Information report for fgenesh2_kg.4__2847__AT2G46340.1
Gene Details
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Functional Annotation
- Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA1 is a PHYA signaling intermediate, putative regulator of PHYA signaling pathway. Light responsive repressor of photomorphogenesis. Involved in regulating circadian rhythms and flowering time in plants. Under constant light, the abundance of SPA1 protein exhibited circadian regulation, whereas under constant darkness, SPA1 protein levels remained unchanged. In addition, the spa1-3 mutation slightly shortened circadian period of CCA1, TOC1/PRR1 and SPA1 transcript accumulation under constant light.
Homologous
- Arabidopsis thaliana: AT2G46340
- Brassica napus: BnaA05G0015800ZS
Gene Resources
- Pfam: PF00069 PF00400 PF07714 PF17005
- UniProt: D7LDZ0
- RefSeq: XP_002882059.1
- EMBL: GL348716
- AlphaFoldDB: D7LDZ0
- InterPro: IPR000719 , IPR001680 , IPR011009 , IPR015943 , IPR019775 , IPR020472 , IPR036322 , IPR044630
- PANTHER: PTHR44218 , PTHR44218:SF6
- SUPFAM: SSF50978 , SSF56112
- PROSITE: PS00678 , PS50082 , PS50294
- Gene3D: 1.10.510.10 , 2.130.10.10
- eggNOG: KOG1033
- STRING: 81972.D7LDZ0
- HOGENOM: CLU_006994_1_0_1
Sequences
gDNA Sequence
- >fgenesh2_kg.4__2847__AT2G46340.1
GAGAATCTCCAACAACAATTACATAATTGAGCTAATGATATAACACACTTGTACAAGTTATATACCTCTCATCATTACACATTATGCCGACCAAATCTGAATCACTTCTGAAGAATCTGAGAAGTTATCTCAAATTATATCTCATATATATAGAATTACAGGAAGAAGAATCAAATAATATTACCACAGACAGTTTTGCTTCTTCAACTTCTCCAAGATTTCGATTTTTTTTTCTGTTCTGGTCATATAGGATCTAATTTCCAGGACAAAAACGTTGCTTCAAAGTCAAACTGGTTTGTCCTAGATTCAGACTCAAGAGATGAGGTTTTGAGATTTTTCCAAAGAACTTACTCAAAGAGTCCAATGCCCGTAGTAGTGAAAACGCCAAGTTGTCAAACAAGTTTTAGTAGCTTCATGTTTCCAGTAGAGTTTGCAGCTACAAGCATATTCGATTTTTTCCTCCAACAGACGCTCGACACAAACTGTCCATTGTCATCAAAGTATTCGTTTCCAGAAATGGGATCGACGGATCCAAACTTGTATGAAGTCATTGGCATCGGTAAGGATTTATAGTAACTATATACCTAAGATGCAAAATCAAAGTATTATAACTAACTGTAACATTAATATCATCATCAAGATGAATGGTAACAATTTAAGGCAGCTTCATAAACAAACTTAACGCAATTGACATATACCCATGAGAATCTAGAATTATGTATTCTAAAGGTTGATATTTTTTTGTTATAATGATGTGATAAGTATACCTCATTGGTCTCTGAACCACAAGCTATGTACCCGTCCAAAACCGACAATCCGACAAAATTCTGCACAGGTAAAGGATTATACATCAGAACTAACTAATGATGTTGGATGAGAAATTAAAGGTAGATAGAAAAGTTTTTAGGACTAACCTTCTGATTTGTATGTCCTTTATATGTCAATGAACAAGCACCAGGAGATAAACCAGAGGAATTTGTCTTGTTAAGATTCCAAAGCTTGAGAGAGTTATCAGTGGAAGCAGAAACAATGGTTTCTGAATCCATAAATTTAACATAACTCACCGCTTTCTCATGACCAGCCAATGTGCACCAAGGTGTTTTGACATACCGAAGATCATAGCAATAGACCTTGTAATCAGCTGACCCAAATGCCAATAAGTGATTGGAATAAGAAGAGAATTGCACGCAACACACATTTGCTGGACTCCAGATTGTGCCTAATGAACGTTTCTGCATAGCCAACAGAGAAGAAAATAAGTTTCACTACATGTGGATATTCATAAGTCTAAACAGAGAATCATGCTTTCTGGAGCTATACTGATTTGGAGTATTAAAAACAACAGATACATCAAACTTCTTGCAATATTAGGAGTTAAGAGAAAGAGCAGCACCTCATTGATGCTCCAAAGCTTCACCGAGCAGTCATCACTTCCACTGACAAATTTTGTCGGGTCAGATGGAGAAAAATCAACTGACCATGCTCTCTTTTGGTGTTCGGTGTACTGCGAAAATCCTTGTCCAGTCCCGGCATCCCAAATCTGCATTCACCAGCACCATAAAGTAAGAAAATGGCAAGTGAAAACCATGAAATATATGGCTCTATATCTCTATCCTGTCACAATATTAACATGTACACATCTCATGAGGCTGGTCCTATAGAGCCAAATGTGCAACAAATGATGGTAAATAAGAAAGATTCCAAACTTGACATAGATAGGTGAAACTTTTATACGCACCTGAACTACACCATCGTAGTCAGTCGAGGCCAAGTAGTTTTTGATGTAGCTATTCCAGCAAACACAGCTTAATTTAGATTTGTTGACCATCTCTACTAGTGGATAATGAACACCGACAGATTCATTCATAAATGCATTGAAGTCAAAAATCTTGATCTTCTTTGATATCCCAGCTGCTGCTATATGTTCCTCATCAGGGTCAAAACTCAATGAGCAGACCACACTTGCAGAGTTTAAAAGGTCCCCACTTCTTATTGTCCCACAGGTTTCGAACTTGCTATACCGAGCAAATTTGCACAACCCCTCGAAAAACACTTCCAGTTGATCTGAAGATTTTCCTTTGGTACTCATATCCTGATTTTCATTTTGGTTTTCAGAGCATCTGTCCCTGTCCTTTAGTACGATTTTTTCAGAACGGGTACTAGCAGCAGAACTCGACAAGTTGATTTGTGATCGCATGAAGAAATATGCATCTTCAAGTTGACGGATATTACTCATCAGCCTGTCTGTATTAGTACTTGGTACAAGCAAGACGCCAGAAGTTGTACAGTGCTCATCTAGGGGAGATGATTGCACCCTTCTTTCAATAGCTCCATGAGATCTCACCAGAGATACATTTGAAGAATATCTTCGCTCGGCCTCCTTGATATCATCCTCTAAGGTCTGGATATCTTGCAAAAGCTTAGATGCTTTTTTCTGCTTCTGCACTTCTAGAGTAGACAAAAAATGAAGTAAGAGCTCAGATATCTCCTCAGCAGCAGCAGTCGATTTAACTGAATCATCCTCACATATCAACTCTGACTTCAGTATATCTCTGTCACAGAAAGAGAAGAGACTGAGAACAGAAAAAGAAACAAGAAGATAATTCACACAGTGGCATGCCATTTTTTCTTCCCAATTACGAGGGAAAACATTAAATAAAATTGAAGGTATCCGGCAAAGAAATCTTAAAAACGACTATTTTAGCTAATGGAAGGTCTACACATTCTCCTTTGTACCACTCCTAGACTCCTAGTAAATATTCCCCTACATGATACATAAAAGAGTAGCACTCAGCTAACTACCTAGCTGTTGGTCGGGACGAGGGTTCAGGATGTAGAAGCCAAAGACAAAATCCAGCTTCCTTTGGGTATTTTGAGAGAAATGTTGGTGGGAGAATCCGATGGCGTAAATCTGCCATCATTGCAGCATGCATTTCACCGGACTCGCAATGGCATAGCAACTGAAACAACCAATGGTCAAGCTAGAGATGTCAGTAGGCGTCTTCACATGAAAGGATCAAACATGTAAACAAAAAAAAACTGACAAGTTAGATACTGCAGACTGGAAAATACTAGCTCTGGGGTTCAAAGTTCAAACTAGACTAAGAAATTTCACGAAAACGAAAGAAATGGAAACTACCCAAAGCCTGACAATCTAGTACACAGACAGAAAAATAAAAGAAAGAAGACCACATAAGCAGGATATGACACTACATAGTGTTTAAATGCAATGAAATGTTACAACCTTCGTGGTATTAAAGCAAACTAAAAATCTTATCACAACAATAAAACTGAGTATTTGTCCATACCTCAAACAGAAGAACACCAAGGGCATAAATATTTGATTTATCTCCGATATCTTCTCCATTAATCTCCTCTGGACAAGTATACCATTGCTCTTCTAGCCATGTGGACATAGACTGTTTTTTCGTCATTGAAGACACGCTTAAATTTTTGATATAGTCTTGCTGTTGAAGCTCGCAACTGTCTGGATTACGTGCATCAACAACATTTAAATCAATCACAGGGCTTTTCCTTTTGAAAGGTCTCCCGGTGGAAGTGGCCTGAAGTTGACTCCCTGGAGAATGCACATGCAAGTCCATTTTTCTTTTCTTTGAATCCCTACCTCCAATAGATGATTCCTGAACAACAGGCCTCCTCCTATTCAAATCTTCGTCAACACCTGAGTCTAGATCGTTCTTTCCAAAAGTACCAATATATCTAAGTTTCTTCGATGGAACTAAAGTGAAAAGGGATGGTCTCAAGTCTAGCAAGAATAATCCTTTTGAATGGGCTGAGTCAACCAGCTCCACCAGCTGCCTAAATAGACAAAGGCCATGTCTTTTCTCTCGTTTAGCATAACTTGATCTAAGAAACTCCCTCAAACTGATTCCAAAAGAAGATTTAGTATGATTTCCATCACCATGTGATACCATCCCATTTCCTTTGGGACTTGATTTTAGGGGTAACACATGGTGAGGAGTAGGCGACTTGCTACTATCCAACTGTTTTTCCTTGCTTCCTAAATCTTGGTCAGAGAAAAATTCAGGAGGAGACTCCTGGTTCTTTCCTACTACGCCTTTCCCCTTCATAGCTCTTTTAAGTAACAACTGAGAAAAATTGACAGGCGCGTTCAATTGGACACCTTCACTACTGATCAATGAAGGAGCTTTGATAATACTGTTCTCACCAGCTGCTCGTAGACGTTCAGAAAAAGCTTCAAGATTGTGATCGCTCCTCCTAGTCATAAAAGGTTTCAGGTTTTGCCTTTCGGAAGGAGCTCCAGCAAGCTGTTGTCTAATTCGTGACAACATTTGATCCATGTCACGAGGTTGAGAATCAAGATCCCCATCTCCTGGCCTTAGAGAAGACCCTCTAGCAAGACGATAAAGATGCTCAAACTTCCCAGCCCTAGAACTATCCATATTAGTATTATTAGTCCCTTGAACAATCCTATAGTTCCCCAATGTCAACTCTTCAACAGAAAGCTTAGCTCCAGCAGAATCCTCCGGAGGCGGCGGCTTAGTCATCTCAAGAGTCCTGTGAGCTGAGCTTCCAGGACAGTCACTGTTTCTAGTTTCTGATTGAATCACCATATTACTATGAAGAGCATCAAGCTTACAAGGAACATCATCCACTCGTCCTTTCAATTGTATGTTGTTGTTACTCGCCACAGTTTCTTCAGCTACTCTTTCCATAACAGGCATCCACATTCATTGCCACATGGAATGATAACAATCTACAGCCTCCATACCTTATACAAAAAACAAATCGAATCTCATCAGAATCAAGCCAACAAAAAGAAGAAGAAGAAGAAGCCCTACCTACTAAATTCATGCATGTTCAGATTCTAAAAACACACACAATAAATCACTAATCCCGAAACGTATCATCAGCTGTAATCTTAAGCAGCTAATCAGACGATTATATATGTAAAATTGCAGCAAACTAAAACCAATAATAAAAATTACGAGAAATACACAAAAATCTAAATCGCTTACCTCGAAGATCGAGAGATCATACACCGAAGCGGTGAATCCAAACGGTTCCAAGAAGAAGAAACCTCTTGAAGAAAGCAAATTCAAAAAGAAGAAGAAGAAAGGTGAGGCTATAAATTTGTCATATATTGATGATAATAATTACGAAAAACATAATGAATCTCTCTCTCTCTCTAGTCACACAAATATGAATCTCTCTTTCTCTA
