Information report for fgenesh2_kg.4__2461__AT2G43010.2
Gene Details
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Functional Annotation
- Isolated as a semidominant mutation defective in red -light responses. Encodes a nuclear localized bHLH protein that interacts with active PhyB protein. Negatively regulates phyB mediated red light responses. Involved in shade avoidance response. Protein abundance is negatively regulated by PhyB.
Homologous
- Arabidopsis thaliana: AT2G43010.2, AT2G43010, AT2G43010.1
- Brassica napus: GSBRNA2T00139104001
- Brassica oleracea: XP_013622129.1, XP_013622128.1, Bo3g036300
- Brassica rapa: XP_009133563.1, XP_009133562.1, Bra000283
- Raphanus raphanistrum: RrC2388_p6
Gene Resources
- Pfam: PF00010
- UniProt: D7LJW8
- RefSeq: XP_002880016.1
- EMBL: GL348716
- AlphaFoldDB: D7LJW8
- InterPro: IPR011598 , IPR036638 , IPR044273 , IPR047265
- PANTHER: PTHR46807 , PTHR46807:SF7
- SUPFAM: SSF47459
- PROSITE: PS50888
- Gene3D: 4.10.280.10
- CDD: cd11445
- eggNOG: ENOG502QTIX
- STRING: 81972.D7LJW8
- HOGENOM: CLU_030314_1_1_1
Sequences
gDNA Sequence
- >fgenesh2_kg.4__2461__AT2G43010.2
CTTTCTGTCTGTACCCAAAAGAAGTAAAGAACCTCTCTTATCATCTTCTTCTCTGTTTCTTTCATGTTTTGTGAGAGTTTTCTCAACAATTTCTTGGTCTCTTTAGAGTGAGAGAAACGAGATAGAGGAGAGATCTTCTCCTTCTACTTCTGATTCGTCCAGAAGCTTTCCTAATCTGGTTAGTGTAGTAGTCTTTATACGGTCTTTGGTTTTATAAGATGTTGCTATATTTGGAAATAACTATTTTTCAAGCTTTCCTAGATTGCTGGGATATAAAAAGATGTTTAACAAGATAACTAACTCATGGACTTGCTTTCAATTTTAATTATTTTAAAATCATTCTATAATGATTAGAGAGGAATAAACTATTGGGATTCTGAATAATAAAATCAGACTTTATGCTCCTCCGTGTGTTTCTCTTAATCATACGTTATCATTAGCTCTGTTCACTTGTTTTTCCTCTGTTCCTAATTGTATGATGTTTCGAGATTTTCACACATATTAAGAATTCAATCATTGTTTAATCATTTGAACATTAATTTTGATATTACATATTTTAAAATAATTATCAACCAACAGTAATTTAAGAAAGTTAATTATTTTCAATCATTACGCCTTAAAGTTTACGATTTATTAATATAAATCGATAAAAATAAAGAAAAAGCTAGAAAATCAATATTTGTGAGACAAATAACAAAAGCTAAAACATCAATCTTTTAGTAACAGATGGAGTATAAAATATATTATGAGGTTAATAAAAAAAGTTGTTTTTTTTTCTTTTGAAATGTCTCCAGAGATCTGACATGGAACACCAAGGTTGGAGTTTTGAGGAGAATTATAGTTTGTCCACTAATAGAAGATCTATAAGGTAGTATTATATAATAATCTTTGATCTAATGTATCATTCATTTTCAAAAAAACTATATAATATAGTCTCTGTGTGTATTTATGTCTAGGCCACAAGATGATCTAGTGGAGTTGTTATGGCGAGATGGGCAAGTGGTTCTGCAGAGCCAAACTCATAGAGAACAAACCCAAACCCAGAAACAAGATCATCATGAAGGAACCCAAAGATCCAACATCTTCCTTGAAGATCAAGAAACTGTGTCTTGGATCCAATACCCTCCAGATGAAGACCCATTCGAAACCGACGACTTCTCCTCCCACTTCTTTTCAACCGTCGATCCCCTCCAGAGACCAACCTCAGAGACGATTAAGCCTAAGTCTGGTCCTGACCCTCCTCACGTCATGGTTAAGCCTAAGGCCTGTCCTGACCCTCCTCAAGTCATGCCTCCCCCTAAATTTAGGTTAACAAATTCGTCATCGGGTATTCGGGAAACAGAAATGGAACAGTACTCGGAAACGACAATTGGACCTAGCCATTGCGGGAGCAACCCATCCCAAAACGATTTTGATGCCTCAATGAGTCAAGATCGAAGCAAAAACATAGAAGAAAAGCTTAACCCGAACGCAAGTTCCTCATCGGGTGGCTCCTCTGGTTGCAGCTTTGGCAAGGATATCAAAGAAATGGCTTGTGGAAGAAGCATCACAACAGACCGTAAGAGAAAACATATAATGGACACTGATGACTCTGTATCTCTATCAGATGTATGCTTCCTTTAATCCTAACTCATGATGATAACTTCTTGAAAACGAAATTTTGATTCATCTCTCAGAGTTCTTGATTGCTTGTATAATACGTTTTGTAGGCAATCGGTGGTAACAAGTCGAACCAACGATCAGGATCAAACCGAAGGAGTCGAGCAGCTGAAGTTCATAATCTCTCCGAAAGGGTACTTCATCGGTTCGTCTATATATATAATATAGAGTTAATGTTAGAAAATCATATAGTAACATTTATACAAAGAAAACAGATACAAAACTGTGTTTTTTTCTTTTCTTCTTTTCTAAACTTAGAGGAGGAGAGATAGGATCAATGAGAGAATGAAGGCTCTGCAAGAACTAATACCTCACTGCAGTAAAGTAAGTTGATAAATCAAATCTAAAAGTGAATCATATATGAAGATTTGATTTATTCATTGGTTTGTTTTTGCAGACTGATAAAGCTTCGATTTTAGACGAAGCCATAGATTATTTGAAATCACTTCAGTTACAACTTCAAGTGATGTGGATGGGGAGTGGAATGGCGGCGGCTCCGATGATGTTCCCCGGAGTTCAACCTCCGCCGTTCATACGTCAGATGCAGAGTCCGGTACAGTTACCTCGATTTCCGGTTATGGAACGGTCTGCAATTCAGAACAATCCCGGTTTAGTTTGTCAGAACCCGATACAAAACCAGATAATCTCCGACCGGTTTGCTAGGTACATCGGTGGGTTCCCACAGATGCAGGCCGCGGCTCAGGTAAGGCCAATACGACGCCGTGTTTATTAAACGACGATTTTGGTAACATGTTTTATGGGTTAGGCAGGTTACTATATTAATATGACGCTGTTCACAAATAATGTTTAAACGACGTAGTTTTAATTGACACGTGGTGTGGTTTTTGATTAGATGCAGCCGATGGAGATGTTAAGATTTGGTTCACCGGCGGGACAGCAAAGTCAACAACCGCCTGCGCCGACGAAGACCACCGATGGTTCTCGTTTGGGCCACTAGGTTGGTGAGGCACTTTTTTACTTCCTTATTTTTGGTATGTTTGTTTTTCTTATCTATTTATGAACATACTTAAAACGCAAGGGTGTATTATTTATAGAGTACAACGTACAACTTCATTACGTTATTTTATGTATGAGTTTATGTATGTCAAAATGACATGATGAGATTTTTTGTAAACAACATGTTAAAAA
CDS Sequence
- >fgenesh2_kg.4__2461__AT2G43010.2
ATGGAACACCAAGGTTGGAGTTTTGAGGAGAATTATAGTTTGTCCACTAATAGAAGATCTATAAGGCCACAAGATGATCTAGTGGAGTTGTTATGGCGAGATGGGCAAGTGGTTCTGCAGAGCCAAACTCATAGAGAACAAACCCAAACCCAGAAACAAGATCATCATGAAGGAACCCAAAGATCCAACATCTTCCTTGAAGATCAAGAAACTGTGTCTTGGATCCAATACCCTCCAGATGAAGACCCATTCGAAACCGACGACTTCTCCTCCCACTTCTTTTCAACCGTCGATCCCCTCCAGAGACCAACCTCAGAGACGATTAAGCCTAAGTCTGGTCCTGACCCTCCTCACGTCATGGTTAAGCCTAAGGCCTGTCCTGACCCTCCTCAAGTCATGCCTCCCCCTAAATTTAGGTTAACAAATTCGTCATCGGGTATTCGGGAAACAGAAATGGAACAGTACTCGGAAACGACAATTGGACCTAGCCATTGCGGGAGCAACCCATCCCAAAACGATTTTGATGCCTCAATGAGTCAAGATCGAAGCAAAAACATAGAAGAAAAGCTTAACCCGAACGCAAGTTCCTCATCGGGTGGCTCCTCTGGTTGCAGCTTTGGCAAGGATATCAAAGAAATGGCTTGTGGAAGAAGCATCACAACAGACCGTAAGAGAAAACATATAATGGACACTGATGACTCTGTATCTCTATCAGATGTAATCGGTAACAAGTCGAACCAACGATCAGGATCAAACCGAAGGAGTCGAGCAGCTGAAGTTCATAATCTCTCCGAAAGGAGGAGGAGAGATAGGATCAATGAGAGAATGAAGGCTCTGCAAGAACTAATACCTCACTGCAGTAAAACTGATAAAGCTTCGATTTTAGACGAAGCCATAGATTATTTGAAATCACTTCAGTTACAACTTCAAGTGATGTGGATGGGGAGTGGAATGGCGGCGGCTCCGATGATGTTCCCCGGAGTTCAACCTCCGCCGTTCATACGTCAGATGCAGAGTCCGGTACAGTTACCTCGATTTCCGGTTATGGAACGGTCTGCAATTCAGAACAATCCCGGTTTAGTTTGTCAGAACCCGATACAAAACCAGATAATCTCCGACCGGTTTGCTAGGTACATCGGTGGGTTCCCACAGATGCAGGCCGCGGCTCAGCCGATGGAGATGTTAAGATTTGGTTCACCGGCGGGACAGCAAAGTCAACAACCGCCTGCGCCGACGAAGACCACCGATGGTTCTCGTTTGGGCCACTAG
Protein Sequence
- >fgenesh2_kg.4__2461__AT2G43010.2
MEHQGWSFEENYSLSTNRRSIRPQDDLVELLWRDGQVVLQSQTHREQTQTQKQDHHEGTQRSNIFLEDQETVSWIQYPPDEDPFETDDFSSHFFSTVDPLQRPTSETIKPKSGPDPPHVMVKPKACPDPPQVMPPPKFRLTNSSSGIRETEMEQYSETTIGPSHCGSNPSQNDFDASMSQDRSKNIEEKLNPNASSSSGGSSGCSFGKDIKEMACGRSITTDRKRKHIMDTDDSVSLSDVIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVMWMGSGMAAAPMMFPGVQPPPFIRQMQSPVQLPRFPVMERSAIQNNPGLVCQNPIQNQIISDRFARYIGGFPQMQAAAQPMEMLRFGSPAGQQSQQPPAPTKTTDGSRLGH