Information report for fgenesh2_kg.5__960__AT3G45880.1
Gene Details
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Functional Annotation
- Histone demethylases which together with JMJ30 modulates the speed of vernalization through the activation of FLOWERING LOCUS C.
Homologous
- Arabidopsis thaliana: AT3G45880
- Beta vulgaris: BVRB_2g031780
- Brassica napus: BnaC03G0608500ZS, BnaA06G0184100ZS
- Brassica oleracea: Bo3g130210
- Brassica rapa: Bra038271
- Daucus carota: DCAR_028364
- Glycine max: Glyma.11G089600
- Gossypium hirsutum: Gohir.A09G109100, Gohir.D09G105701
- Juglans regia: Jr02_11390
- Medicago truncatula: Medtr5g025190
- Populus trichocarpa: POPTR_009G025400v3, POPTR_001G233200v3
- Prunus persica: PRUPE_4G147600
- Rosa chinensis: RchiOBHm_Chr5g0027441
- Sesamum indicum: SIN_1013802
- Solanum tuberosum: PGSC0003DMG400001970
- Vitis vinifera: VIT_02s0087g00950
Gene Resources
- Pfam: PF13621
- UniProt: D7LMT1
- RefSeq: XP_002877440.1
- EMBL: GL348717
- AlphaFoldDB: D7LMT1
- InterPro: IPR003347 , IPR014710 , IPR041667
- PANTHER: PTHR12461 , PTHR12461:SF99
- SUPFAM: SSF51197
- PROSITE: PS51184
- Gene3D: 2.60.120.10
- eggNOG: KOG2508
- STRING: 81972.D7LMT1
- HOGENOM: CLU_016785_6_0_1
Sequences
gDNA Sequence
- >fgenesh2_kg.5__960__AT3G45880.1
TATATGCATATACACATCAATGTTAAACAGAGTCTCAGTATCAGGCTCATCTAATTCAAGAACGTGTCTTGGACTTCGATGCACCTGCTTACATGTGACAGAAAAGCTTAATGTCCTCAATGCGAAACCCACTCTGCATATAACTCGAAACCATAGCCTCCAGCAGTTAAACTTATGTGACCCTCCATAGCTCTGAACACCTTCCCGTACATATCAACCAACCCACTTTGAATCAAACCATTTGATTCAAACCTGAGCTTTATGGCATTCACAAACACTCAGCTGCCAAAATCTAGCCCCATAACCGACAAAATATTTTCTAATAAACCCCAATTTGTGGCATAGGGAGTGAACTTGCTTCCCTGATATTAAATCTGCACTCATGGCGCATGCTTTTAGAACACATCACATTATGGTGTTCAACATAGTCACAAAGAAAGAAGTGGCGTTTTGGTAACCATCCATATCAATACAGCTGATAATAACAATTGCCGAGGAATGAAACTCTCTGTACAGCATTTATCCAATATGTTGCGGGCGATGTCCAGGTGATACACAAATCAAAAAGACGGTTGAGAAACAGCAAGGTCGGTCTTACACCAGATTTCATAATGTGGACTTGCAGCTCATAAGCCCCAGTAGCAATCACATGTGTCAGTTGATTCCTGGGCCAGAGAAGTGTATAGATCTTCGGTTCCAGGTGAAGAAAGACAATCCATTAACCCAAGAATGTCGGAGTCAAGCAACATGTACTTTGATTTTCTGGATATGACGTTGGATAATGGTGGATTCTGGGTTTTGGGGAATGGGATCTGCTTGAAGCTTCGCGGTTTCAAAGTTCTGTTTGGGACTCCTGAGAAGAAGTTGACCATGGAGCCAGTTCCAGAGTTTTTATCTGATTTCCACTGCACATTTTTAACTAAAGAACATATTGAACCAAACACATCCACAAGAGGTTTTCTATAGACAATGGCTTCAGAGATACACCATTAATTCAGGGAACAATCTGAGACAAAAATGAAGTCATCAACAAAAGAGATAATTCAGAGGATTTAAGAGCTTTTCTATCATTTATGGTTCTTTATAATTTCTGGGGGACAAAACTCAAGAAATAGTGGAGAAAGCACCATTGGACATGACAAGTAATAAAATTAACAGCATAATTCTCCTTAGTCCTAACATTACATAATGTAAAGTTAAGATCTTCTCCGAGCTTTCTATTATGACTGATAAAACTCGAACTCAGCAAGCAAAATGTTGTTTCATCTCTTCATACCTCTGCATCACTGGATTCTGAATCTTTGTCTTCTCTCCAAGACAGAACTGGATTGAGTGAAGATGACTGGTATGATAAAGATTGCAAGAAGTTGAAGTAAGCATACTTGATGTCGAACTGCATGTCATACCCTGTAAATTAGATGCGGACGTAACTTATTATATCAGGAGAATTGAAAAATACAGGTTTGCCACCTGAAGACAAACCGAAGAAGGACGCAAAACTAGAAATCTTACAATAGTTCACCGCAATGGTATAGCCACCATCTCCTGGGGTTTGACTAACATGGTGAAACCACATGCTTGGCCTGCAATACGCAGATTGATTATGTGTCAGAATCATGACTGGAAAATCCGATTATGTAGGTCTATCACCCATTTCTAGTCTATGTTTCTTATAAAGCAAAAGTAAGACTGAAGTAGGCACACAAGTGATTAAACTTAAGTAGGTCTAAATTGAGCAGAAAAGTTTCTGAGAATTCTAAATCTGTAGAGCAAAGAGATTGAGATTCTTACAAGTAAAGAATCTCGCCAGCCTTGACGGTACAATGAAACGGCTTTGGGCCATTGAAGAACAACGGATACTTCAATATCTCACTTGCTTCTTTCTCTGGCGAAGGGTATGGATCAACACTAGACCAAGGTACATGCCTCACTGGCTCCTCAATCTCAAGCTTGAACACTTCAGTATCCTACAAAGATTCAAACTTTAACTCAACATCACTCAACAGAAACCAAACTCACTGAAACTTATTAATCTGAGAATCTCACAGACTCGGTGGTAAGAGTAATTAGCCGCCGGATATTGTTCGATATAGAGGCGGTGTACATCAGTCGGAGGAAGAAGAATAAAATGTTTCTCCCCTGAAACAACAGCGTATAGATTCTCATAGTGATCTTTATGAAACGAAGTCACGGAGTCATCAGTACCAATCCAAAGGTTCACAGCTTCCGGCGAACAACCAAACGCCTCCGTAGCCCACGCAATCTCACCGTCGCAGTCTAACGCAACCGTCGAATACTCCGTTCTAAAACAATCATTCTGCTGTTGTAAATACCCAACCTTTTGTCCTTTACACGACGATTGAACAGCCTCAAGAGCCTCCGGGAACAAAACTTTCTCAACATGAGCCGAAGCGAAACAAAGATCTCTATCTCCGGTGACGGCGTCTGCGCAGCCGTTAGGAGTGAGATGTAATGAAACAAAGTCATTTGACAAAGCTCCGGAGAGGTAGGCTGGATCTGACCAGAGTTTTAGAGCTGGCCAATGAGAAATAGCGTTGGAGATTACACAAGGCTTGCTCTGAGACACGTAGTCACGGAGAAACTTCACCGGAGACGGTGGTGAATCAAGACGATCGATTTTAGTTCCTAAACTCAATTCTCTTACTTCTCTCCATAAATTTTGTATCTCTTTAGCCATTGAC
CDS Sequence
- >fgenesh2_kg.5__960__AT3G45880.1
ATGGCTAAAGAGATACAAAATTTATGGAGAGAAGTAAGAGAATTGAGTTTAGGAACTAAAATCGATCGTCTTGATTCACCACCGTCTCCGGTGAAGTTTCTCCGTGACTACGTGTCTCAGAGCAAGCCTTGTGTAATCTCCAACGCTATTTCTCATTGGCCAGCTCTAAAACTCTGGTCAGATCCAGCCTACCTCTCCGGAGCTTTGTCAAATGACTTTGTTTCATTACATCTCACTCCTAACGGCTGCGCAGACGCCGTCACCGGAGATAGAGATCTTTGTTTCGCTTCGGCTCATGTTGAGAAAGTTTTGTTCCCGGAGGCTCTTGAGGCTGTTCAATCGTCGTGTAAAGGACAAAAGGTTGGGTATTTACAACAGCAGAATGATTGTTTTAGAACGGAGTATTCGACGGTTGCGTTAGACTGCGACGGTGAGATTGCGTGGGCTACGGAGGCGTTTGGTTGTTCGCCGGAAGCTGTGAACCTTTGGATTGGTACTGATGACTCCGTGACTTCGTTTCATAAAGATCACTATGAGAATCTATACGCTGTTGTTTCAGGGGAGAAACATTTTATTCTTCTTCCTCCGACTGATGTACACCGCCTCTATATCGAACAATATCCGGCGGCTAATTACTCTTACCACCGAGATACTGAAGTGTTCAAGCTTGAGATTGAGGAGCCAGTGAGGCATGTACCTTGGTCTAGTGTTGATCCATACCCTTCGCCAGAGAAAGAAGCAAGTGAGATATTGAAGTATCCGTTGTTCTTCAATGGCCCAAAGCCGTTTCATTGTACCGTCAAGGCTGGCGAGATTCTTTACTTGCCAAGCATGTGGTTTCACCATGTTAGTCAAACCCCAGGAGATGGTGGCTATACCATTGCGGTGAACTATTGGTATGACATGCAGTTCGACATCAAGTATGCTTACTTCAACTTCTTGCAATCTTTATCATACCAGTCATCTTCACTCAATCCAGTTCTGTCTTGGAGAGAAGACAAAGATTCAGAATCCAGTGATGCAGAGATTGTTCCCTGA
Protein Sequence
- >fgenesh2_kg.5__960__AT3G45880.1
MAKEIQNLWREVRELSLGTKIDRLDSPPSPVKFLRDYVSQSKPCVISNAISHWPALKLWSDPAYLSGALSNDFVSLHLTPNGCADAVTGDRDLCFASAHVEKVLFPEALEAVQSSCKGQKVGYLQQQNDCFRTEYSTVALDCDGEIAWATEAFGCSPEAVNLWIGTDDSVTSFHKDHYENLYAVVSGEKHFILLPPTDVHRLYIEQYPAANYSYHRDTEVFKLEIEEPVRHVPWSSVDPYPSPEKEASEILKYPLFFNGPKPFHCTVKAGEILYLPSMWFHHVSQTPGDGGYTIAVNYWYDMQFDIKYAYFNFLQSLSYQSSSLNPVLSWREDKDSESSDAEIVP