CDS Sequence
- >fgenesh2_kg.4__2847__AT2G46340.1
ATGCCTGTTATGGAAAGAGTAGCTGAAGAAACTGTGGCGAGTAACAACAACATACAATTGAAAGGACGAGTGGATGATGTTCCTTGTAAGCTTGATGCTCTTCATAGTAATATGGTGATTCAATCAGAAACTAGAAACAGTGACTGTCCTGGAAGCTCAGCTCACAGGACTCTTGAGATGACTAAGCCGCCGCCTCCGGAGGATTCTGCTGGAGCTAAGCTTTCTGTTGAAGAGTTGACATTGGGGAACTATAGGATTGTTCAAGGGACTAATAATACTAATATGGATAGTTCTAGGGCTGGGAAGTTTGAGCATCTTTATCGTCTTGCTAGAGGGTCTTCTCTAAGGCCAGGAGATGGGGATCTTGATTCTCAACCTCGTGACATGGATCAAATGTTGTCACGAATTAGACAACAGCTTGCTGGAGCTCCTTCCGAAAGGCAAAACCTGAAACCTTTTATGACTAGGAGGAGCGATCACAATCTTGAAGCTTTTTCTGAACGTCTACGAGCAGCTGGTGAGAACAGTATTATCAAAGCTCCTTCATTGATCAGTAGTGAAGGTGTCCAATTGAACGCGCCTGTCAATTTTTCTCAGTTGTTACTTAAAAGAGCTATGAAGGGGAAAGGCGTAGTAGGAAAGAACCAGGAGTCTCCTCCTGAATTTTTCTCTGACCAAGATTTAGGAAGCAAGGAAAAACAGTTGGATAGTAGCAAGTCGCCTACTCCTCACCATGTGTTACCCCTAAAATCAAGTCCCAAAGGAAATGGGATGGTATCACATGGTGATGGAAATCATACTAAATCTTCTTTTGGAATCAGTTTGAGGGAGTTTCTTAGATCAAGTTATGCTAAACGAGAGAAAAGACATGGCCTTTGTCTATTTAGGCAGCTGGTGGAGCTGGTTGACTCAGCCCATTCAAAAGGATTATTCTTGCTAGACTTGAGACCATCCCTTTTCACTTTAGTTCCATCGAAGAAACTTAGATATATTGGTACTTTTGGAAAGAACGATCTAGACTCAGGTGTTGACGAAGATTTGAATAGGAGGAGGCCTGTTGTTCAGGAATCATCTATTGGAGGTAGGGATTCAAAGAAAAGAAAAATGGACTTGCATGTGCATTCTCCAGGGAGTCAACTTCAGGCCACTTCCACCGGGAGACCTTTCAAAAGGAAAAGCCCTGTGATTGATTTAAATGTTGTTGATGCACGTAATCCAGACAGTTGCGAGCTTCAACAGCAAGACTATATCAAAAATTTAAGCGTGTCTTCAATGACGAAAAAACAGTCTATGTCCACATGGCTAGAAGAGCAATGGTATACTTGTCCAGAGGAGATTAATGGAGAAGATATCGGAGATAAATCAAATATTTATGCCCTTGGTGTTCTTCTGTTTGAGTTGCTATGCCATTGCGAGTCCGGTGAAATGCATGCTGCAATGATGGCAGATTTACGCCATCGGATTCTCCCACCAACATTTCTCTCAAAATACCCAAAGGAAGCTGGATTTTGTCTTTGGCTTCTACATCCTGAACCCTCGTCCCGACCAACAGCTAGAGATATACTGAAGTCAGAGTTGATATGTGAGGATGATTCAGTTAAATCGACTGCTGCTGCTGAGGAGATATCTGAGCTCTTACTTCATTTTTTGTCTACTCTAGAAGTGCAGAAGCAGAAAAAAGCATCTAAGCTTTTGCAAGATATCCAGACCTTAGAGGATGATATCAAGGAGGCCGAGCGAAGATATTCTTCAAATGTATCTCTGGTGAGATCTCATGGAGCTATTGAAAGAAGGGTGCAATCATCTCCCCTAGATGAGCACTGTACAACTTCTGGCGTCTTGCTTGTACCAAGTACTAATACAGACAGGCTGATGAGTAATATCCGTCAACTTGAAGATGCATATTTCTTCATGCGATCACAAATCAACTTGTCGAGTTCTGCTGCTAGTACCCGTTCTGAAAAAATCGTACTAAAGGACAGGGACAGATGCTCTGAAAACCAAAATGAAAATCAGGATATGAGTACCAAAGGAAAATCTTCAGATCAACTGGAAGTGTTTTTCGAGGGGTTGTGCAAATTTGCTCGGTATAGCAAGTTCGAAACCTGTGGGACAATAAGAAGTGGGGACCTTTTAAACTCTGCAAGTGTGGTCTGCTCATTGAGTTTTGACCCTGATGAGGAACATATAGCAGCAGCTGGGATATCAAAGAAGATCAAGATTTTTGACTTCAATGCATTTATGAATGAATCTGTCGGTGTTCATTATCCACTAGTAGAGATGGTCAACAAATCTAAATTAAGCTGTGTTTGCTGGAATAGCTACATCAAAAACTACTTGGCCTCGACTGACTACGATGGTGTAGTTCAGATTTGGGATGCCGGGACTGGACAAGGATTTTCGCAGTACACCGAACACCAAAAGAGAGCATGGTCAGTTGATTTTTCTCCATCTGACCCGACAAAATTTGTCAGTGGAAGTGATGACTGCTCGGTGAAGCTTTGGAGCATCAATGAGAAACGTTCATTAGGCACAATCTGGAGTCCAGCAAATGTGTGTTGCGTGCAATTCTCTTCTTATTCCAATCACTTATTGGCATTTGGGTCAGCTGATTACAAGGTCTATTGCTATGATCTTCGGTATGTCAAAACACCTTGGTGCACATTGGCTGGTCATGAGAAAGCGGTGAGTTATGTTAAATTTATGGATTCAGAAACCATTGTTTCTGCTTCCACTGATAACTCTCTCAAGCTTTGGAATCTTAACAAGACAAATTCCTCTGGTTTATCTCCTGGTGCTTGTTCATTGACATATAAAGGACATACAAATCAGAAGAATTTTGTCGGATTGTCGGTTTTGGACGGGTACATAGCTTGTGGTTCAGAGACCAATGAGGTATATAGTTACTATAAATCCTTACCGATGCCAATGACTTCATACAAGTTTGGATCCGTCGATCCCATTTCTGGAAACGAATACTTTGATGACAATGGACAGTTTGTGTCGAGCGTCTGTTGGAGGAAAAAATCGAATATGCTTGTAGCTGCAAACTCTACTGGAAACATGAAGCTACTAAAACTTGTTTGA
Protein Sequence
- >fgenesh2_kg.4__2847__AT2G46340.1
MPVMERVAEETVASNNNIQLKGRVDDVPCKLDALHSNMVIQSETRNSDCPGSSAHRTLEMTKPPPPEDSAGAKLSVEELTLGNYRIVQGTNNTNMDSSRAGKFEHLYRLARGSSLRPGDGDLDSQPRDMDQMLSRIRQQLAGAPSERQNLKPFMTRRSDHNLEAFSERLRAAGENSIIKAPSLISSEGVQLNAPVNFSQLLLKRAMKGKGVVGKNQESPPEFFSDQDLGSKEKQLDSSKSPTPHHVLPLKSSPKGNGMVSHGDGNHTKSSFGISLREFLRSSYAKREKRHGLCLFRQLVELVDSAHSKGLFLLDLRPSLFTLVPSKKLRYIGTFGKNDLDSGVDEDLNRRRPVVQESSIGGRDSKKRKMDLHVHSPGSQLQATSTGRPFKRKSPVIDLNVVDARNPDSCELQQQDYIKNLSVSSMTKKQSMSTWLEEQWYTCPEEINGEDIGDKSNIYALGVLLFELLCHCESGEMHAAMMADLRHRILPPTFLSKYPKEAGFCLWLLHPEPSSRPTARDILKSELICEDDSVKSTAAAEEISELLLHFLSTLEVQKQKKASKLLQDIQTLEDDIKEAERRYSSNVSLVRSHGAIERRVQSSPLDEHCTTSGVLLVPSTNTDRLMSNIRQLEDAYFFMRSQINLSSSAASTRSEKIVLKDRDRCSENQNENQDMSTKGKSSDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDPDEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKNYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINEKRSLGTIWSPANVCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKFMDSETIVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTNQKNFVGLSVLDGYIACGSETNEVYSYYKSLPMPMTSYKFGSVDPISGNEYFDDNGQFVSSVCWRKKSNMLVAANSTGNMKLLKLV