Information report for fgenesh2_kg.5__2158__AT3G57230.1
Gene Details
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Functional Annotation
- MADS-box transcription factor. Expressed in leaf, root and stem, with higher RNA accumulation in guard cells and trichomes.
Homologous
- Arabidopsis thaliana: AT3G57230.1, AT3G57230.2
- Brassica napus: GSBRNA2T00121299001, BnaC01G0045300ZS, GSBRNA2T00130794001, BnaC07G0519400ZS, GSBRNA2T00099980001, BnaA03G0543200ZS, GSBRNA2T00092702001
- Brassica oleracea: XP_013620707.1, Bo1g007520, XP_013595734.1
- Brassica rapa: XP_009115272.1, XP_009138271.1, Bra017638
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: D7LVQ0
- RefSeq: XP_002876404.1
- EMBL: GL348717
- AlphaFoldDB: D7LVQ0
- KEGG: aly:9312472
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS00350 , PS50066 , PS51297
- Gene3D: 3.40.1810.10
- OrthoDB: D7LVQ0
- SMR: D7LVQ0
- CDD: cd00265
- eggNOG: KOG0014
- STRING: 81972.D7LVQ0
- HOGENOM: CLU_053053_2_0_1
Sequences
gDNA Sequence
- >fgenesh2_kg.5__2158__AT3G57230.1
TGGGAAGGGGAAAGATCGCGATTAAGAGGATCAATAACTCTACGAGCCGTCAGGTTACGTTCTCCAAGCGAAGGAATGGATTGTTGAAGAAAGCTAAGGAGCTTGCGATTCTCTGCGATGCTGAGGTTGGTGTTATCATCTTCTCTAGCACCGGTAGGCTCTACGAATTCTCCAGCTCCAGGTACTTTTTTTTTTCTTTCTCTTTGGTTGACTTTTTTTTTTTTTTGGTTTTGGTCCTTCTGATTGATTGATTCATGAAGCAAATTCTAAATCTCGAGTTTTATTTTTTCTTGAATCGATTTCTTGTTAATTTTTTTTATCTGCAAATTCAATTGGTTTAGGGAAAGAATCGTAGATCAAATTAAAACAAAATCCAATATTCATAGATTATAGGTTTTGTAAGTAGGGGGATATGATTACGATATTTGTGTGGAGCATAGATTGTGAGGGACTTGTGGTGTTTATTGAAACATACTAAATTGGGTAGAAACTTTATCAGAAGAGGAAAGGAGGGGAGAAAGTGGTTAGTGGTTGAAGAAACTCTAACTCTCTCCCTCATCAAGTCTTGAAATCACTTTTTTTTTTTTTTTTATAGTCTTCTTGGTTTGGGTAGAGAGGATTTAGAAAGAATCGTCTCTTTTTCACTATTTCTTTTCTTTATTGGCAACTAGTTGGTGGGTTTGATGTACCTAAAATGAGCTGCATTATCTTCTCTTACTATATTGTTAGTACACAAGTGGGGGAATCATTTCTGATTTCGTTGTCATCCATAATCAAGTTTTTGTTTTTTTTTTATTGTTCAACTTGGTCATTTGTTAATGATATGTACGAGTATAGTCTTTCTTTTTGGAAACATTTTGCTATTCGTTAGAAAAATATTATATCATCAATCCCTTCTGAATTTCTACTTTAGGAATTCATTCATTTATTTATTTGAATGTATCATTTGTGTTTATTATTTATTAAAAAAAAAGGTTGAATAAAATCTGGCTCTTAGATCTGTTTCAGAGGGAGAAAGCTTCCATTGTTGTGCAGAGCTTTTGTTGTTTCTCTGTTTTTAGAACTGAGACTCTGTTTTTGTCTTACTTTTTCTCTTCAATAAAGACAGCAAAAAAAGAAAAAGAATTTGTAGCATCCATCAGAGGTGTTACAGCAGAGAAGGAAATAATATTAAGTAGAAAAGATCGTCAGAAATAGATGTAATGGTTCCAAGAGATTGGGGCATTAGATGAGAAATATATTAGAGGCATGTTGTTAAAGGGTCTTTCACGTTTATGTCTCACTGATCCATATCTATACTCTTGTTTACTGATTAGAACTCTGCTTAAACTTCATACATCATATTAGATTTATTGCGAATCTGTATTCCATGTATGCAAAGATGGCTTAGGGTAACAAAATCTATCTAAGTAAAAATTTTGACACTGAAAGATGTAAGGAGAAATGTTGCAGTGGATGTTGCTTGGGTTACCTTACCTATCAACCACACTCTGCAACTATGCAACTACTCTTTTTTTGGCAGCATGAAATCGGTCATAGAGAGATACAGCGATGCCAAAGGGGAAACCAGTTCAGAAAATGATCCCGCTTCAGAAATTCAGGTACTCCTTTTTTGTTACTCCTCCCTATGGATTTCAACGAGGAATTCAGGGACCCAATTCTGTAATTGAGTAAAGAGTAGACAAAACAAGTAACATACTACAACAGAGAGACTGTTACTCGGTGCTTTTGCTAATGTTAGGCTATTTCAACTTCATTAGCATTTCTCAACTTTTGATTCCTCTCAAGCTGATCCTGATTTCATATCGGACTTGCAGAGCATAAATACCACACATCATATGTTGAAGTAGGGTTTGCTATAAAACACATGTCATGCAACGTGACCATCAGATTACATACATGATGTTGCATGTTCTTTTTCAAGAATCCGTTCTAGACTAGATAACATATTAATCCAAAAACAAAATACTTTTTTTCTTAGTTTCAATCACCTGAAAACCTATTTCTACTATATTCTAGTTCTGGCAAAAGGAGGCTGCGATTCTAAAGCGACAGCTACATAACTTGCAAGAAAACCACCGGTATGTTTTGCATCCTCTGAGTTCTTCAAACACTCTTGAACAGGGAATGATGTACTAAAATGCAAAATGATAACATATATGGAGTCCAAGGCTAGATTTTGCAGAACCCAAAAGCATCCTACCACCTTCATAGGAATGGTTGATAGTAGTAATAACCAAAAAGCCAAATGGATGTTTTCCCCAAAGAATTACCATTGTATTTCTACCACCTCCAGAGTTATATACATCCACACATCTAAAACATCCATAAGAAGGAAATAACCAAACACTTTCACACTCCCCATCTTTTTCTTGTTTTGTTTTGGTGAATTAGGAAATGTATATAGTAATTCTGGAAAAGTATGCATATTCAGAAGAGCTTGTACTTGACAGGCAAATGATGGGGGAGGAGCTCTCTGGACTAAGTGTAGAAGCTTTACAGAATTTGGAAAATCAGCTTGAATTGAGCCTTCGTGGGGTTCGAATGAAAAAGGTTTTGTTGCTGTGACAAATAAGTCACATTTTGGTACCATTTAGAAGAAGTAATGGATTTACTCTATCTACAATCTTCTTGCCTTTTGCAGGATCAAATGTTAATCGAAGAAATACAAGTACTCAACCGAGAGGTGGGACTATGGTTACTGTAATATAGGTTTTAGACATTTTCCACTGTGTTGGTAAGCACAATGCTGATTCTTATTTATTCGGTTGCAGGGGAATCTCGTGCACCAAGAGAATTTAGACCTCCACAAGAAAGTAAACCTAATGCACCAACAGAACAAGGAACTACATGAAAAGGTACCTTTGGGTTTTGGGAAGTATCTGGGAGCCAAGATTATCTTTAAATTGCTAGAAAATTTTGTTCTTATCTGAAGATAATATGTCGTTATTCCAGGTTTCAGAGGTTGAGGGTGTGAAAATCACAAACAAGAATTCTCTTCTCACAAATGGTCTAGACATGAGAGATAACTCAAGCGAACATGTCCATCTTCAGCTCAGCCAACCGCAGCATGATGAGACGCATGCAAAAGCTATCCAACTCAACTATTTTTCCTTCATTGCATGATGATATATTCGGTGTGCCGACACACTTATGTTGACCTCATCGGAATCATATCTCAATTAACTGTATCAGTTTGCAATCCCTTTCTATCAAACACCAGCTTTG
CDS Sequence
- >fgenesh2_kg.5__2158__AT3G57230.1
ATGGGAAGGGGAAAGATCGCGATTAAGAGGATCAATAACTCTACGAGCCGTCAGGTTACGTTCTCCAAGCGAAGGAATGGATTGTTGAAGAAAGCTAAGGAGCTTGCGATTCTCTGCGATGCTGAGGTTGGTGTTATCATCTTCTCTAGCACCGGTAGGCTCTACGAATTCTCCAGCTCCAGCATGAAATCGGTCATAGAGAGATACAGCGATGCCAAAGGGGAAACCAGTTCAGAAAATGATCCCGCTTCAGAAATTCAGTTCTGGCAAAAGGAGGCTGCGATTCTAAAGCGACAGCTACATAACTTGCAAGAAAACCACCGGCAAATGATGGGGGAGGAGCTCTCTGGACTAAGTGTAGAAGCTTTACAGAATTTGGAAAATCAGCTTGAATTGAGCCTTCGTGGGGTTCGAATGAAAAAGGATCAAATGTTAATCGAAGAAATACAAGTACTCAACCGAGAGGGGAATCTCGTGCACCAAGAGAATTTAGACCTCCACAAGAAAGTAAACCTAATGCACCAACAGAACAAGGAACTACATGAAAAGGTTTCAGAGGTTGAGGGTGTGAAAATCACAAACAAGAATTCTCTTCTCACAAATGGTCTAGACATGAGAGATAACTCAAGCGAACATGTCCATCTTCAGCTCAGCCAACCGCAGCATGATGA
Protein Sequence
- >fgenesh2_kg.5__2158__AT3G57230.1
MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYEFSSSSMKSVIERYSDAKGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSVEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKVNLMHQQNKELHEKVSEVEGVKITNKNSLLTNGLDMRDNSSEHVHLQLSQPQHD