering, null alleles are embryo lethal.
Homologous
- Brassica napus: BnaA03G0053800ZS, BnaC03G0061800ZS, BnaA02G0048600ZS, BnaC02G0056000ZS
- Brassica oleracea: Bo2g011320, Bo3g009200
- Brassica rapa: Bra006202, Bra023416
- Citrullus lanatus: Cla97C01G007820
- Juglans regia: Jr05_01270, Jr14_01760
- Manihot esculenta: MANES_04G160100, MANES_11G004700
- Populus trichocarpa: POPTR_003G197900v3
Gene Resources
- Pfam: PF00400
- UniProt: D7M5T6
- RefSeq: XP_002873615.1
- EMBL: GL348718
- AlphaFoldDB: D7M5T6
- InterPro: IPR001680 , IPR015943 , IPR019775 , IPR020472 , IPR036322 , IPR045245
- PANTHER: PTHR22836 , PTHR22836:SF0
- SUPFAM: SSF50978
- PROSITE: PS00678 , PS50082 , PS50294
- Gene3D: 2.130.10.10
- CDD: cd00200
- eggNOG: KOG0284
- STRING: 81972.D7M5T6
- HOGENOM: CLU_000288_77_2_1
Sequences
gDNA Sequence
- >fgenesh2_kg.6__1302__AT5G13480.1
TGTACTAATACAACGGTTGCCTACTGATGTTGCTGATTGGTGTTTGGTGGAGGGCCGGGAGGTAAAGGCGGCTGCGGCTGCTGCTGCTGCACGAAATAAAATACATAGAACGTATTAGTCAACGAATTTTGTGCTATTTTAAGCTCAGCAATAGCATATACAACATCTAATCATACCAAAGAACCTAGCTAGTAAGTTTCAAACGAGCTGCAAAAGTTATATATTGTGGTTCAATCGTATCAGGATGTTTTGCATTGTTGTGCAGTAGACATCTTTGCCTATTTGTACATATATGTATGCGAAACCTTTACGGGTATACTAAACAACAAAAGACTAGTGTTTAAATGAGACCTGTTGGAAAGGGTTGTTGTAGCCTGGAATCATTTGTGGACGGTTGAAACCACCACGTCCCTGGGGATACATTTGGGGTCCACCATTGCTTGGTGGTCCTTGAAATACTCCTGAAGGAGCACCCATAAAATGACTTTGCGACATCTGAGGATTCATGCCACCTTGCATTCCCTATTCCAACAACAAGTGAGGATTAATATCTCTTTCTACACAGTAAAAATGATTTTTAACCTCCCTAAAATATCACTAAGAAAATAAAAAAAGAGGAATCCAACTCATGGGGTACCCACAAAAGACAGGCTTAAGTTGCGGTCGAATTACAAGAGATCTGAGAGTCATACCATTGATCCAGGCATCTGATGAGACATAGGCATTGAGGAAGGTGGCATGTGACCGTGAGGAGGCATTTGCATAGGCCGGGGAAGATGATGAGGGTGCAATGGCATATGAGATGATGGTGGTAGCTGATGGTGAGGCATATTGGGCATTGGAGGCATTTGCTGGGGATGACCTTGGTGGTGGTGTTGTTGTTGCTGATACCCTTGCTGCTGGCCACTTCCAAGAAGCGATGGGTGGGGACCAGGTGGCAGAGGAGGAGCTCCCAGTGCCATGGAACCTGGAAGAGGCTGTTTATGTTCCCCTTGAGAGGATGCATCAAATGGCATTGCTATTCCAATTCCTGGGATGGTCCCCTCGTTCCGTGTCAGCCCAGGCACAAATGCTCCAGGAAATGGCGATGCCTCAGATGGTTGGAAAATATCAGTCTCGCGATTACCAAAACCTTGTTCATTATAGCCTGACACAAATTACAGTAATTAGTACACACAAATTACAGCTTCAATTCGGTACTAAACAATAAATAGAAAACACTAATTTCTGACAAATGGAACTTGAAAGTACATGCTTTAAAACAGTAAGTGAGACACTAATGACCAAAGATTTTCTCGAGAGCCAAAAGTACTTGGGTCTGATTTTTAAAGCCTGTAGAAATCTGCACCCATATCAGACCAGCTCAGCTTGACCAGTCAAGTCTGTTCTTTTCGACAAAAAATTTCAGTTAATCATGGTGCCATATGGCTGTTCGAGCCTGAACCTTAAAAAGTCAAGGTCCATTTCGAACAAGCCATTATAGGAATAGACTGACCCCTGCCAGGGCCTGACCAGTTAAGCCTATCACAGCATCCTTCCTACTCATATGGATAAGGACATAGTATTATGCACTACCCACACCTTATCCATCGTGTCTACTAAAAAATCAGATACTAATAGCCTAAAAACAAACCTTGGTTCTGCATAAGGACATCTCGGGGATTATCTGCAGGCCTGTTTCTGCACCAAAACTTGGTTGTGTGATCATTGCTACCACTGCAGATAATAGGGGGAAAAATCAATATCTGAAGCATTTATTTATTCAAGAGCACAAGGAACCACAACACATCATAGAATAAAACTGTAAGGAACTCATAGCACCGGACTATTGAAATTGCTACCTGCAAAGAAGATATCCAATAGGATGCCATGCAAGATCCCAAACACTGTTATCATGAGCATTTGGGATTTCAATCTGCGGGTTTTCATGCCTGGGAATTAAGAAAAGTTTTTCATAATTAGATACACCTCAAAAAAAAACCACAAAATATAAGGTAAAGTAAGATGCTACTAGTATATGTAGATACCTCATGACTGAATATAAAATGTAGACAAGAAACAAGAGTTGACAAATCCTTAGAAGTGATTAAAGCAATAGCAGCATAAACGAATAAATAAAACAGCATATTGCTGCACAACAGTACCTACCCCACAATCCAATGACAAATGGAGCCGTCAGAGCTCCCACTGACAAAATACTCCTCATGGAAGGGATGCCATGCCAAAGCTTTAACAGAGTTCGACCACTTTTAATTAGAAATAGTTGCAAATTAGAAATATCGAAGAAACAAATTGATAACTCGCATCCATGGGATAATGTCTCATATGTCGACCTCCATTAAGTAAAGCATGGGTACAATGATAATCTTTCAAAGGCATATACTTTAGAGTCCTAGTCAAGGTACAGAAAAGTCATTTTATGAGGGCAGTTTGTCTGCTTTCACGTGTTTGAAGACATGGTCATTAGAGAATTTGACAGCTTACATGTTACATCTTTCGTGTGCCCACGAAAGGATTGAAGCTCTTTCATAGTCCTTATATCGTACAGCTGCAGATTACATGCATAAGTGTCATACAAATGTTTCCATAATGCACGGACAAAATCTAAGTTACAAATCAATACACCCCCCAAGAAAGTTAGCCTTACCTTAATTATCTGATCTTTCGAGGCCGTTAAAAGCCAATTGCCATTTTGGTTCCACTTCACGCTAAGCACTATGTTTTTGTGACCATGACTGCAGAAGTGAGAATAGGCCATCAAGTTCGTCAAAGCTTTGAACGTGAAACAATAATAAAATACATAATACATTTACGCACTACTTACAGTGAGCAAAGCTCTCTCTCAGTTCTAGTATCCCACAGTTTGACAAGTTGGTCTTTTCCACCTGTTAACACAGATTAAACAGCGAATAATCATAGAGAGAAGCTCTGAAATATACAACTGTTTCTTTCTAATTAAATTATCAAAATAGAAGTCTATACAATAATGTACCAGAAACTAGTAGGGACTTTGTGGGGTGCCAGTCAACGCTCTTGACATCCCAACCATGGCCTGCCTGAGTTCAAAATATAAAGAACCCTTTGGTCACGTAAAAAAAATAGAAGAAAATACAAATATGAAGAAAATTGTGAAAACATGCCTTCAAAAGGATAGGAAAAAAAAGCACCAATTTGGAGCCTTCAAAACTAACTAATATTTCCATGGCATGACACCAAACCGAATCTCAATAATACTTTTTCTGTGTAGCCTAAGGGTCCAATTATAATAACATACATCACATTCCAAATGGCCTTCTGAATTCAAACTAGAAGAGAAAGCAACTACGAAATTCACTATCTGCCGATAATCTGTTCAGATCACATTACCGGTTAATGAGCATTCTTCTTGGCACTTGGCAAAATCCCAGACTTTAACAGTCGTATCATCAGAACACGAGCAGAACTTTAAATCTGTTTTACAGAAACTGTTCGATACGTACTGTTAAAATTTAAAGAGATTCATTTAATATACTAACATATCAAACCTTTTTTTTTACCTTAAATCGCGAATTGATTCCTTGTGAGCAGTTTTATTGGCTTTCACATTGTTCATATTGTTCTGCCAATACCTGATACATAAGAAACAATTGATCTTTACCGTCACAGCAAAAACTAAATCTGAATCATAGAATTCCGAGCTTTTCATTTTCATTATCACAAGTTTGAGAGTGAAAGAAAAAAAATTACTTTATTGTGCCTCCATCATCACCAGAAACCATATAATTGTCATTGTGGCTCCATACCATCGACCTTATAGGTTGATCATGTGCCTGATTTTGACAGCAGATTTTAACAGTCAATACCAGGAGCAACAGCTATAGAGGAATCAAAACAGAAGTTTCCAAAGATTAGTAAACACAAGCTGAGAAACGAACCTGAAGAATCATTTCAAAATTAAAAGATTGCCCATTCCAAAGAGTAAACTCCCCACTTTGGGAGCCCGTGATAAGACGTCGGCCTGAAGGTGTCCACTAAATACAAGAAACCCAATCAGCAATGATCGCATTAAGTTGGCATAACAGAGTTAAGAAAGAAAAAAGAAAAGAAAGACGTTAGCTTTCTTGAATAGACAAACATGGCAAACAGGGAATAATACAAAGCACCCAGCTGTTAGAGGGAAATACCAATACACGGTTGATTGAACAACGATTCTTGTTTAGAGATGTGTGAACAAACTTTGCAGTAAAGCTTGTTGAAGGATTATCTGAATAGGCAACTGTGGGAAGCATCTGAAACATTGATATTTAAGTTAGAGCAGAAAATCAAAAATCTTATTGCATAACACAGAAAAGCAAAGAAATCTAACATCAACTGCTGCAGCTGGGGTTGGTTGTAAAGAGGTCCTATCCCTTGAGTCTCGCTGCCATGTTCGAGCCTGAACAAAAACATAAACTCTATTCCTTTAGTTCCACATAATCAATCAATTAAGAAAAGAAATACTGTGACAGCAATGGGAATACAGTACCTGAATGTATTTCACAACGGTGCTGGTGTAGTCAACAGCTCTTCTCTGTGTATGTTTTCTCATTCGTTTCGCCCCAAAACTGTCTACATTTGCTGCAACATCAGACAGAGAGACATCAGATCTCACTAATCCAAAAAAAATAAGAAGAAGAAGAAGCTCAAGTCTACAATACTACTTACGGTCGAAGGGGCCAGAGGGGTGGTGGTAGTCGGGATTGATGTTAGAGGAAGAAGCTGACGACTGCCGCATCATCGGTGGTGGTGGCATCTGTGAACCCCTGTGCAAGTCGCCGCCGGCGTACATTGTTGCCCACGAAGAATGAAGACTGATTTATGCTAATCGAATGAGAACTGCGAAAGTGTTCGAATTTAGGTTATCTTGAAACGAGCGTGGGTCTCGTTAGGGGTGGGCGTGTATCAAAATTCGCGAATTGATGACAACCCAAGAGC
CDS Sequence
- >fgenesh2_kg.6__1302__AT5G13480.1
ATGTACGCCGGCGGCGACTTGCACAGGGGTTCACAGATGCCACCACCACCGATGATGCGGCAGTCGTCAGCTTCTTCCTCTAACATCAATCCCGACTACCACCACCCCTCTGGCCCCTTCGACCACAATGTAGACAGTTTTGGGGCGAAACGAATGAGAAAACATACACAGAGAAGAGCTGTTGACTACACCAGCACCGTTGTGAAATACATTCAGGCTCGAACATGGCAGCGAGACTCAAGGGATAGGACCTCTTTACAACCAACCCCAGCTGCAGCAGTTGATATGCTTCCCACAGTTGCCTATTCAGATAATCCTTCAACAAGCTTTACTGCAAAGTTTGTTCACACATCTCTAAACAAGAATCGTTGTTCAATCAACCGTGTATTGTGGACACCTTCAGGCCGACGTCTTATCACGGGCTCCCAAAGTGGGGAGTTTACTCTTTGGAATGGGCAATCTTTTAATTTTGAAATGATTCTTCAGGCACATGATCAACCTATAAGGTCGATGGTATGGAGCCACAATGACAATTATATGGTTTCTGGTGATGATGGAGGCACAATAAAGTATTGGCAGAACAATATGAACAATGTGAAAGCCAATAAAACTGCTCACAAGGAATCAATTCGCGATTTAAGTTTCTGTAAAACAGATTTAAAGTTCTGCTCGTGTTCTGATGATACGACTGTTAAAGTCTGGGATTTTGCCAAGTGCCAAGAAGAATGCTCATTAACCGGCCATGGTTGGGATGTCAAGAGCGTTGACTGGCACCCCACAAAGTCCCTACTAGTTTCTGGTGGAAAAGACCAACTTGTCAAACTGTGGGATACTAGAACTGAGAGAGAGCTTTGCTCACTTCATGGTCACAAAAACATAGTGCTTAGCGTGAAGTGGAACCAAAATGGCAATTGGCTTTTAACGGCCTCGAAAGATCAGATAATTAAGCTGTACGATATAAGGACTATGAAAGAGCTTCAATCCTTTCGTGGGCACACGAAAGATGTAACATCTTTGGCATGGCATCCCTTCCATGAGGAGTATTTTGTCAGTGGGAGCTCTGACGGCTCCATTTGTCATTGGATTGTGGGGCATGAAAACCCGCAGATTGAAATCCCAAATGCTCATGATAACAGTGTTTGGGATCTTGCATGGCATCCTATTGGATATCTTCTTTGCAGTGGTAGCAATGATCACACAACCAAGTTTTGGTGCAGAAACAGGCCTGCAGATAATCCCCGAGATGTCCTTATGCAGAACCAAGGCTATAATGAACAAGGTTTTGGTAATCGCGAGACTGATATTTTCCAACCATCTGAGGCATCGCCATTTCCTGGAGCATTTGTGCCTGGGCTGACACGGAACGAGGGGACCATCCCAGGAATTGGAATAGCAATGCCATTTGATGCATCCTCTCAAGGGGAACATAAACAGCCTCTTCCAGGTTCCATGGCACTGGGAGCTCCTCCTCTGCCACCTGGTCCCCACCCATCGCTTCTTGGAAGTGGCCAGCAGCAAGGGTATCAGCAACAACAACACCACCACCAAGGTCATCCCCAGCAAATGCCTCCAATGCCCAATATGCCTCACCATCAGCTACCACCATCATCTCATATGCCATTGCACCCTCATCATCTTCCCCGGCCTATGCAAATGCCTCCTCACGGTCACATGCCACCTTCCTCAATGCCTATGTCTCATCAGATGCCTGGATCAATGGGAATGCAAGGTGGCATGAATCCTCAGATGTCGCAAAGTCATTTTATGGGTGCTCCTTCAGGAGTATTTCAAGGACCACCAAGCAATGGTGGACCCCAAATGTATCCCCAGGGACGTGGTGGTTTCAACCGTCCACAAATGATTCCAGGCTACAACAACCCTTTCCAACAGCAGCCGCAGCCGCCTTTACCTCCCGGCCCTCCACCAAACACCAATCAGCAACATCAGTAG
Protein Sequence
- >fgenesh2_kg.6__1302__AT5G13480.1
MYAGGDLHRGSQMPPPPMMRQSSASSSNINPDYHHPSGPFDHNVDSFGAKRMRKHTQRRAVDYTSTVVKYIQARTWQRDSRDRTSLQPTPAAAVDMLPTVAYSDNPSTSFTAKFVHTSLNKNRCSINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNDNYMVSGDDGGTIKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWDFAKCQEECSLTGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRTERELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPFHEEYFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPADNPRDVLMQNQGYNEQGFGNRETDIFQPSEASPFPGAFVPGLTRNEGTIPGIGIAMPFDASSQGEHKQPLPGSMALGAPPLPPGPHPSLLGSGQQQGYQQQQHHHQGHPQQMPPMPNMPHHQLPPSSHMPLHPHHLPRPMQMPPHGHMPPSSMPMSHQMPGSMGMQGGMNPQMSQSHFMGAPSGVFQGPPSNGGPQMYPQGRGGFNRPQMIPGYNNPFQQQPQPPLPPGPPPNTNQQHQ